mRNA_Ecto-sp13_S_contig19155.6113.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: D7FWD7_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD7_ECTSI) HSP 1 Score: 671 bits (1730), Expect = 1.250e-235 Identity = 371/395 (93.92%), Postives = 380/395 (96.20%), Query Frame = 1
Query: 1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDMRNAKDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREWRSSTVLVREPVDHRNKSSVWLEDAEEGGEEAGTGGEWEGGCFKSILSRKQDAAGQHASASDGVPSALFL 1185
CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXX VATDLVRVVDGD S KDAR+LKGRLSR AFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQ+FLN LTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALD+R+AKDLQKADRDRL NLQPLGDLWEAYKPSRYYYEIIEYVRRI+LTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREWRSSTV REPVD R+KSS WLEDAEEGGEEAGTGGEWEGGCF+SILS KQDAAGQ+ SAS+GVPSAL L
Sbjct: 387 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXAVVATDLVRVVDGDRSIKDARTLKGRLSRFQAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNVLTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDLRHAKDLQKADRDRLPNLQPLGDLWEAYKPSRYYYEIIEYVRRIMLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREWRSSTVSEREPVDPRSKSSGWLEDAEEGGEEAGTGGEWEGGCFQSILSSKQDAAGQNVSASNGVPSALLL 781
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 512 bits (1318), Expect = 3.240e-170 Identity = 305/411 (74.21%), Postives = 316/411 (76.89%), Query Frame = 1
Query: 1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDMR-----------------------------------------------------------------------------NAKDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREWRSSTVLVR 1002
CSVCADGYAPGTAYQCHECSGTSMGSAVG+A XXXXXXXXXX VA DLVRVVDGD S KDAR+LKGRLSR HAFVV AFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQ+FLNALTPVNLDIGFILSYSC V TDFFDRLLIATIGPVVVLALLALTFVVGRKRNI+SEAAVRA+ + N +DLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQ+AVVLLLAVVFLFISESLSPF KKIDMALYRWGNGV+LAS+YVALLLKVNVSEEGSETLSAFVVVLILANV M IT+VVQSFLLVREWRSSTV R
Sbjct: 628 CSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKDARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFLLVREWRSSTVSAR 1038
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 248 bits (634), Expect = 1.090e-69 Identity = 160/409 (39.12%), Postives = 217/409 (53.06%), Query Frame = 1
Query: 1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVD------GDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDMR-----------------------------------------------------------------------------NAKDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREW 978
C+VCA GY+PG + C C G S SA+ AA + + LV VV+ ++ + S L A V PLT VKIVVV WQI+TQ+ +AG YP YQ+FL+ + VNLD+GFILS++C T+F+DRLL+ATIGPV+VL LL T+VV R+RN + E A+R + R N +L++ DR+ A L+P DLWE YKPS YYYE++E RRI LTG AVF+ P SSAQ+A+VLLLA VF+ +SE LSPFA+ ++M LYR G+ V+ ASMY+ALLL+V+VS+E ++ F V+++A+V M + VVVQ L+ W
Sbjct: 611 CAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLLIFVGW 1019
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 247 bits (631), Expect = 2.750e-69 Identity = 157/404 (38.86%), Postives = 217/404 (53.71%), Query Frame = 1
Query: 1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVD-GDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRALDMR-----------------------------------------------------------------------------NAKDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREW 978
C+VC+ GY+PG + C C G S SA+ AA + + LV VV+ G + ++ + S A V PLT VKIVVV WQI+TQ+ +AG YP YQ+FL+ + VNLD+GFILS++C T+F+DRLL+ATIGPV+VL LL T++V R+RN + E A+R + R N +L++ DR+ A L+P DLWE YKPS YYYE++E RRI LTG AVF+ P SSAQ+A+VLLLA VF+ +SE LSPFA+ ++M LYR G+ V+ ASMY+ALLL+V+VS+E ++ F V+++A+V M + VV Q L+ W
Sbjct: 635 CAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLLIFVGW 1038
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 227 bits (579), Expect = 1.340e-62 Identity = 153/409 (37.41%), Postives = 212/409 (51.83%), Query Frame = 1
Query: 1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRA--------------------------------LD---------------------------------------------MRNAKDLQKADRD--------RLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVR 972
C+VC +GYA G + C C G ++ SA+G + V DLVRVVD + A + RL+ +V A PLT++KIVVVAWQI+TQF ++ VYP+ Y++FL L VN D+GF+LS SC V +F+ RL T+GP+VV LA T+ + R RN +S A ++A LD + N DL K RL +LQP+ DLW +YKP RYY+E++E RRI LTG+A F+LP S+AQ+A+ ++LA +F+ +S+ LSPFA D LYR G +I SMY+ALLLKV+ S+E S++ +AF VLI A+V MV+ V+VQ+ L VR
Sbjct: 657 CAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVD-EVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPRLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSVR 1064
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 226 bits (577), Expect = 4.150e-62 Identity = 146/392 (37.24%), Postives = 211/392 (53.83%), Query Frame = 1
Query: 1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFV---VGRKRNIN--------------------------------------------SEAAVRALD-------------------MRNAKDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREW 978
