mRNA_Ecto-sp13_S_contig19092.6079.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19092.6079.1 vs. uniprot
Match: A0A6H5KG25_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG25_9PHAE) HSP 1 Score: 230 bits (586), Expect = 1.060e-67 Identity = 114/121 (94.21%), Postives = 116/121 (95.87%), Query Frame = 1
Query: 25 QAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVCDTDEAYSFEMSRISKMFDLNLGEVKERCAAIATPFYQKALGSAATKWESVKADQLKRARQTLGMDEGVAREMHKGVY 387
QAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVCDT+EAYSFEMSRISKMFDLNLGEVKERCAAIA PFY+KALGSAA KWESVKADQLKRARQTLGMDE VA EMHK VY
Sbjct: 231 QAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVCDTEEAYSFEMSRISKMFDLNLGEVKERCAAIANPFYRKALGSAAAKWESVKADQLKRARQTLGMDEEVAHEMHKEVY 351
BLAST of mRNA_Ecto-sp13_S_contig19092.6079.1 vs. uniprot
Match: A0A835YSG6_9STRA (IAP100 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG6_9STRA) HSP 1 Score: 125 bits (314), Expect = 7.640e-31 Identity = 62/123 (50.41%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 19 HPQAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVCDTDEAYSFEMSRISKMFDLNLGEVKERCAAIATPFYQKALGSAATKWESVKADQLKRARQTLGMDEGVAREMHKGVY 387
H +A++ +Y + V+ TP ELADE++P RRALDKF+FL DRMFEV DT+EAY +EM RI K+F L+ +V RC AIA PFY KAL +AA + ++++ L+ A +TLG+ + + EMH Y
Sbjct: 169 HYEASTLLYRERVLFTPEEELADEYNPARRALDKFLFLADRMFEVSDTEEAYEYEMGRIRKVFGLDAADVNARCLAIARPFYAKALDAAAARLDTLRPGALELAEKTLGITDVMRDEMHLEAY 291
BLAST of mRNA_Ecto-sp13_S_contig19092.6079.1 vs. uniprot
Match: A0A7S2SEM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SEM4_9STRA) HSP 1 Score: 102 bits (255), Expect = 6.650e-23 Identity = 55/126 (43.65%), Postives = 83/126 (65.87%), Query Frame = 1
Query: 19 HPQAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMF-EVCDTDEAYSFEMSRISKMFDLNLGEVKERCAAIATPFYQKALGSAATKWES--VKADQLKRARQTLGMDEGVAREMHKGVY 387
H +AA Q + TP +L D P+R ++DKF+F +R+F + +T+EA+ +EMSR++K FDL+L +R A +A PFY +AL SA +K ++ V AD L+RAR TLG+D+ VAR+MH +
Sbjct: 249 HTKAAKDFSRQTSLFTPVEDLEDPDHPDRMSIDKFLFFSERIFHQGGETEEAFKYEMSRVAKAFDLSLRTAMDRVAEVAEPFYDRALQSARSKIDTGAVSADMLERARNTLGIDDSVARDMHIATF 374
BLAST of mRNA_Ecto-sp13_S_contig19092.6079.1 vs. uniprot
Match: A0A7S2UAH8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAH8_9STRA) HSP 1 Score: 100 bits (248), Expect = 6.050e-22 Identity = 62/136 (45.59%), Postives = 82/136 (60.29%), Query Frame = 1
Query: 19 HPQAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVC-DTDEAYSFEMSRISKMFDLNL--------------GEVKERCAAIATPFYQKALGSAATKWES--VKADQLKRARQTLGMDEGVAREMH 375
H AA +Y Q + TP ELAD P+R ALDKF+FL +R F +T EA+S+EMSRI+K FD+ + E+ ER A +A PFY++AL S K +S V+ D LKRAR T+G+ E VAR+MH
Sbjct: 236 HATAAKDLYRQTCLFTPEEELADVDHPDRMALDKFLFLSERTFVGNGETPEAFSYEMSRIAKAFDIKITKSNAAAADVGGAMSEIMERVAHVAEPFYRRALVSTRAKLDSGAVQPDVLKRARATVGISEEVARDMH 371
BLAST of mRNA_Ecto-sp13_S_contig19092.6079.1 vs. uniprot
Match: B7GEF3_PHATC (Translocator of the inner chloroplast envelope membrane 110k n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GEF3_PHATC) HSP 1 Score: 97.1 bits (240), Expect = 7.240e-21 Identity = 53/126 (42.06%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 19 HPQAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVC-DTDEAYSFEMSRISKMFDLNLGEVKERCAAIATPFYQKALGSAATKW--ESVKADQLKRARQTLGMDEGVAREMHKGVY 387
H AA+ Y + TP+ +L D P+R+A+DKF+FL +R + +TDEA+SFEM R++K FDL+ EV ER A PFYQ+AL S +K V + L+RAR+TLG+ + A+++H +
Sbjct: 248 HAAAAAEWYRTTCLFTPTEDLEDPSHPDRQAMDKFLFLTERALKQGGETDEAFSFEMKRVAKAFDLSYTEVLERVAETVEPFYQRALKSTRSKLGTNQVSSAMLERARKTLGVSDATAKDLHVACF 373
