mRNA_Ecto-sp13_S_contig19100.6086.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19100.6086.1
Unique NamemRNA_Ecto-sp13_S_contig19100.6086.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: D7G6P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P9_ECTSI)

HSP 1 Score: 531 bits (1368), Expect = 7.330e-189
Identity = 268/320 (83.75%), Postives = 286/320 (89.38%), Query Frame = 1
Query:    1 MRLGGQSALHALHKAAGFPGATTVYAKIRERSMKFVMCASLEKECLVAAITANLERFARL*DGEKRVVILAIDEIATEPRARYYDRTDEVLGLCVQHTPAKMTKFVDLDNLEDLSSRLNEGHSHIGSEHTVISACALGNTPHHAIPVAAFASCKAPYPDQQQLVFETVRKCTIFSIVEVPGKLCLPYIKMLITRKVEASRWLRFLWSDRFAAAIGPIVLVASDGDGVRRRLLYNFTSCVASELFAEFDLLDAKTSIHGVLQCFDLKHNGKRLRTRDISKKGVKISAGALPLNCDSLPELFRWYDGKPKETYRTLLNPDDR 960
            MRLGGQ+ALHALHKAAGFPGA+TVYAKIRERSMKFV+CASLEK+CLVAAITANLERF+RL DGE+RVVIL IDEIATEPRARYY  TDE+LGLCVQHTP K TKF DLDNLEDLS RLNEGHSHIGSEHTVISACALG+TPHHAIPV AFASCKA  P QQQLVFETVR C I S+VEVPGKLCL  I ++ITRKVEASR +  +W+DRFA  I PIVLVASDGDGVRRRLLYNFTS V SE FAEFDLLDA TS +GV+QCFDLKHN KRLRTRDISK+GVKISA ALPLNCDS P+LFRWYD KP ETYRTLLNPDDR
Sbjct:    1 MRLGGQTALHALHKAAGFPGASTVYAKIRERSMKFVVCASLEKDCLVAAITANLERFSRLYDGERRVVILEIDEIATEPRARYYGLTDEILGLCVQHTPPKSTKF-DLDNLEDLSGRLNEGHSHIGSEHTVISACALGDTPHHAIPVVAFASCKARNPGQQQLVFETVRHCIIVSLVEVPGKLCLQLIWLMITRKVEASRGILEVWNDRFAPTIDPIVLVASDGDGVRRRLLYNFTSSVTSEKFAEFDLLDAMTSEYGVVQCFDLKHNLKRLRTRDISKRGVKISASALPLNCDSFPQLFRWYDCKPNETYRTLLNPDDR 319          
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: D7FQM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM1_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 3.170e-108
Identity = 172/321 (53.58%), Postives = 212/321 (66.04%), Query Frame = 1
Query:    1 MRLGGQSALHALHKAAGFPGATTVYAKIRERSMKFVMCASLEKECLVAAITANLERFARL*DGEKRVVILAIDEIATEPRARYYDRTDEVLGLCVQHTPAKMTKFVDLDNLEDLSSRLNEGHSHIGSEHTVISACALGNTPHHAIPVAAFASCKAPYPDQQQLVFETVRKCTIFSIVEVPGKLCLPYIKMLITRKVEASRWLRFLWSDR--FAAAIGPIVLVASDGDGVRRRLLYNFTSCVASELFAEFDLLDAKTSIHGVLQCFDLKHNGKRLRTRDISKKGVKISAGALPLNCDSLPELFRWYDGKPKETYRTLLNPDD 957
            MRLGGQS LHALHKAAGFPGATTVYAKIRERSMKF +CAS + ECL AAITANLERF  L  GEKRV+IL +DE+ATE RARY    D ++GLCVQ TP K TKF  + ++E+++  L++G  HIG +HTVIS  ALG+ P+HA+P+ AFA C  P P QQQL   T+                                    +W+    F   +GPIVLV SDGD VRR++L++ TS   S++   F L+D  TS+ G++QCFDLKH  KR RT+DISKKGV++S G L LN D+ PELFR +DG P+ TY  L NPDD
Sbjct:    1 MRLGGQSLLHALHKAAGFPGATTVYAKIRERSMKFALCASADVECLTAAITANLERFVSLYKGEKRVIILQMDELATEQRARYDQEGDNIVGLCVQCTPRKNTKFGGVSSVEEIAGMLDKGECHIGHQHTVISGAALGDRPYHAVPLLAFAVCNEPNPLQQQLALRTILD----------------------------------VWNSNPAFGNTLGPIVLVCSDGDAVRRKVLHDLTSGGTSDVLNVFKLMDKTTSVEGLMQCFDLKHCAKRYRTKDISKKGVRVSGG-LALNRDTYPELFRVHDGNPEATYDALFNPDD 286          
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: D7G0J3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J3_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 7.370e-69