C+VC G++PG + C C G S A + + +A LV VV+ S+K + + S A + PLT +KIVVV WQI+TQ+ +AG YP Y++FL+ + VNLD+GFILS +C TDF+DRLL+ TI P VVL LL T++ V + R+++ + A R ++ +L++ R+R A L+P DLWE YKPS YYYE++E RRI LTG AVF+ P SSAQ+A+VLLLA+VF+ +SE LSPFA+ ++M LYR G+ V+ ASMY+ALLL+V+VS+E +++ F VL++A+ M++ VV+Q L+ W
Sbjct: 641 CAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYLAMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAVLKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLLIFAGW 1032
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 205 bits (522), Expect = 2.630e-58 Identity = 141/365 (38.63%), Postives = 191/365 (52.33%), Query Frame = 1
Query: 133 VATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRA--------------------------------LD---------------------------------------------MRNAKDLQKADRD--------RLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVR 972
V +LVRVVD D +T + L+ L + N PLT++KIV+VAWQI+TQF ++ VYP+ Y+ FL+ L VN + GFILS SC V T+F+ RLL ATIGP+VVL LALT+ V R RN +S A ++ LD + N DL K D + L NLQP+ DLW YKP RYY+E++E RRI LTG+AVF+ PGS+AQ+A+ ++ A F+ IS+ LSPFA +D LYR G VI SM++ LLLKV+ S+E S++ F +LI A+V MV+ + VQ+ L V+
Sbjct: 25 VIANLVRVVDDD-NTGTVSACGKTLNSLRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSVK 388
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 184 bits (466), Expect = 4.540e-50 Identity = 143/432 (33.10%), Postives = 200/432 (46.30%), Query Frame = 1
Query: 133 VATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVR-ALDMR----------------------------------------------------------------------------NAKDL---QKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVR----EWRSSTVLVREPVDHRNKSSVWLEDAEEGGEE--AGTGGEWEGGCFKSILSRK-QDAAGQHASASDGV 1167
V DLVRVVD TK R + A PLT +KI++V WQI+TQF ++ YPE Y+ FL AL VN ++G+ LS+ C V T+F+ RL +TI P+ +L LA + ++ N +S+ +R A D N KDL + NL+P+ DLWE YKP RY+YE++E RRIVLTG+AVF+ PG++AQ+A+ + A L + E L+PF +D LYR G V+ SMY+ALLLKV+ S+E SE+ F VL+ A+V MV+ V++ S L + E V VR+ RN S W G EE +G WE + L+ + Q+ + ASDG
Sbjct: 4 VIVDLVRVVDDGDGTKSRVGKWERFLSCRDAIAAAIPLTAIKIILVVWQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVQDRSGGTTTPENLRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLLSAKKVGIEAMRKQVEVRDVPVARNTRSSWRASETLGAEEEPGESGDNWEPRLGLAALTEQPQEYQNEGNGASDGT 435
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 190 bits (482), Expect = 1.740e-49 Identity = 135/401 (33.67%), Postives = 197/401 (49.13%), Query Frame = 1
Query: 1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRN------------------------------------------INSEAAVRA-----LDMRNAKDLQK--------------------------------ADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLL 966
CS+C+DGY G +++C ECS ++ G + LA+ V + +V G+GS +G + RL ++ PL + KIVVV+WQI+TQF A+A YP+ YQ FL+ L N D+ ++LS C V DF DRLLI+TIGP+V L L T+ + N + E +RA D K LQ ADR+ A + +LW+ YKPS +YYE+IE RR++L GV VF+ P ++ QIA+ LL+A F+ +SE L+P+A + D L R G+ V+ SMYVALLLKV+VS E E+ F VVL+ A+ M++ +V+++ +L
Sbjct: 1656 CSICSDGYTAGLSFKCSECSDSAGG--IILASFLAVVALLVAVAVVSYVVSDKVGEGS-------RGTVERLGRYI----PLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVL 2043
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 187 bits (475), Expect = 1.420e-48 Identity = 134/407 (32.92%), Postives = 200/407 (49.14%), Query Frame = 1
Query: 1 CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXXXVATDLVRVVDGDGSTKDARSLKGRLSRLHAFVVNAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQNFLNALTPVNLDIGFILSYSCFVTTDFFDRLLIATIGPVVVLALLALTFVVGRKRNINSEAAVRAL------------------------------DMRNAKDLQKAD--------------------------------------------------RDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQIAVVLLLAVVFLFISESLSPFAKKIDMALYRWGNGVILASMYVALLLKVNVSEEGSETLSAFVVVLILANVFMVITVVVQSFLLVREWR 981
CSVC++GY+ A+ C EC + G+A +A + V G + AR +G + R VV PL ++KIVVV WQI+TQF ++A YP+ YQ FL+ + +N D+ +I S C V DF RLL+ATIGP+V LALLA+T+ V ++R+ SEAA++ + D+ + K +AD R +QP+ DLW YKP R+YYE+IE VRR+ LTGV VF+ P ++AQ+AV L++A F+ S L+P+ K D ++ G+ ++ SMY ALL KV+VS+E +++ F VL+ A+ MV+ VVV++ ++ WR
Sbjct: 1364 CSVCSEGYSMSLAFTCTEC----VDDHGGIAIMVVVGVFVLGAAIALCMHLV---SGEMEGAR--RGVIHR----VVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYSWR 1757 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19155.6113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19155.6113.1 >prot_Ecto-sp13_S_contig19155.6113.1 ID=prot_Ecto-sp13_S_contig19155.6113.1|Name=mRNA_Ecto-sp13_S_contig19155.6113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=396bp CSVCADGYAPGTAYQCHECSGTSMGSAVGLAAAVVAVVLLVVVVVATDLVback to top mRNA from alignment at Ecto-sp13_S_contig19155:98..1785+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19155.6113.1 ID=mRNA_Ecto-sp13_S_contig19155.6113.1|Name=mRNA_Ecto-sp13_S_contig19155.6113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1688bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19155:98..1785+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19155:98..1785+ >mRNA_Ecto-sp13_S_contig19155.6113.1 ID=mRNA_Ecto-sp13_S_contig19155.6113.1|Name=mRNA_Ecto-sp13_S_contig19155.6113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1188bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19155:98..1785+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |