mRNA_Ecto-sp13_S_contig1911.6089.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1911.6089.1
Unique NamemRNA_Ecto-sp13_S_contig1911.6089.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1911.6089.1 vs. uniprot
Match: D7FI51_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI51_ECTSI)

HSP 1 Score: 606 bits (1562), Expect = 5.620e-217
Identity = 307/330 (93.03%), Postives = 316/330 (95.76%), Query Frame = 1
Query:    1 MPAHCTTALVLLGLPLGIQGFVPLLAKNAAGANSGAVTTPTSGTTAATTGCRRWQHEHRIASGPSSSCAAPPAHALRAAPRPASPASLPEYFMALFGGNKGSSITKTSKAEELEADLLSAIEGVQGRGREVTQDQRELVDKAVEALENDGGLPKAASSPVVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSEVPPTVTNVVDFGPRVGQLRVTALASTPFRPMEGFVPRKGDGRFFGLNILGVSQTTPPEDPSRRIDFQFDEAGFDFKALPFNIPYPVPFRLFGDEVKGWIDVTYLSKRLRIARGNKGTLFVLQRPPSPPPP 990
            M AHCTTALVLLGLPLGIQGFVP LA NAAGAN+GA TTPT GTTAA TGCRRWQHEHRIASG SSSC APPAHA RAAPRPASPASLPEYFMALFGGNKGSS T+ SKAEELEADLLSAI+GVQGRGR+VTQ+QRELVDKAVEALE+DGG P AASSP+VDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSEVPPTVTNVVDFGPRVGQLRVTALASTP RPMEGFVPRKGDGRFFGLNILGVSQTTPPEDPSRRIDFQFDEAGFDF+ALPFNIPYPVPFRLFGDEVKGWIDVTYLS+RLRIARGNKGTLFVLQRPPSPPPP
Sbjct:    1 MLAHCTTALVLLGLPLGIQGFVPSLANNAAGANNGAATTPTPGTTAAATGCRRWQHEHRIASG-SSSCRAPPAHAHRAAPRPASPASLPEYFMALFGGNKGSSATRASKAEELEADLLSAIKGVQGRGRDVTQEQRELVDKAVEALESDGGAPNAASSPLVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSEVPPTVTNVVDFGPRVGQLRVTALASTPSRPMEGFVPRKGDGRFFGLNILGVSQTTPPEDPSRRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSERLRIARGNKGTLFVLQRPPSPPPP 329          
BLAST of mRNA_Ecto-sp13_S_contig1911.6089.1 vs. uniprot
Match: A0A835Z824_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z824_9STRA)

HSP 1 Score: 261 bits (668), Expect = 4.520e-83
Identity = 129/206 (62.62%), Postives = 155/206 (75.24%), Query Frame = 1
Query:  376 GRGREVTQDQRELVDKAVEALENDGGLPKAASSPVVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLF-SEVPPTVTNVVDFGPRVGQLRVTALASTPFRPMEGFVPRKGDGRFFGLNILGVSQTTP---PEDPSRRIDFQFDEAGFDFKALPFNIPYPVPFRLFGDEVKGWIDVTYLSKR----LRIARGNKGTLFVLQR 969
            GRG+ V   Q+E VD  +  LE  GG+P  A +  +DG WRL++T+TPGTASP+QRSFV VD F+IYQ+I L+ ++ P TV NVVDFG RVG+L V ALAST  RP++GFVPR+GDGR  GLN+ GVSQT     P  P  RIDF+FD+AGFD K LPF IPYPVPFR+ GDEVKGWID+TYLS++    LRIARGNKGT FVL R
Sbjct:    3 GRGKGVEGAQKERVDSLIAELEASGGVPDGACADSIDGVWRLLYTSTPGTASPIQRSFVSVDAFSIYQNIALYGADAPATVANVVDFGARVGRLEVAALASTARRPLDGFVPRRGDGRILGLNVFGVSQTAEEGAPRRPGARIDFKFDDAGFDLKLLPFRIPYPVPFRILGDEVKGWIDITYLSRQPEGGLRIARGNKGTTFVLVR 208          
BLAST of mRNA_Ecto-sp13_S_contig1911.6089.1 vs. uniprot
Match: A0A4D9CNY0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNY0_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.040e-75
Identity = 128/249 (51.41%), Postives = 166/249 (66.67%), Query Frame = 1
Query:  241 RPASPASLPEYFMALFGGNKGSSITKTSKAEELEADLLSAIEGVQGRGREVTQDQRELVDKAVEALENDGGLPKAASSPVVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLF----SEVPPTVTNVVDFGPRVGQLRVTALASTPFRPMEGFVPRKGDGRFFGLNILGVSQTTPPED--PSRRIDFQFDEAGFDFKALPFNIPYPVPFRLFGDEVKGWIDVTYLSKRLRIARGNKGTLFVLQR 969
            +P +P SLP   +A +    G+S          E  LL AI+G+  R  + +   +  V   ++ LE   G+PKA ++  ++G WRL++T++  TASP+Q +FVG   FA+YQDID+     S  P TVTN+VDFG  +G L V ALASTP RP+  F PR GDGRFFGLNILG+S+T  P D  P  RIDF+FD AGFD   LPF IPYPVPFRL  DEVKGW++VTYLS RLR++RGNKGT+FVL++
Sbjct:   31 KPPTPTSLPAA-LASWPLTLGASRKSPRVLPNTENSLLQAIQGLDRREVQNSVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQDIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPARPIPNFAPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLSGRLRVSRGNKGTIFVLEK 278          
BLAST of mRNA_Ecto-sp13_S_contig1911.6089.1 vs. uniprot
Match: A0A6V1SXP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SXP2_HETAK)

HSP 1 Score: 244 bits (624), Expect = 1.780e-75
Identity = 121/207 (58.45%), Postives = 144/207 (69.57%), Query Frame = 1
Query:  349 LLSAIEGVQGRGREVTQDQRELVDKAVEALENDGGLPKAASSPVVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSEVPPTVTNVVDFGPRVGQLRVTALASTPFRPMEGFVPRKGDGRFFGLNILGVSQTTPPEDPSRRIDFQFDEAGFDFKALPFNIPYPVPFRLFGDEVKGWIDVTYLSKRLRIARGNKGTLFVLQR 969
            LL  +  +  RG        E V + V  LE   G+P  A  P ++G WRL+ TTTPGTASP+QRSFVG   F+++QDIDL     PTV NVV+FG  +G L V ALAST  RP+ GFVPR+GDG+  GLNI GVS T PP +P +RIDF+FD A FDF  LPF IPYPVPFR  GDEV GWID+TYLS+ LRIARGNKGT F+LQ+
Sbjct:   68 LLETLAALTRRGAGADAAAAERVAEQVAVLERTQGIPDPADYPGLNGRWRLLHTTTPGTASPIQRSFVGAAAFSVFQDIDLARPDRPTVANVVEFG-SLGVLTVEALASTAARPLPGFVPRRGDGKILGLNIFGVSSTEPPANPKQRIDFKFDYAAFDFNFLPFAIPYPVPFRYLGDEVTGWIDITYLSESLRIARGNKGTTFILQK 273          
BLAST of mRNA_Ecto-sp13_S_contig1911.6089.1 vs. uniprot
Match: A0A7R9VSS3_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VSS3_9CHLO)

HSP 1 Score: 240 bits (612), Expect = 1.140e-71
Identity = 124/238 (52.10%), Postives = 160/238 (67.23%), Query Frame = 1
Query:  268 EYFMALFGGNKGSSITKTSKAEELEADLLSAIEGVQGRGRE-VTQDQRELVDKAVEALENDGGLPKAA-SSPVVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSEVPPTVTNVVDFGPRVGQLRVTALASTPFRPMEGFVPRKGDGRFFGLNILGVSQTTPPEDPSRRIDFQFDEAGFDFKALPFNIPYPVPFRLFGDEVKGWIDVTYLSK--RLRIARGNKGTLFVLQR 969
            E F  L    +  S     K  + +A +L A+ GV+GRG+  ++++QR  ++ AVE LE DGG+ K      ++DG WRL+FT+ PGTASP+Q +F GV+ F+++QD+ L  E  P + NVVDFGP VG LRV ALAST  +P+EGF PRKG G    L   G S   PP+ P  RIDFQFD+A F FK +PF IPYPVPFRL GDE KGW+DVTY+S+    R++RGNKGTLFVL R
Sbjct:   34 EDFKTLSLRRRSGSRGPVGKVSDAQATILQALTGVKGRGKSGLSEEQRAAINAAVELLEADGGVGKPTRDEQLLDGRWRLLFTSRPGTASPIQNTFTGVEAFSVFQDVQLRGE-QPRIDNVVDFGPDVGYLRVEALASTDNKPLEGFTPRKGAG----LPFFGKSFVYPPQKPDMRIDFQFDKAAFYFKKVPFTIPYPVPFRLLGDETKGWLDVTYISRDGNFRLSRGNKGTLFVLVR 266          
BLAST of mRNA_Ecto-sp13_S_contig1911.6089.1 vs. uniprot
Match: A0A5J4YBD5_9CHLO (Putative plastid-lipid-associated chloroplastic-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YBD5_9CHLO)

HSP 1 Score: 238 bits (608), Expect = 5.400e-71
Identity = 121/227 (53.30%), Postives = 155/227 (68.28%), Query Frame = 1
Query:  310 ITKTSKAEELEADLLSAIEGVQGRGRE-VTQDQRELVDKAVEALENDGGLPKAASSPVVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSEVPPTVTNVVDFGPRVGQLRVTALASTPFRPMEGFVPRKGDGRFFGLNILGVSQTTPPEDPSRRIDFQFDEAGFDFKALPFNIPYPVPFRLFGDEVKGWIDVTYLSK--RLRIARGNKGTLFVLQRPPSP 981
            + K S  +E    LL AI  V+GRG+  ++ +Q   ++ AVE+LE D G+     SP+++G WRL+FTT PG+ASP+Q++FVGVD F +YQD+ L S     V N+VDFG +VG L+V A AST      GFVPR+  G    L + G S  TPP  P+ R+DFQFD+A F F ALPF IPYPVPF+L GDE KGWIDVTYLS+  +LR+ RGNKGTLFVL + PSP
Sbjct:   54 VIKRSSVKEARESLLGAITDVKGRGKSGMSPEQLSKLEAAVESLEADRGVSDPTKSPLLEGRWRLLFTTRPGSASPIQKTFVGVDAFTVYQDVLLSSAEKVRVNNIVDFGAKVGTLKVEAEASTDSNTRPGFVPRQKPG----LAVFGKSSNTPPVHPNMRVDFQFDKAAFAFSALPFKIPYPVPFKLLGDETKGWIDVTYLSQDGKLRLTRGNKGTLFVLLKDPSP 276          
BLAST of mRNA_Ecto-sp13_S_contig1911.6089.1 vs. uniprot
Match: A0A2P6VFQ7_9CHLO (Putative plastid-lipid-associated chloroplastic isoform X1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFQ7_9CHLO)

HSP 1 Score: 234 bits (597), Expect = 3.270e-69
Identity = 123/223 (55.16%), Postives = 152/223 (68.16%), Query Frame = 1
Query:  325 KAEELEADLLSAIEGVQGRGRE-VTQDQRELVDKAVEALENDGGLPKAASSPVVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSEVPPT-VTNVVDFGPRVGQLRVTALASTPFRPMEGFVPRKGDGRFFGLNILGVSQTTPPEDPSRRIDFQFDEAGFDFKALPFNIPYPVPFRLFGDEVKGWIDVTYLSK--RLRIARGNKGTLFVLQRPPSP 981
            K E  +  LL  I GV+GRG+  +T +Q+   D+AV  LE DGG+    +SP++DG W L+FT+ PGTASP+QR+F  VD  ++YQDI++  E     V+ VVDFG  VG LRV A A+T  RP+ GF PR G G  FG  I+G S T PP  P  R+ FQFD A F  KALPF IPYPVPF+L GDE KGWIDVTYLS   RLR++RGNKGTLFVLQ+  +P
Sbjct:   71 KLERAQQTLLGVIAGVEGRGKGGLTPEQQAAFDEAVAILEADGGVEAPTTSPLLDGRWALLFTSRPGTASPIQRTFTAVDSVSVYQDIEVGDECEQARVSQVVDFGSAVGFLRVEAEANTDSRPLPGFTPRVGQGLPFG--IMGKSSTGPPARPDMRVGFQFDRAAFTLKALPFKIPYPVPFKLLGDERKGWIDVTYLSPDGRLRLSRGNKGTLFVLQKEVAP 291          
BLAST of mRNA_Ecto-sp13_S_contig1911.6089.1 vs. uniprot
Match: A0A2P6TS10_CHLSO (Putative plastid-lipid-associated chloroplastic n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TS10_CHLSO)

HSP 1 Score: 246 bits (627), Expect = 6.440e-69
Identity = 127/218 (58.26%), Postives = 150/218 (68.81%), Query Frame = 1
Query:  325 KAEELEADLLSAIEGVQGRGRE-VTQDQRELVDKAVEALENDGGLPKAASSPVVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSEVPPTVTNVVDFGPRVGQLRVTALASTPFRPMEGFVPRKGDGRFFGLNILGVSQTTPPEDPSRRIDFQFDEAGFDFKALPFNIPYPVPFRLFGDEVKGWIDVTYLSK--RLRIARGNKGTLFVLQR 969
            K E  +  +L AI  VQGRG+  +T +Q+   D AV  LE DGG+     SP++DG WRL+FTT PGT+SP+QR+F  VD F IYQDIDL  E  P V  VVDFG  VG LRV A AST  RP+ GF PR+G+G  FG  I+G S + PP  P  R+DFQFD A F F ALPF +PYPVPFRL GDE KGWIDVTYLS   +LR+ RGNKGTLFVL +
Sbjct:  845 KVERAQQAVLDAIADVQGRGKGGMTPEQQAAFDAAVAVLEADGGMAAPTDSPLLDGRWRLLFTTRPGTSSPIQRTFTAVDSFKIYQDIDLAGE-QPRVCQVVDFGKNVGYLRVEAEASTDSRPLAGFTPRRGEGLPFG--IMGRSSSEPPARPGLRVDFQFDRAAFTFNALPFKVPYPVPFRLLGDEAKGWIDVTYLSPDGKLRLTRGNKGTLFVLAK 1059          
BLAST of mRNA_Ecto-sp13_S_contig1911.6089.1 vs. uniprot
Match: A0A7S1WYS5_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1WYS5_9CHLO)

HSP 1 Score: 231 bits (589), Expect = 3.980e-68
Identity = 113/218 (51.83%), Postives = 152/218 (69.72%), Query Frame = 1
Query:  319 TSKAEELEADLLSAIEGVQGRGRE-VTQDQRELVDKAVEALENDGGLPKAASSPVVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSEVPPTVTNVVDFGPRVGQLRVTALASTPFRPMEGFVPRKGDGRFFGLNILGVSQTTPPEDPSRRIDFQFDEAGFDFKALPFNIPYPVPFRLFGDEVKGWIDVTYLSK--RLRIARGNKGTLFVL 963
            TSK +  EA++L  ++  +GRG++ ++ +Q+E +  A+  LE DGGL    +SP++DG W+L++T+ PG++SP+QR+F  VD F ++Q++ L       + N VDFG +VG LRV A A+T  RP+ GFVPR+G G    L  LG S T PP  P++RIDFQFD A F+F  LPF IPYPVPFRL GDE KGWIDVTY+SK    RI+RGNKGT FVL
Sbjct:   60 TSKVKRAEAEVLDILQSARGRGKDGLSSEQQEALAAAIYVLEEDGGLKAPTASPLIDGQWKLLYTSRPGSSSPIQRTFTAVDAFTVFQEVYLRQSDKARINNCVDFGEQVGILRVEAEANTDTRPIPGFVPRRGAG----LPFLGKSSTYPPSRPNQRIDFQFDRAAFNFYRLPFQIPYPVPFRLVGDEGKGWIDVTYMSKDGEFRISRGNKGTTFVL 273          
BLAST of mRNA_Ecto-sp13_S_contig1911.6089.1 vs. uniprot
Match: A0A0D2MM87_9CHLO (Putative plastid-lipid-associated protein 12 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MM87_9CHLO)

HSP 1 Score: 228 bits (582), Expect = 2.930e-67
Identity = 118/235 (50.21%), Postives = 157/235 (66.81%), Query Frame = 1
Query:  301 GSSITKTSKAEELEADLLSAIEGVQGRGRE-VTQDQRELVDKAVEALENDGGLPKAASSPVVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSEVPPTVTNVVDFGPRVGQLRVTALASTPFRPMEGFVPRKGDGRFFGLNILGVSQTTPPEDPSRRIDFQFDEAGFDFKALPFNIPYPVPFRLFGDEVK------GWIDVTYLSK--RLRIARGNKGTLFVLQRPPS 978
            G++ TK       E  +L A+   +GRG+E ++++  + +  A+  LE DGG+    +   +DG WRL++T+ PG+ASP+QR+F GV+ F IYQ++DL S++P  V NVVDFG  +G L V A AST  RP+EGF PR G+G  FG  ILG S  TPP  P+ RIDFQFD+A F FK LPF+IPYPVPFR+ GDE K      GWID TY+++    R+ARGNKGTLFVL + P 
Sbjct:   12 GTTRTKAGSRATTELAVLDALRSAKGRGKEGLSEEALQQLSLAISVLEQDGGVADPTTLDAIDGKWRLLYTSRPGSASPIQRTFTGVEAFKIYQEVDLSSDLP-RVNNVVDFGEEIGYLIVQAKASTESRPLEGFTPRVGEGLPFG--ILGKSFNTPPARPNSRIDFQFDQAAFHFKFLPFSIPYPVPFRILGDERKARPPSPGWIDTTYMNQDGTFRLARGNKGTLFVLVKAPQ 243          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1911.6089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI51_ECTSI5.620e-21793.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z824_9STRA4.520e-8362.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CNY0_9STRA1.040e-7551.41Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6V1SXP2_HETAK1.780e-7558.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9VSS3_9CHLO1.140e-7152.10Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A5J4YBD5_9CHLO5.400e-7153.30Putative plastid-lipid-associated chloroplastic-li... [more]
A0A2P6VFQ7_9CHLO3.270e-6955.16Putative plastid-lipid-associated chloroplastic is... [more]
A0A2P6TS10_CHLSO6.440e-6958.26Putative plastid-lipid-associated chloroplastic n=... [more]
A0A7S1WYS5_9CHLO3.980e-6851.83Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A0D2MM87_9CHLO2.930e-6750.21Putative plastid-lipid-associated protein 12 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1911contigEcto-sp13_S_contig1911:9230..13367 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score612.5
Seed ortholog evalue1.2e-172
Seed eggNOG ortholog2880.D7FI51
Model size1198
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009941,GO:0016020,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
Exons6
EggNOG free text desc.PAP_fibrillin
EggNOG OGs2CN7K@1,2QUCQ@2759
Ec32 ortholog descriptionPlastid lipid-associated protein/fibrillin conserved domain
Ec32 orthologEc-10_003560.1
Cds size993
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1911.6089.1prot_Ecto-sp13_S_contig1911.6089.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1911 9435..13367 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462974.1148684-UTR-Ecto-sp13_S_contig1911:9229..94341681462974.1148684-UTR-Ecto-sp13_S_contig1911:9229..9434Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1911 9230..9434 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462974.128136-CDS-Ecto-sp13_S_contig1911:9434..95451681462974.128136-CDS-Ecto-sp13_S_contig1911:9434..9545Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1911 9435..9545 -
1681462974.1390898-CDS-Ecto-sp13_S_contig1911:10365..104731681462974.1390898-CDS-Ecto-sp13_S_contig1911:10365..10473Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1911 10366..10473 -
1681462974.149552-CDS-Ecto-sp13_S_contig1911:11671..118451681462974.149552-CDS-Ecto-sp13_S_contig1911:11671..11845Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1911 11672..11845 -
1681462974.1597621-CDS-Ecto-sp13_S_contig1911:12073..122871681462974.1597621-CDS-Ecto-sp13_S_contig1911:12073..12287Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1911 12074..12287 -
1681462974.1716566-CDS-Ecto-sp13_S_contig1911:12709..130381681462974.1716566-CDS-Ecto-sp13_S_contig1911:12709..13038Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1911 12710..13038 -
1681462974.1804855-CDS-Ecto-sp13_S_contig1911:13310..133671681462974.1804855-CDS-Ecto-sp13_S_contig1911:13310..13367Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1911 13311..13367 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1911.6089.1

>prot_Ecto-sp13_S_contig1911.6089.1 ID=prot_Ecto-sp13_S_contig1911.6089.1|Name=mRNA_Ecto-sp13_S_contig1911.6089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=331bp
MPAHCTTALVLLGLPLGIQGFVPLLAKNAAGANSGAVTTPTSGTTAATTG
CRRWQHEHRIASGPSSSCAAPPAHALRAAPRPASPASLPEYFMALFGGNK
GSSITKTSKAEELEADLLSAIEGVQGRGREVTQDQRELVDKAVEALENDG
GLPKAASSPVVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLFSE
VPPTVTNVVDFGPRVGQLRVTALASTPFRPMEGFVPRKGDGRFFGLNILG
VSQTTPPEDPSRRIDFQFDEAGFDFKALPFNIPYPVPFRLFGDEVKGWID
VTYLSKRLRIARGNKGTLFVLQRPPSPPPP*
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mRNA from alignment at Ecto-sp13_S_contig1911:9230..13367-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1911.6089.1 ID=mRNA_Ecto-sp13_S_contig1911.6089.1|Name=mRNA_Ecto-sp13_S_contig1911.6089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4138bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1911:9230..13367- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGGCCCACTGCACAACCGCGTTGGTGCTGCTGGGGCTGCCGCTTGG AATACAGGTGACGTTGCTGTTTACGTACGGTTAGCCCGCAGCGCGTGGAG TGCATGTAACATGTTTCGGGACGGCTTACCGCCGTTTCGATGAGTGAGAG TTGACCAGTGCGCAGTCTGGGCTAATCCATGTCCTTTCCCTCAAGGGTTT CTCGTTATCATAAAAAGCTAACCAGGTTTGACCGTTGCATCAGCTCGTCA TCCACCGGAAAAACGCTCTCTGTCTGATTCGTAGTATACCCAACCTCTAC AATACCTAATCTCTTCATCTTTTACGCAGGGATTTGTGCCGTTGCTCGCG AAAAACGCTGCCGGTGCCAACAGCGGCGCGGTGACGACACCCACGTCTGG TACTACTGCTGCCACGACTGGTTGCCGGCGGTGGCAGCATGAGCACAGAA TAGCAAGTGGACCCTCCTCCTCATGCGCGGCACCGCCGGCCCATGCCCTT