BLAST of mRNA_Ecto-sp13_S_contig19092.6079.1 vs. uniprot
Match: A0A1Z5J5X5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5X5_FISSO) HSP 1 Score: 92.0 bits (227), Expect = 4.090e-19 Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 19 HPQAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVCDTDEAYSFEMSRISKMFDLNLGEVKERCAAIATPFYQKALGSAATKW--ESVKADQLKRARQTLGMDEGVAREMH 375
H AA+ Y Q + TP+ EL D P+R A+DK +FL +R D+ +A++FEM+R++K L L ER A++ PFY +AL S +K +V +D LKRAR+TLG+ E VA +MH
Sbjct: 229 HATAAAEWYRQTCLFTPTEELEDPKHPDRLAMDKLLFLSERALSE-DSPQAFNFEMTRVAKAVGLTLPVAMERVASVVEPFYHRALQSTRSKLGTNAVSSDMLKRARETLGIKEEVAADMH 348
BLAST of mRNA_Ecto-sp13_S_contig19092.6079.1 vs. uniprot
Match: A0A448YYM0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYM0_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 5.850e-17 Identity = 50/126 (39.68%), Postives = 72/126 (57.14%), Query Frame = 1
Query: 19 HPQAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVC-DTDEAYSFEMSRISKMFDLNLGEVKERCAAIATPFYQKALGSAATKWESVKAD--QLKRARQTLGMDEGVAREMHKGVY 387
H AA Y + TP +L D P+R+A+DKF+FL +R + +TDEA+ FEM+R++K L+L + R A + PFY +AL S K K L+RARQTLG+D+ A +MH +
Sbjct: 227 HAAAADEWYRTTCLFTPEEDLEDPDHPDRQAMDKFLFLTERALKQGNETDEAFRFEMTRVAKSMKLSLMDAMFRVADVQQPFYARALVSTRAKLGEGKVSGAMLERARQTLGIDDDTAHDMHVACF 352
BLAST of mRNA_Ecto-sp13_S_contig19092.6079.1 vs. uniprot
Match: A0A7S4EEP3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEP3_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.760e-16 Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 19 HPQAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVCD-TDEAYSFEMSRISKMFDLNLGEVKERCAAIATPFYQKALGSAATKWESVKADQ--LKRARQTLGMDEGVAREMHKGVY 387
H AA Y + TP +L D P+R+A+DK +FL +R + D TD A+ FEM+R+SK L+L + R A + PFY +AL S K K + L+RARQTLG+D+ A +MH +
Sbjct: 241 HAAAAEEWYRTTCLFTPEEDLDDPDHPDRQAMDKLLFLTERALKQGDETDAAFRFEMARVSKFMKLSLVDGMYRVADVQQPFYARALVSTRAKLGEGKVSEAMLERARQTLGIDDDTAHDMHVACF 366
BLAST of mRNA_Ecto-sp13_S_contig19092.6079.1 vs. uniprot
Match: R1ELU4_EMIHU (Tic110 n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ELU4_EMIHU) HSP 1 Score: 62.4 bits (150), Expect = 9.580e-9 Identity = 30/92 (32.61%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 112 LDKFIFLCDRMFEVCDTDEAYSFEMSRISKMFDLNLGEVKERCAAIATPFYQKALGSAATKWESVKADQLKRARQTLGMDEGVAREMHKGVY 387
L K+IFL +R+F +++E Y +E R ++F L+ + +R A+A PFY L A + A QL R +LG+ E A ++H+ ++
Sbjct: 236 LSKYIFLAERLFAKDESEEGYRYESLRAQRLFGLSPADWSDRAEAVAVPFYAGTLDKAVLQAVPATAAQLGGMRDSLGVSEATAAQLHRDIF 327 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19092.6079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19092.6079.1 >prot_Ecto-sp13_S_contig19092.6079.1 ID=prot_Ecto-sp13_S_contig19092.6079.1|Name=mRNA_Ecto-sp13_S_contig19092.6079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp MFCDCRHPQAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEback to top mRNA from alignment at Ecto-sp13_S_contig19092:1913..2750+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19092.6079.1 ID=mRNA_Ecto-sp13_S_contig19092.6079.1|Name=mRNA_Ecto-sp13_S_contig19092.6079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=838bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19092:1913..2750+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19092:1913..2750+ >mRNA_Ecto-sp13_S_contig19092.6079.1 ID=mRNA_Ecto-sp13_S_contig19092.6079.1|Name=mRNA_Ecto-sp13_S_contig19092.6079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=387bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19092:1913..2750+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |