mRNA_Ecto-sp13_S_contig1909.6078.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig1909.6078.1
Unique Name	mRNA_Ecto-sp13_S_contig1909.6078.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: D7FVP9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP9_ECTSI)

HSP 1 Score: 588 bits (1515), Expect = 3.200e-204
Identity = 382/441 (86.62%), Postives = 388/441 (87.98%), Query Frame = 1

Query:    1 MRVVLFIAILAFNADVDGASAAAGTDRTGPRASSKRRGGDRGSSSAVDRAFTARKIAERRKRQDDAVPPDHGYSTGGVEVPTVVIGAVLGERRDGAEGQQSYGAEGGQWESDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIDSLDDDEFDDLSEEYGGAEAYDSRGRRDSGRYSSDSRRRPAPGRRSQGPKAGALAGDGARSSSNRRGYYDDGFGGXXXXXXXXXXXXXXXXXXX--SMQKTKAKGGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRPSRVTRGGGDRADPSRKKSARRAYEEEXXX-GWGVS 1314
            MR VLFIAILAF ADVDGASAAAGT  TG RASS++RGGDRG S+AVDRA TARKIAERRKR+DDAVPPDHG STGGV+ PTVVIGAVLGERRDG EGQ  YGAEGGQWESDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AIDSLD   FDDL EE+GGA AYDSRGRRDSGRYSSDSRRRPAPGR  QGPKAGALAG                   XXXXXXXXXXX X        SMQKTKA GGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRPSRVTRGGGDRADP RKKSARRAYEEEXXX GWGVS
Sbjct:    1 MRGVLFIAILAFYADVDGASAAAGTGSTGLRASSRQRGGDRGGSTAVDRALTARKIAERRKRRDDAVPPDHGRSTGGVDSPTVVIGAVLGERRDGTEGQP-YGAEGGQWESDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AIDSLDXXXFDDL-EEHGGAGAYDSRGRRDSGRYSSDSRRRPAPGRGPQGPKAGALAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXGAGASSPSSMQKTKATGGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRPSRVTRGGGDRADPGRKKSARRAYEEEXXXXGWGVS 436

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BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A4D9DH60_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DH60_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.410e-35
Identity = 72/152 (47.37%), Postives = 98/152 (64.47%), Query Frame = 1

Query:  757 VMKSVGKATGKSMKAMVHALQP-KSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRR 1209
            + K   K T  S+  +   LQP K V L E+L  WK++Q + +P G V +C AT+E R+DGTV T F+G+E V+DF F+   WPR+C IEFEA+AFQGP+D EP  K YKG   R L++   + LEG IYDV G   W+++ + GKF A +R
Sbjct:  167 LFKGAAKITSSSVGKVAGLLQPNKYVSLREVLGVWKVKQKITEPGGEVERCEATLEIRKDGTVVTFFEGKELVTDFLFKERQWPRSCIIEFEARAFQGPYDREPQPKFYKGYVRRSLMNAGSVRLEGKIYDVQGTFFWRQKRQVGKFRAVKR 318

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BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A836CFX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.680e-20
Identity = 44/70 (62.86%), Postives = 48/70 (68.57%), Query Frame = 1

Query:  877 GKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKG 1086
            G   G V  C AT+E R DG VAT F GR+ +SDF F AHAWPRAC I FEA+AFQGP D EPV   YKG
Sbjct:   13 GHVGGHVVPCVATLELRADGAVATRFQGRDLLSDFEFTAHAWPRACAIAFEARAFQGPRDPEPVLMRYKG 82

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BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A7S2S4V2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S4V2_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.980e-18
Identity = 57/152 (37.50%), Postives = 82/152 (53.95%), Query Frame = 1

Query:  775 KATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVT---GKMMWK----RRVKSGKFTARRR 1209
            K TGK   A  +   PK V   +I+  W+++Q           CAA VE    G V  ++   E  + + F   +WPR+CTI+FEA+AFQGP DE+PV  +Y  SF RK+ D  +I + G IY +T   GK  ++    ++   G FTAR+R
Sbjct:  150 KGTGK---AAYYLASPKHVSRQDIVGVWRLDQTALS-----ASCAANVELTMRGDVLVTYQAEEFRTPYYFSERSWPRSCTIQFEARAFQGPRDEQPVNMLYVASFRRKIADRNVIKMVGKIYQITHSKGKFPFRGSKSQKTLVGTFTARKR 293

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BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A7S1D3U6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3U6_CYCTE)

HSP 1 Score: 87.0 bits (214), Expect = 1.660e-16
Identity = 47/103 (45.63%), Postives = 58/103 (56.31%), Query Frame = 1

Query:  904 CAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRP 1212
            CAA +E    G V   ++ +  VS F FR   WP++C IEFEA+AFQGP DEEPV   YKG F RKL D  ++ + G +Y V        R K G F  RR P
Sbjct:   14 CAANIELTPRGEVLVRYEDKVFVSTFLFRERNWPQSCWIEFEARAFQGPDDEEPVLMRYKGYFRRKLADSSVVKMIGHMYIVPNT-----RKKRGPFAQRRGP 111

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BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A6H5LRL5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRL5_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 5.060e-15
Identity = 44/59 (74.58%), Postives = 47/59 (79.66%), Query Frame = -3

Query: 1522 DTHTIERLAKTFLSHICQSSKE*LAIGDRSCENNAPSSRGGVVNGLTAKACKT*KYAPP 1698
            D   I+RL KTFLSH+ QS KE LAIGDRSC NNAPSSRG VVNGLTAKACKT +  PP
Sbjct:  395 DIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKTQRVRPP 453

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BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A6H5KJX4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJX4_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 6.220e-15
Identity = 40/49 (81.63%), Postives = 42/49 (85.71%), Query Frame = -3

Query: 1540 IERLAKTFLSHICQSSKE*LAIGDRSCENNAPSSRGGVVNGLTAKACKT 1686
            I+RL KTFLSH+ QS KE LA GDRSC NNAPSSRG VVNGLTAKACKT
Sbjct:  122 IDRLGKTFLSHLWQSRKERLAFGDRSCGNNAPSSRGRVVNGLTAKACKT 170

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BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A6H5JD24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD24_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.120e-14
Identity = 44/57 (77.19%), Postives = 47/57 (82.46%), Query Frame = -3

Query: 1528 DTHTIERLAKTFLSHICQSSKE*LAIGDRSCENNAPSSRGGVVNGLTAKACKT*KYA 1698
            D   I+RL KTFLSH+ QS KE LAIGDRSC NNAPSSRG VVNGLTAKACKT +YA
Sbjct:  468 DIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKTLEYA 524

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BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A6H5JMW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW7_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.260e-14
Identity = 42/53 (79.25%), Postives = 44/53 (83.02%), Query Frame = -3

Query: 1522 RLAKTFLSHICQSSKE*LAIGDRSCENNAPSSRGGVVNGLTAKACKT*KYAPP 1680
            RL KTFLSH+ QS KE LAIGDR C NNAPSSRG VVNGLTAKACKT +Y PP
Sbjct:  348 RLGKTFLSHLWQSRKERLAIGDRCCGNNAPSSRGRVVNGLTAKACKTEEYVPP 400

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BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A7S4MEB1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MEB1_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.560e-14
Identity = 59/182 (32.42%), Postives = 80/182 (43.96%), Query Frame = 1

Query:  745 AKGGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGK-PPGRVTKCAATVEF--RRDGTVATSFDG-----------------------------------RETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVT--GKMMWK 1170
            A G  +K  GKA         +   PK V   ++   W+++Q VG  P G    CAA VE   R D  V  S  G                                   RE  + + FR  +WPR+CT+EFEA+AFQGP D+EPV   Y+G F RK+ D  ++ + G IY  +  G+  WK
Sbjct:  226 AAGATLKGTGKAA-------YYLAAPKRVSRNDVCGVWRLDQSVGPMPDGPFASCAANVELTPRGDCVVRYSPSGGSATAEASXXXXXXXXXXXXXXXXXXXEGGDSNNIREFRTPYKFRERSWPRSCTVEFEARAFQGPDDDEPVTMYYRGYFRRKIADRSVVKIVGNIYLASRGGRGFWK 400

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FVP9_ECTSI	3.200e-204	86.62	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A4D9DH60_9STRA	1.410e-35	47.37	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A836CFX6_9STRA	5.680e-20	62.86	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2S4V2_9STRA	3.980e-18	37.50	Hypothetical protein (Fragment) n=1 Tax=Eucampia a...	[more]
A0A7S1D3U6_CYCTE	1.660e-16	45.63	Hypothetical protein n=1 Tax=Cyclophora tenuis Tax...	[more]
A0A6H5LRL5_9PHAE	5.060e-15	74.58	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KJX4_9PHAE	6.220e-15	81.63	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JD24_9PHAE	1.120e-14	77.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMW7_9PHAE	1.260e-14	79.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S4MEB1_9STRA	1.560e-14	32.42	Hypothetical protein (Fragment) n=2 Tax=Odontella ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1909	contig	Ecto-sp13_S_contig1909:8746..12897 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	594.3
Seed ortholog evalue	5e-167
Seed eggNOG ortholog	2880.D7FVP9
Model size	1754
Hectar predicted targeting category	chloroplast
Exons	5
EggNOG OGs	2ETV1@1,2SW46@2759
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-01_005950.1
Cds size	1485
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1909.6078.1	prot_Ecto-sp13_S_contig1909.6078.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig1909 8746..12628 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462973.0477543-CDS-Ecto-sp13_S_contig1909:8745..9042	1681462973.0477543-CDS-Ecto-sp13_S_contig1909:8745..9042	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1909 8746..9042 +
1681462973.0591292-CDS-Ecto-sp13_S_contig1909:9788..10361	1681462973.0591292-CDS-Ecto-sp13_S_contig1909:9788..10361	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1909 9789..10361 +
1681462973.069541-CDS-Ecto-sp13_S_contig1909:10791..10944	1681462973.069541-CDS-Ecto-sp13_S_contig1909:10791..10944	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1909 10792..10944 +
1681462973.0819557-CDS-Ecto-sp13_S_contig1909:11642..11702	1681462973.0819557-CDS-Ecto-sp13_S_contig1909:11642..11702	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1909 11643..11702 +
1681462973.1083646-CDS-Ecto-sp13_S_contig1909:12226..12628	1681462973.1083646-CDS-Ecto-sp13_S_contig1909:12226..12628	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1909 12227..12628 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462973.1207676-UTR-Ecto-sp13_S_contig1909:12628..12897	1681462973.1207676-UTR-Ecto-sp13_S_contig1909:12628..12897	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig1909 12629..12897 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig1909:8746..12897+
coding sequence from alignment at Ecto-sp13_S_contig1909:8746..12897+

protein sequence of mRNA_Ecto-sp13_S_contig1909.6078.1

>prot_Ecto-sp13_S_contig1909.6078.1 ID=prot_Ecto-sp13_S_contig1909.6078.1|Name=mRNA_Ecto-sp13_S_contig1909.6078.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=495bp
MRVVLFIAILAFNADVDGASAAAGTDRTGPRASSKRRGGDRGSSSAVDRA
FTARKIAERRKRQDDAVPPDHGYSTGGVEVPTVVIGAVLGERRDGAEGQQ
SYGAEGGQWESDEEEEENEEEEYDDDDDDNDDDWGDEDDDGGGDGGAIDS
LDDDEFDDLSEEYGGAEAYDSRGRRDSGRYSSDSRRRPAPGRRSQGPKAG
ALAGDGARSSSNRRGYYDDGFGGGSGGGRSRSRTGAGASSPSSMQKTKAK
GGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVT
KCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGP
WDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTA
RRRPSRVTRGGGDRADPSRKKSARRAYEEEEQEGWGVSEGGGAGAGSGRR
SSGSGGGGDGGSGGKRRRSGTRARSSTSGVGGKKSRSRSTRDEF*