CGCGCTGCGCCTCGGCCAGCGTCGCCAGCGTCGCTGCCGGAGTACTTCAT GGCCCTCTTCGGTGGAAACAAGGGGAGTTCGATAACGAAAACCAGCAAGG CGGAGGAGCTGGAGGCGGACCTTCTGTCGGCCATCGAAGGGGTTCAGGGT AGGGGGAGGTATGGTTGAGGGCTGTGTGTCAGTTGGTGTTCTTGCGCACC GGTTCTAGACCCACACCGTACCCCACGAAGAGGTGCTGACTATTGACTAT GTAGTCTGCTACATGACGAAGGATCGCAACAGTCCCCACCACACTTCCTT CCGTGTGGGCTATTCGTGAGCTCTAGCCCTGGTGTGGGTCGGCGGACTTG GGGGTTGCTGTTCGACTGTGTGTAATAGCTAGCAAGAGAGAAGATACGGA GGGGAGAGAGAGAGAATGAGGAATACCCCAAAACTGCGATAAAGGGGGAC CCCGCGCTGTCACCCAAAGCCTTTCACCACATACCCTCCACGAGAAAATC CCACCTAATTCCTATGTTCTTACCTATCTTTTTCCATTTACGAACGTGGA CATGTGTACGCGTACCCCTCTACGCTACAGAGAGGTCACCCAGGACCAAC GTGAGCTAGTGGACAAGGCCGTAGAGGCCCTGGAGAACGACGGGGGCCTT CCGAAGGCGGCCTCGAGCCCAGTCGTTGACGGAAGCTGGAGACTGATCTT CACGACCACCCCAGGAACCGCTTCGCCAGTGCAGCGGTCGTTTGTTGGGG TGGATGGCTTCGCCATATACCAGGACATCGACCTCTTCTCGGAGGTGCGA GCGGTCGATTTTGGCTTTCCTTGTTGTCGCTGCTGCTGCTGTGGCCGGGC CGGGTTGGGTGTCCAGGTGTCTTCACACAGCAGACCCGCGGAGAAATATG TCGGTCTTACGATCCCGCTGCGAATGAGAAACTTTTCCGCGTGGACCGCT CGGCAGTACACTAGCTTCTGTCGACCATTGTAAAGCGGGCCCCCACCCCC AACGTGTTTCGGCCCGCTACAGGTGCCCCCGACGGTAACCAACGTGGTGG ACTTCGGGCCCCGAGTAGGGCAGCTGAGAGTTACTGCTCTCGCCAGCACG CCTTTCAGGCCTATGGAAGGCTTCGTCCCGAGGAAGGGCGACGGTCGTTT TTTTGGCCTAAATATATTGGGGGTTAGCCAAACCACCCCGCCGGAGGTGA GAGATAACAACGTGGTTACTGTGCGATTTTCATTTTGGCCATTGAGAACC CCGTAATTGTTATTTTCGTTTGGAGACCGCCCCGAAGGTGCCCAAGGACA GTGCAAGACCTGTGCATTTTTCCTGATTTGATTGAATGTTGCACATTGTG TATTCTTCGTTGTTGCAAATGGAGTGCTTGCGGTGCATGTATAACCAGAA CTGTCATCCGCACACCCTGGTGGTGTAGATTTACCGGTCCATGTCTCTCA TGCGTGCCGCGTACGCGTGTAGTACGCTCTTGTGCTTTGGTTGCATCTTT CCCCACGGCACGTACTGTGCTGCGGAGAGGATCAGTTTGGCAAGCCCTGT GAGCTACGCTTCCCAGCGTGGCCTGAGTGTCGGGGAATTCTCCTCTATAT GACAATTGGGTATAGCAGCAACTAGACCTGTGCAGAGAGCTAGGCTTTGC AGGCAGCAGTAGGTTGACTGCCACACCCAGTATTCAAGGTAGCAGTGAGT TCTAGCTAGTCATTGCTACAGTAAGCTAGTGGTAGTAGGAGCAATCTACA AGGGCATGGATGCATGGATGTCCGGATGCACACACACGGGACTGCCAGGA GACTGTCAGGTGTAGACCAGACCGTTGATACTTTTTTTTTTCGTGCCTTG GAGACCCCAAAAGTTCAGCCGAGACGGAGATCTTGGGGTCATGTGGAATT GTTTTTATTGTTGTGCTCTTGTTGTTTTTTTATGAGCACAATGCGCACTT GCCCCTTGTGCACACTCCTCAAACAACATCATCCGCGCAAATCTGACCCT GGAGTCAGTCAGGAATAACAAGATCTTTCACATCTCTTCGTTCCGAGACA CACCGAGCTGCTGCTGCACTCCAGTGTATACCTCTGCTGGTAGGCTACAC AACAGCTTACGGTTATAGCTTTGCAGCTACTACCTGTCTGCAAACGGATA TCCTCGAGACTGAGCGCGTGTGACCCGCGGCTCGCCGTGCTTCTAACCTT ACGCCTACGATAGACTTTGCGATACCAGCTGCGGCAGCCACAGCAGCAGC AGCAGCAGCAGCAGCAGTGCCCACTATCCAGTGATGTGTGTTCGCCGGCG ATGCGCGTCTTCTTGCCTTTCTTGGTTCCCCTTGATGAACGATGCTTCTT GCACGGTGCACTCATCCATTCCCCCTCCTTGTGATGATTCACAGGACCCC AGCAGGCGCATCGACTTCCAGTTCGATGAAGCCGGCTTCGACTTCAAGGC GCTGCCCTTCAACATCCCCTACCCGGTGCCCTTTCGCTTGTTCGGGGACG AGGTGTGTTGGGTTTTGCTTTTGTTTTTGCTTTCCTGCCATTGCCACGTG TTTTGCTTGGTTTATTCCAGCGAGCAAGTAATACCAACGCGACCGGTAAG CTCAGCGAACTCCGTTCGCTCTGTTGTTGTCGATGACGCTGAAGTAGTCA GCCGGTACTCGCAGCAAGCGGCGCACACGCGCGCCGCCACGTAGGTGCGG AAAGAATGCGCTTTTCCTCGACATTTTTTTTCTTGTTCTTCGTCGTGTGA TTGAAATGACCAGCCTCGCTGTGATTTTCGTGCGCATGATTCTGCGGTAT TTGTATGCGTACGCGTGCGAGCGTGTGTTTTTTTTACTAGCATCGACCGC GCTAGCCGGCTGACCAATGAACAAACGTCAGTCTCAGTGCGGGTGAAAAC CAAGAACACTTCTAAATGCCATTAAGTGGGACCCCGTGAGGGGACGGCAT TGGGGACTAGCCTATTCTCCGGATCAAAGACAGAAACGGTAGCATCAGAA GAAAACGGCACACGTCTCCGCAGGCTGCTACCTTGCACTCGAGTTCGTTT TGGAGTGCTGTATCTTCATAGCGTGGGTGCTGCTTCGAAGTTTTTGAAGG CGTAGAGCGACAGACGTACTCGCTTTGCGTGTTTTTGCCACGAGCTTCTT TCTTTTTAAGGTCGTCGCCACTCTATCCGGCTGATCAATGAAGTCGCCTT AACGGCAGCGTTGGCCGCTCCACGGGTGTGCGTGTTTGTGGGATGCGCGT GTGCCTCGCTACTTTCATGAAGCCTTTGTGTGTTTTACGCTCAATGTTTA CTTATTTGTCTCGCTCGGGCAGGTTAAGGGGTGGATAGACGTCACCTACC TGAGCAAGCGCTTACGGATAGCAAGGGGAAACAAGGGCACCCTCTTCGTG CTCCAGCGGCCACCATCTCCACCACCGCCATAGTTGATGGCAGCACCGCC GTAGTTTAAGCTTTGTGTTGATTTATGTTGAATCGTCATGATTGCTTCCG TCCCCGGCGTTCGGTTGAGTCATCGCACATTCGCGCCCTCGACTCGGTCC CGTGCTCTTTTCGTGCTTGCTCTTATTTGGTTTCGAAGCGGGGCATGCGA GTTTCGCTGCATCTAGGCATCTATCCTAGAAACATCTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1911:9230..13367-

>mRNA_Ecto-sp13_S_contig1911.6089.1 ID=mRNA_Ecto-sp13_S_contig1911.6089.1|Name=mRNA_Ecto-sp13_S_contig1911.6089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=993bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1911:9230..13367- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGGCCCACTGCACAACCGCGTTGGTGCTGCTGGGGCTGCCGCTTGG
AATACAGGGATTTGTGCCGTTGCTCGCGAAAAACGCTGCCGGTGCCAACA
GCGGCGCGGTGACGACACCCACGTCTGGTACTACTGCTGCCACGACTGGT
TGCCGGCGGTGGCAGCATGAGCACAGAATAGCAAGTGGACCCTCCTCCTC
ATGCGCGGCACCGCCGGCCCATGCCCTTCGCGCTGCGCCTCGGCCAGCGT
CGCCAGCGTCGCTGCCGGAGTACTTCATGGCCCTCTTCGGTGGAAACAAG
GGGAGTTCGATAACGAAAACCAGCAAGGCGGAGGAGCTGGAGGCGGACCT
TCTGTCGGCCATCGAAGGGGTTCAGGGTAGGGGGAGAGAGGTCACCCAGG
ACCAACGTGAGCTAGTGGACAAGGCCGTAGAGGCCCTGGAGAACGACGGG
GGCCTTCCGAAGGCGGCCTCGAGCCCAGTCGTTGACGGAAGCTGGAGACT
GATCTTCACGACCACCCCAGGAACCGCTTCGCCAGTGCAGCGGTCGTTTG
TTGGGGTGGATGGCTTCGCCATATACCAGGACATCGACCTCTTCTCGGAG
GTGCCCCCGACGGTAACCAACGTGGTGGACTTCGGGCCCCGAGTAGGGCA
GCTGAGAGTTACTGCTCTCGCCAGCACGCCTTTCAGGCCTATGGAAGGCT
TCGTCCCGAGGAAGGGCGACGGTCGTTTTTTTGGCCTAAATATATTGGGG
GTTAGCCAAACCACCCCGCCGGAGGACCCCAGCAGGCGCATCGACTTCCA
GTTCGATGAAGCCGGCTTCGACTTCAAGGCGCTGCCCTTCAACATCCCCT
ACCCGGTGCCCTTTCGCTTGTTCGGGGACGAGGTTAAGGGGTGGATAGAC
GTCACCTACCTGAGCAAGCGCTTACGGATAGCAAGGGGAAACAAGGGCAC
CCTCTTCGTGCTCCAGCGGCCACCATCTCCACCACCGCCATAG
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