Identity = 122/225 (54.22%), Postives = 135/225 (60.00%), Query Frame = 1
Query:  280 CVQHTPAKMTKFVDLDNLEDLSSRLNEGHSHIGSEHTVISACALGNTPHHAIPVAAFASCKAPYPDQQQLVFETVRKCTIFSIVEVPGKLCLPYIKMLITRKVEASRWLRFLWSDRFAAAIGPIVLVASDGDGVRRRLLYNFTSCVASELFAEFDLLDAKTSIHGVLQCFDLKHNGKRLRTRDISKKGVKISAGALPLNCDSLPELFRWYDGKPKETYRTLLNPD 954
            C   TP    +   L  L+   +    G   +G+              HHAIPV A ASCKA  P QQQ+VFET+                                    +W+DRFA  IGPIVLVASDGDGVRRRLLYNFTS V SE FAEFDLLDA TS HGV+QCFDLKHN KRLRTRDISK+GVKI AGALPL CDS P+LF+WYD KP ETYRTLLNPD
Sbjct:   32 CACSTPLPRVRSSTLTTLKTFPAGSTRGTRTVGANTPSSPLALFEKNSHHAIPVVASASCKARNPGQQQVVFETILG----------------------------------VWNDRFAPTIGPIVLVASDGDGVRRRLLYNFTSSVTSEKFAEFDLLDATTSEHGVVQCFDLKHNLKRLRTRDISKRGVKIPAGALPLYCDSFPQLFQWYDCKPNETYRTLLNPD 222          
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: A0A2H3AS53_9AGAR (Uncharacterized protein n=1 Tax=Armillaria solidipes TaxID=1076256 RepID=A0A2H3AS53_9AGAR)

HSP 1 Score: 73.2 bits (178), Expect = 1.400e-10
Identity = 58/177 (32.77%), Postives = 85/177 (48.02%), Query Frame = 1
Query:    4 RLGGQSALHALHKAAGFPGATTVYAKIRERSMKFVMCASLEKECLVAAITANLERFARL*D--------GEKRVVILAIDEIATEPRARYYDRTDEVLGLCVQHTPAKMTKFVDLDNLEDLSSRLNEGHSHIGSEHTVISACAL-GNTP-HHAIPVAAFASCKAPYPDQQQLVFETV 504
            R+GG  A    H+A G PG TT  A+        V   S+ +   V  + +N++    L D           R  +L  DEIATE R RY D+T+  LG+C +H   +  +F  +D+LE +   ++EG  H  SE TV +   L  NT  +HA P+    +CK     +Q  V +TV
Sbjct:  243 RVGGVRAEEIAHRAYGLPGITT--ARDHSTMPAIVPSHSVPR---VGEVESNIDSVLPLGDLFDASEQPPSVRHQVLMFDEIATEKRLRYDDKTNCFLGVCREHGHCRSLEFNSMDDLEQVYKAIDEGQVHYASEATVGALGVLDANTRLYHARPILISGTCKREKGPEQAQVIKTV 414          
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: UPI0004622351 (uncharacterized protein n=1 Tax=Trametes versicolor (strain FP-101664) TaxID=717944 RepID=UPI0004622351)

HSP 1 Score: 69.3 bits (168), Expect = 2.660e-9
Identity = 76/272 (27.94%), Postives = 107/272 (39.34%), Query Frame = 1
Query:  184 DGEKRVVILAIDEIATEPRARYYDRTDEVLGLCVQHTPAKMTKFVDLDNLEDLSSRLNEG--HSHIGSEHTVISACALGNTPHHAIPVAAFASCKAPYPDQQQLVFETVRKCTIFSIVEVPGKLCLPYIKMLITRKVEASRWLR-FL--WSDR--FAAAIGPIVLVASDGDGVRRR----LLYNFTSCVASELFAEFDLLDAKTSIHG---VLQCFDLKHNGKRLRTRDISKKGVKISAGALPLNCDSLPELFRWYDGKPKETYRTLLNPDD 957
            DG      L +D IA E RA Y   T+EV+GLC +H+ A     + LD ++ +++ LN+     H+G E TV +        +HA+P+    SCKA   +                                     E + W+R FL  W +     A  GPI  VA+DGDG  RR    LL   T    S L+ +   L+      G   V    D KH  KR  T   S +G+ +    +  N DSL        G        L++P D
Sbjct:   34 DGSVSGHCLMMDGIAVEQRASYSRVTNEVVGLCREHSGALDLHVISLDAIKHVAAALNDEVPTCHLGKECTVAALAPYRAKNYHAVPILVSPSCKAEKAE-------------------------------------EMAEWIRRFLKWWKESPDGEARHGPIWCVATDGDGTFRRAKFALLMLATLSPESPLYLDLVRLEGLNLWTGEDEVTASADFKHVFKRFATLLRSSEGILVQDTII--NQDSLARHLVKLPGLNAYKVANLIDPSD 266          
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: A0A6A4HXI8_9AGAR (Uncharacterized protein n=1 Tax=Gymnopus androsaceus JB14 TaxID=1447944 RepID=A0A6A4HXI8_9AGAR)

HSP 1 Score: 67.8 bits (164), Expect = 8.550e-9
Identity = 69/267 (25.84%), Postives = 105/267 (39.33%), Query Frame = 1
Query:  190 EKRVVILAIDEIATEPRARYYDRTDEVLGLCVQHTPAKMTKFVDLDNLEDLSSRLNEGHS--HIGSEHTVISACALGNTPHHAIPVAAFASCKAPYPDQQQLVFETVRKCTIFSIVEVPGKLCLPYIKMLITRKVEASRWLRFLWSDRFAAAIGPIVLVASDGDGVRRRLLYNFTSCVASELFAEFDLLDAKTSIHGV-LQC--------FDLKHNGKRLRTRDISKKGVKISAGALPLNCDSLPELFRWYDGKPKETYRTLLNPDD 957
            E+   +L +D IAT  R R   +TDE++GLC +HT          D++  +   ++  H   H G E TV       +T ++  P     +CKA          E      IF  + + G         ++  K+    W                 ++++DGD V R  L     C+  EL     L +    + G+ L C         D KHN KR  T   S +G+ I  G   +N + L  L     G+ KE+   LL+PDD
Sbjct:   92 ERAGQVLMMDGIATTARIRRLRKTDEMVGLCREHTGGLNLSMDSFDSILKVRDAVHGDHPTCHYGKETTVAVFAPFQSTNYYPRPALLSPTCKA----------ERAPDFAIFVALLIQGY-------GIVAEKIYGDLW-----------------VISTDGDAVFR--LGCNQLCLVQELPQNHPLYELLCGMPGLNLTCGENFITYSSDFKHNNKRCATLCRSNQGIMI--GNHIINAEMLSRLLLLLPGQTKESVEGLLDPDD 320          
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: A0A8H7DDW6_9AGAR (Uncharacterized protein n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H7DDW6_9AGAR)

HSP 1 Score: 65.9 bits (159), Expect = 3.920e-8
Identity = 51/158 (32.28%), Postives = 75/158 (47.47%), Query Frame = 1
Query:    1 MRLGGQSALHALHKAAGFPGATTVYAKIRERSMKFVMCASLEKECLVAAITANLERFARL*DGEKRVV--ILAIDEIATEPRARYYDRTDEVLGLCVQHTPAKMTKFVDLDNLEDLSSRLNEGHSHIGSEHTVISACALGNTP--HHAIPVAAFASCK 462
            +R+ G       H+A G P  TT+      R +       L KE +   I A L+ +    DG  R+V   L IDE+ATE R RY DRT++V+G+C  H      +     +L  L + L +G +H+  E TV +   L   P  ++A P+   A CK
Sbjct:  473 LRVAGARVAEIGHRALGLPSVTTLRRNTVIRPLLPSAGRPLVKE-IEYNIDACLDAYPDEDDGRPRIVHQTLIIDEMATERRGRYDDRTNKVVGVCRAHEHKVPLEVETEHDLNTLCAELKKGSAHLAGEATVAALGTLSANPRQYNARPILFSADCK 629          
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: A0A8H7CQY9_9AGAR (Uncharacterized protein n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H7CQY9_9AGAR)

HSP 1 Score: 65.9 bits (159), Expect = 3.930e-8
Identity = 51/158 (32.28%), Postives = 75/158 (47.47%), Query Frame = 1
Query:    1 MRLGGQSALHALHKAAGFPGATTVYAKIRERSMKFVMCASLEKECLVAAITANLERFARL*DGEKRVV--ILAIDEIATEPRARYYDRTDEVLGLCVQHTPAKMTKFVDLDNLEDLSSRLNEGHSHIGSEHTVISACALGNTP--HHAIPVAAFASCK 462
            +R+ G       H+A G P  TT+      R +       L KE +   I A L+ +    DG  R+V   L IDE+ATE R RY DRT++V+G+C  H      +     +L  L + L +G +H+  E TV +   L   P  ++A P+   A CK
Sbjct:  464 LRVAGARVAEIGHRALGLPSVTTLRRNTVIRPLLPSAGRPLVKE-IEYNIDACLDAYPDEDDGRPRIVHQTLVIDEMATERRGRYDDRTNKVVGICRAHEHRVPLEVETEHDLNTLCAELKKGSAHLAGEATVAALGTLSANPRQYNARPILFPADCK 620          
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: A0A4Y9XVU7_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9XVU7_9AGAM)

HSP 1 Score: 65.1 bits (157), Expect = 6.040e-8
Identity = 84/339 (24.78%), Postives = 133/339 (39.23%), Query Frame = 1
Query:    1 MRLGGQSALHALHKAAGFPGATTVYAKIRERSMKFVMCASLEKECL------VAAITANLERFARL*DGEKRVVILAIDEIATEPRARYYDRTDEVLGLCVQHTPAKMTKFVDLDNLEDLSSRLNEGHSHIGSEHTVISACALGNTP--HHAIPVAAFASCKAPYPDQQQLVFETVRKCTIFSIVEVPGKLCLPYIKMLITRKVEASRWLRFLWSDRFAAAIGPIVLVASDGDGVRRRLLYNFT-------SCVASELFAEFDLLDAKTSIHGVLQCFDLKHNG-KRLRTRDISKKGVKISAGALPLNCDSLPELFRWY---DGKPKETYRTLLNPDDR 960
            +RLGG       H+  G P  +T    IR+R+   ++ +S     L      V A   ++        G     +L  DE+ATE R R+ D+T+++LG+C +    +   F  +D+L+ L   L +G  H+ SE TV +   L +    + A PV    SCK    ++   + +T                    I  + +RK + +R                IV VASDG+  R + L   T       S     L  +  L+D       +    D KH   KR+R   +  KGV +S   L       P + R +    G      R++LN  D+
Sbjct:  452 LRLGGARVADIAHRIFGTPATST----IRQRTSIPLLLSSPSTPTLSEIRHNVEATFQDMSGLLTGSPGSAMHAVLMFDELATEKRPRWDDKTNKILGICRECGKGRCLDFSSMDDLQLLFEDLEKGTIHLASEATVGAIGLLSDNTRLYSARPVLLSGSCKRESAEEHAELLQTT-------------------INAINSRK-DLTR--------------ARIVSVASDGEARRGKALVQLTFKSPLSPSSPIYYLLGQLPLMDLWVGDDDLTADKDFKHVAFKRVRNALLRDKGVLVSGIYLT------PSILRSHLSDAGHSAIHIRSILNASDK 746          
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: A0A8H6HR01_9AGAR (Uncharacterized protein n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H6HR01_9AGAR)

HSP 1 Score: 63.9 bits (154), Expect = 1.670e-7
Identity = 85/341 (24.93%), Postives = 129/341 (37.83%), Query Frame = 1
Query:    4 RLGGQSALHALHKAAGFPGATTVY-AKIR---ERSMKFVMCASLEKECL-----VAAITANLERFARL*DGEKRVVILAIDEIATEPRARYYDRTDEVLGLCVQHTPAKMTKFVDLDNLEDLSSRLNEGHSHIGSEHTVISACALG--NTPHHAIPVAAFASCKAPYPDQQQLVFETVRKCTIFSIVEVPGKLCLPYIKMLITRKVEASRWLRFLWSDRFAAAIGPIVLVASDGDGVRRRLLYNFT-------SCVASELFAEFDLLDAKTSIHGVLQCFDLKHNGKRLRTRDISKKGV-----KISAGALPLNCDSLPELFRWYDGKPKETYRTLLNPDD 957
            R+GG    H LH+A G P   ++  A +R   + S      A + K  L     V  I  N        D   R  +L  DE+A E R RY  RT+E++G C++H      KF  + ++E+    +++G  H+ SE T+     L   N  + +  V   A CK     +   V +TV          V G              ++A+  LR             IV +ASDG+  R   L   T       +     L     LLD       +    D KH  KR R   + ++GV     +I+   +    +S          K KE   ++ NP+D
Sbjct:  543 RIGGARVGHILHRALGLPSVGSLRNASVRIPVQPSAGMPTAAEVSKNALNMLEGVIPIIKN--------DPNVRHAVLMFDELAVERRPRYNQRTNELVGACLEHAHEIALKFETMGDVEEFFRAVDDGDVHLASEATIAGVGILSKENRLYSSRIVLISADCKKETGSEHARVLQTV----------VNG-----------LDDIKATTNLR-------------IVSIASDGEARRGSALVELTFKRELSENSNIYPLLHPLRLLDLHVGDDDLTCDKDWKHVFKRFRNLLLREQGVLVDGFRITPSVIKKQLEST---------KSKEHINSVANPND 832          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G6P9_ECTSI7.330e-18983.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQM1_ECTSI3.170e-10853.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0J3_ECTSI7.370e-6954.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2H3AS53_9AGAR1.400e-1032.77Uncharacterized protein n=1 Tax=Armillaria solidip... [more]
UPI00046223512.660e-927.94uncharacterized protein n=1 Tax=Trametes versicolo... [more]
A0A6A4HXI8_9AGAR8.550e-925.84Uncharacterized protein n=1 Tax=Gymnopus androsace... [more]
A0A8H7DDW6_9AGAR3.920e-832.28Uncharacterized protein n=1 Tax=Mycena venus TaxID... [more]
A0A8H7CQY9_9AGAR3.930e-832.28Uncharacterized protein n=1 Tax=Mycena venus TaxID... [more]
A0A4Y9XVU7_9AGAM6.040e-824.78Uncharacterized protein n=1 Tax=Dentipellis fragil... [more]
A0A8H6HR01_9AGAR1.670e-724.93Uncharacterized protein n=1 Tax=Tulosesus angulatu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19100contigEcto-sp13_S_contig19100:1884..3304 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size960
Hectar predicted targeting categoryother localisation
Exons4
Cds size657
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462973.9252746-CDS-Ecto-sp13_S_contig19100:1883..22301681462973.9252746-CDS-Ecto-sp13_S_contig19100:1883..2230Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19100 1884..2230 -
1681462973.9350858-CDS-Ecto-sp13_S_contig19100:2312..26221681462973.9350858-CDS-Ecto-sp13_S_contig19100:2312..2622Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19100 2313..2622 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462973.9448597-UTR-Ecto-sp13_S_contig19100:2622..26581681462973.9448597-UTR-Ecto-sp13_S_contig19100:2622..2658Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig19100 2623..2658 -
1681462973.9548364-UTR-Ecto-sp13_S_contig19100:2852..30231681462973.9548364-UTR-Ecto-sp13_S_contig19100:2852..3023Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig19100 2853..3023 -
1681462973.9651494-UTR-Ecto-sp13_S_contig19100:3208..33041681462973.9651494-UTR-Ecto-sp13_S_contig19100:3208..3304Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig19100 3209..3304 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19100.6086.1prot_Ecto-sp13_S_contig19100.6086.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19100 1884..2622 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19100.6086.1

>prot_Ecto-sp13_S_contig19100.6086.1 ID=prot_Ecto-sp13_S_contig19100.6086.1|Name=mRNA_Ecto-sp13_S_contig19100.6086.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
MTKFVDLDNLEDLSSRLNEGHSHIGSEHTVISACALGNTPHHAIPVAAFA
SCKAPYPDQQQLVFETVRKCTIFSIVEVPGKLCLPYIKMLITRKVEASRW
LRFLWSDRFAAAIGPIVLVASDGDGVRRRLLYNFTSCVASELFAEFDLLD
AKTSIHGVLQCFDLKHNGKRLRTRDISKKGVKISAGALPLNCDSLPELFR
WYDGKPKETYRTLLNPDDR
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mRNA from alignment at Ecto-sp13_S_contig19100:1884..3304-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19100.6086.1 ID=mRNA_Ecto-sp13_S_contig19100.6086.1|Name=mRNA_Ecto-sp13_S_contig19100.6086.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1421bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19100:1884..3304- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGGCTCGGGGGACAATCGGCACTGCATGCGTTGCACAAAGCAGCAGG GTTCCCGGGGGCAACGACGGTGTACGCGAAGATCCGGGAGCGTTCGGTGA GCAACAGGGAGTTGGAACATTAGGATCACCACAAGAACAAGCAGCAGCCA TTTTAGCCGTTTGCACACGTTGATTTGCAGTGCGACAATCTCGGTGTATT GTGGTCGGTTTGTTTTCACTCTCTCTGCTCTTGCTGACGCCGTGATTCTG CAACGTTCTGTGTGCATGTTCGTCATTGCAGATGAAGTTTGTCATGTGCG CTTCGCTTGAGAAGGAGTGCCTGGTTGCGGCAATCACGGCGAACCTGGAG CGCTTTGCGCGGCTGTAAGATGGCGAGAAGAGAGTGGTCATCCTGGCGAT CGACGAGATTGCGACGGAGCCGCGTGCAAGATACTACGATCGTACGGATG AGGTGCGTACTGAGAGCGCTTCGGCTCTTTGTAAGTTCTAAAAGTCGGGA GGCGTGTCTCGCGTAGCCATTACCCACCGTTTGCACTGGAAGTCTGGATG TGTTTCGTGGTGGCCGAGGATGTGCTTCCATCAGCCACATTTTGATTCGT GTCCCACACCACAAACGGTGATATCCCTCAATATCTTTGAAATCAGGTAT TGGGCCTGTGCGTGCAGCACACCCCTGCCAAGATGACCAAGTTCGTCGAC CTTGACAACCTTGAAGACCTTTCCAGCCGGCTCAACGAGGGGCACTCGCA CATTGGCAGCGAACACACCGTCATCTCCGCTTGTGCTCTCGGAAATACTC CTCACCACGCCATACCAGTCGCGGCATTCGCCAGCTGCAAGGCGCCTTAC CCAGACCAGCAGCAACTCGTCTTCGAAACGGTGAGAAAGTGTACCATTTT TTCCATTGTTGAGGTACCCGGGAAACTGTGCCTCCCGTATATAAAAATGC TGATAACGCGGAAGGTCGAGGCATCCCGATGGTTGAGGTTCTGTCCATGC CCCGCTCCCTCTCTACTCCAAATATCTACTAAGCATGTTTTACCGGCCTC GCACGTTGACGCAGATACTGGAAGTGTGGAGCGATCGATTCGCTGCCGCC ATCGGCCCCATCGTGCTCGTGGCTTCGGATGGGGACGGCGTGAGGCGCCG GTTGCTCTACAACTTCACCAGCTGTGTCGCGTCCGAGTTGTTCGCTGAGT TCGACCTCCTCGACGCCAAGACTAGCATACACGGCGTGTTACAGTGCTTC GATCTGAAGCACAACGGGAAGCGGCTTCGCACGAGGGACATTTCGAAGAA AGGGGTGAAGATATCGGCGGGCGCACTTCCGCTTAACTGCGACAGCTTGC CAGAGCTCTTTCGGTGGTACGACGGCAAACCGAAGGAGACGTACAGGACC TTGCTCAACCCGGACGACAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19100:1884..3304-

>mRNA_Ecto-sp13_S_contig19100.6086.1 ID=mRNA_Ecto-sp13_S_contig19100.6086.1|Name=mRNA_Ecto-sp13_S_contig19100.6086.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=657bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19100:1884..3304- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACCAAGTTCGTCGACCTTGACAACCTTGAAGACCTTTCCAGCCGGCT
CAACGAGGGGCACTCGCACATTGGCAGCGAACACACCGTCATCTCCGCTT
GTGCTCTCGGAAATACTCCTCACCACGCCATACCAGTCGCGGCATTCGCC
AGCTGCAAGGCGCCTTACCCAGACCAGCAGCAACTCGTCTTCGAAACGGT
GAGAAAGTGTACCATTTTTTCCATTGTTGAGGTACCCGGGAAACTGTGCC
TCCCGTATATAAAAATGCTGATAACGCGGAAGGTCGAGGCATCCCGATGG
TTGAGGTTCTTGTGGAGCGATCGATTCGCTGCCGCCATCGGCCCCATCGT
GCTCGTGGCTTCGGATGGGGACGGCGTGAGGCGCCGGTTGCTCTACAACT
TCACCAGCTGTGTCGCGTCCGAGTTGTTCGCTGAGTTCGACCTCCTCGAC
GCCAAGACTAGCATACACGGCGTGTTACAGTGCTTCGATCTGAAGCACAA
CGGGAAGCGGCTTCGCACGAGGGACATTTCGAAGAAAGGGGTGAAGATAT
CGGCGGGCGCACTTCCGCTTAACTGCGACAGCTTGCCAGAGCTCTTTCGG
TGGTACGACGGCAAACCGAAGGAGACGTACAGGACCTTGCTCAACCCGGA
CGACAGG
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