prot_Ecto-sp13_S_contig19100.6086.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19100.6086.1
Unique Nameprot_Ecto-sp13_S_contig19100.6086.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length219
Homology
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: D7G6P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P9_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 1.350e-120
Identity = 179/218 (82.11%), Postives = 190/218 (87.16%), Query Frame = 0
Query:    2 TKFVDLDNLEDLSSRLNEGHSHIGSEHTVISACALGNTPHHAIPVAAFASCKAPYPDQQQLVFETVRKCTIFSIVEVPGKLCLPYIKMLITRKVEASRWLRFLWSDRFAAAIGPIVLVASDGDGVRRRLLYNFTSCVASELFAEFDLLDAKTSIHGVLQCFDLKHNGKRLRTRDISKKGVKISAGALPLNCDSLPELFRWYDGKPKETYRTLLNPDDR 219
            TKF DLDNLEDLS RLNEGHSHIGSEHTVISACALG+TPHHAIPV AFASCKA  P QQQLVFETVR C I S+VEVPGKLCL  I ++ITRKVEASR +  +W+DRFA  I PIVLVASDGDGVRRRLLYNFTS V SE FAEFDLLDA TS +GV+QCFDLKHN KRLRTRDISK+GVKISA ALPLNCDS P+LFRWYD KP ETYRTLLNPDDR
Sbjct:  103 TKF-DLDNLEDLSGRLNEGHSHIGSEHTVISACALGDTPHHAIPVVAFASCKARNPGQQQLVFETVRHCIIVSLVEVPGKLCLQLIWLMITRKVEASRGILEVWNDRFAPTIDPIVLVASDGDGVRRRLLYNFTSSVTSEKFAEFDLLDAMTSEYGVVQCFDLKHNLKRLRTRDISKRGVKISASALPLNCDSFPQLFRWYDCKPNETYRTLLNPDDR 319          
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: D7G0J3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J3_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 1.080e-60
Identity = 95/114 (83.33%), Postives = 101/114 (88.60%), Query Frame = 0
Query:  104 LWSDRFAAAIGPIVLVASDGDGVRRRLLYNFTSCVASELFAEFDLLDAKTSIHGVLQCFDLKHNGKRLRTRDISKKGVKISAGALPLNCDSLPELFRWYDGKPKETYRTLLNPD 217
            +W+DRFA  IGPIVLVASDGDGVRRRLLYNFTS V SE FAEFDLLDA TS HGV+QCFDLKHN KRLRTRDISK+GVKI AGALPL CDS P+LF+WYD KP ETYRTLLNPD
Sbjct:  109 VWNDRFAPTIGPIVLVASDGDGVRRRLLYNFTSSVTSEKFAEFDLLDATTSEHGVVQCFDLKHNLKRLRTRDISKRGVKIPAGALPLYCDSFPQLFQWYDCKPNETYRTLLNPD 222          
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Match: D7FQM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM1_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 1.130e-33
Identity = 66/124 (53.23%), Postives = 86/124 (69.35%), Query Frame = 0
Query:   97 ASRWLRFLWSDR--FAAAIGPIVLVASDGDGVRRRLLYNFTSCVASELFAEFDLLDAKTSIHGVLQCFDLKHNGKRLRTRDISKKGVKISAGALPLNCDSLPELFRWYDGKPKETYRTLLNPDD 218
            A R +  +W+    F   +GPIVLV SDGD VRR++L++ TS   S++   F L+D  TS+ G++QCFDLKH  KR RT+DISKKGV++S G L LN D+ PELFR +DG P+ TY  L NPDD
Sbjct:  164 ALRTILDVWNSNPAFGNTLGPIVLVCSDGDAVRRKVLHDLTSGGTSDVLNVFKLMDKTTSVEGLMQCFDLKHCAKRYRTKDISKKGVRVSGG-LALNRDTYPELFRVHDGNPEATYDALFNPDD 286          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19100.6086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6P9_ECTSI1.350e-12082.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0J3_ECTSI1.080e-6083.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQM1_ECTSI1.130e-3353.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19100contigEcto-sp13_S_contig19100:1884..2622 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19100.6086.1mRNA_Ecto-sp13_S_contig19100.6086.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19100 1884..3304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19100.6086.1 ID=prot_Ecto-sp13_S_contig19100.6086.1|Name=mRNA_Ecto-sp13_S_contig19100.6086.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
MTKFVDLDNLEDLSSRLNEGHSHIGSEHTVISACALGNTPHHAIPVAAFA
SCKAPYPDQQQLVFETVRKCTIFSIVEVPGKLCLPYIKMLITRKVEASRW
LRFLWSDRFAAAIGPIVLVASDGDGVRRRLLYNFTSCVASELFAEFDLLD
AKTSIHGVLQCFDLKHNGKRLRTRDISKKGVKISAGALPLNCDSLPELFR
WYDGKPKETYRTLLNPDDR
back to top