mRNA from alignment at Ecto-sp13_S_contig1909:8746..12897+

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig1909.6078.1 ID=mRNA_Ecto-sp13_S_contig1909.6078.1|Name=mRNA_Ecto-sp13_S_contig1909.6078.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4152bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1909:8746..12897+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGTGTGGTTCTATTCATCGCCATTTTGGCGTTCAATGCCGATGTGGA
CGGGGCATCAGCAGCCGCGGGAACCGATAGAACAGGGCCCAGGGCGAGCA
GCAAGCGGCGAGGCGGAGATCGAGGCAGCAGCAGCGCCGTAGATCGGGCC
TTCACGGCAAGGAAGATCGCGGAACGAAGGAAGCGTCAAGACGATGCAGT
GCCCCCCGACCACGGTTACTCGACCGGCGGGGTGGAAGTCCCTACGGTGG
TGATCGGGGCCGTGTTGGGGGAAAGAAGAGATGGTGCTGAAGGACAGGTA
ACAACGAGCTGATGCATGTTGCATGTTGTGCAGCGTCGGGTGATGGGAGC
CTGGCACCAACCGCCACTTACCGAACGCCGTCTCGAGGACACAGCAGCAG
TAGTTGGTGAAGCCTTGCGTGGCAGTTGCATCCGACGTGTGCAAAGCTCG
CGATGCTCTGTTTGGTTGCGTTTTTTTTTAGGTTATTGTCCAAACGTTGA
TCATATGTCACCTACATGTGGTCTACACACATTCACAATGCGACGCGTGT
CGTGCCCACAGAAGGCATCGTGTCTGGAGGAAAATCTCGACGAAGAACCA
GGCTGTGTGTTGTCGGTTGCTGCAGGTGGCGGATAGGAGTAGCATTGTAC
AATTTTCTTCGCTGTCCACGTTGTGCCACTGGCTGAGATTACAACGTCCA
AGGAGATGGAATGCCGTGGCAACTGCCCTTGCAAAGCACGCTCTCTCGTG
CATTCACCTCCGTTCCTATTTTTAGCGCCACCGGAATCCGTGGTGTGGCG
ACATCATCTGTCGTCTGTCGTTCTAGCCGTCAGAAACGTACACTTCAGAA
ACGCACACTCACTTCCCGGCCAAACAAAAAGACAACTGCCTGCGAAAGAA
GCTGGCAGTGTCACCCATGTCGAAAGTAAATACACAGCAGCGTTCGGATC
CGCTCGTCTCGTGCTGAAGCTGCACCGTATTCCTGGGTGGTGCGTGCCGC
CCTCAGTCTCTCCCTCTCCGAACGCGATCTTCTTTCGTAAAAGCAGTCGT
ACGGGGCGGAAGGAGGGCAGTGGGAATCTGACGAAGAAGAAGAGGAGAAC
GAGGAGGAGGAGTACGACGATGACGACGACGACAACGACGACGACTGGGG
AGACGAAGATGATGACGGCGGTGGTGACGGTGGTGCTATTGATAGTCTCG
ACGACGACGAGTTTGACGACCTCTCGGAAGAGTACGGCGGAGCGGAAGCG
TACGACAGCCGCGGACGACGAGACAGCGGACGCTACAGCAGCGACAGCCG
TCGCCGCCCCGCCCCCGGCCGCCGCTCCCAGGGGCCAAAAGCAGGCGCCC
TTGCCGGTGATGGCGCAAGGTCGAGCTCGAACCGCCGCGGGTACTACGAT
GATGGCTTCGGCGGTGGGAGCGGCGGCGGCCGCAGCAGGAGCAGGACGGG
GGCGGGGGCGTCGTCGCCGTCCAGCATGCAGAAGACGAAGGCGAAGGGCG
GCGTGATGAAGAGCGTCGGGAAGGCAACGGGAAAGTCGATGAAGGCCATG
GTGCACGCTCTGCAGCCCAAGTCCGTCGGCCTCGGGGAGATCCTAGACAC
GTGGAAGATCGAGCAGGTGTTTCTGAAGGCGCCGTCTTCATGTAATTTTG
CTTTGGACCGCTCTGCCGCGGGATGCGGAGGCACACCGACCCTTTTTCGC
GGTACAGACAAAAAAATGGTTCCCGAAGCGCGCATGTTTTGTGTGTGTGC
CTTGTTATCAAGATCAGGTCCTTGCAGTGCCCTTTGTGCCGCGGGAGGGC
TAGCGGTTGCCGTAGACTTGCCATCTCCCACCGTATTTGTACGCGTGTTT
CATTTGTTTGAGTACGGACAGATGTACTACGCAACACATGTGTGTGTGTT
TCCGAGGCACAACAGTTGAGCATCGCTCCTACCAATTCGACACGTCGTGC
CTCCGAGCAGCACCGCCTGCCACCCACCCGCCCACCCTCGATATCCCGGC
ACAAAAAGCGCAACACGCCTTCACTCTCCCCCCCAAAAAACAAAAGGTCG
TCGGTAAGCCGCCCGGGCGGGTCACCAAGTGCGCGGCTACGGTCGAGTTT
CGGAGGGACGGCACCGTCGCGACGTCCTTCGACGGACGCGAGACCGTCTC
CGATTTCACCTTCCGGGCGCACGCCTGGCCAAGGGCGTGCACCATCGAGG
TACGTACGTGCATACAGCAGCAACAATGAAGAACGGCAATAAATCACGTG
GAGATGGCGTTGCAGCTGCTCGCGAATGGTAGTGGAAGCGGCTGCAGTGA
GACGGTTGTTCAGGTGTTTCGCTGCCCCGAAAATCGCTCGGCGTTAATCA
TGACTGCGGAAGTCGAGAGCGGGCTTTGTTTTTTTTTTTTGTGTGTTATT
TAGTGTTGGAAGCCCAACAGGCGCGCGCCGCATCTTCACAATTTTTCTTG
CCTCAATTTGTTTCTCCTTGCACAGCGAGCCGTCATTTTAAGCTTTGTGA
GTCCTTTCTGTCTGCAGCATTACCTCCAGACGCGACGACTGACTACGCCA
TCTTAGCCCGCCGTTTTGGCAAGAAGCCCTCACTCAGTTCAACGGGTTTC
ATGATGCCGGACCAGACTACGCTTACACAAAAATGGCGAGCTCTTTGCCA
TTTCGCGAAAGAGCGGTACCAATCAAAGCGCTCGCACTTGCGAAGTTTTC
TCGTGTCTCGACGTTGGGCCTCATTTTTTTGGTCCTACTACAGATGCGTC
TCCCGTTGGATGGCCTTTGCTTTCTGGACCCTTACCCACGTTGCTACGCA
TCCCCTTCTTGCCGTTTGCTTTTTCCGGGGTCGGGTTGTTTGTTGTTCGG
TTGGTTGGTCGGTGACGGCGACGGTTGCTCTACCGATAACGCTGCAGTTC
GAAGCCAAGGCTTTCCAAGGACCGTGGGATGAGGAGCCGGTCTGGAAGGT
GTACAAGGTATGAATGCTTGGAAGAAGCAAGTTTTGTGATACTTTTTTTT
GTTTTCCTGTTGTCTTCAGACCGGAGAACCTGAGCGTTCGTCATTAATGC
AGGAAGGAGCCGAGGAAGAGAGGAGGCATTCCGCATACCTCATTCACGCT
TGCTTTTTATTATTGCAGACGTACGCCGTTCACATCCACGCCGAAATCGG
TGGCAAGCAATGTGCGGGACCGACCGCCATTTGTTTACCGGGATCCTCGA
GCCTTACCATGCCGTACGCGCCATCTCATTTCTTGATGGATTTTTTCTCC
ACGGTGTTGTCTGTGGGACCTCTTTGTTGAGCCTTGCTTGCTCGTGTTGG
TATCGACGCGCCTCAAGAGAGCGCATAACAACGCCTGCGGCAGGTAGCAA
TGGGTCAGTCAGGTGGCGGAGGGCCGCCTTCAAGCCCAACCCTCCCTGTT
CTTCCACCAGCGACACACACAAGTACCGCCGTCGCCTTCCTTGTCGATGC
CTCCGAACCTCTCCCTCTCTCCCTCCCGCAGGGGTCGTTCTCTCGCAAGC
TGTTAGACCCCAAGATCATCATGCTGGAAGGCACTATCTACGACGTGACG
GGAAAGATGATGTGGAAGCGGAGGGTCAAGTCCGGCAAGTTCACCGCCCG
CAGGCGTCCGTCACGGGTTACCCGCGGGGGCGGGGACAGAGCCGACCCTA
GCAGAAAGAAGAGCGCCCGGAGGGCCTACGAAGAAGAGGAGCAGGAGGGA
TGGGGAGTCTCGGAAGGCGGGGGGGCAGGAGCGGGCAGCGGCAGGCGCAG
CAGTGGAAGTGGTGGTGGTGGTGATGGTGGTAGTGGTGGCAAAAGGCGGA
GAAGTGGCACGCGTGCTCGGAGTAGCACCAGCGGCGTAGGCGGAAAAAAG
AGTAGGTCCAGGTCCACCAGAGACGAGTTCTAGGGGTTGGGGCGTCGCTA
GATGTAGCGCGCGCGAGCGGGGGGGGGCGTACTTTTATGTTTTGCATGCC
TTAGCGGTCAGACCATTGACCACGCCTCCTCGAGAGGACGGAGCATTGTT
CTCACAGGACCGATCTCCGATGGCCAATCATTCCTTGCTACTTTGACATA
TGTGGCTCAGAAATGTTTTCGCTAGTCTTTCTATCGTATGGGTATCATTT
TGCGAGTGGGGAGGGAACGGCAAGGGCCCAAAAGTGCAGCAGCAGCATAG
AC

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1909:8746..12897+

>mRNA_Ecto-sp13_S_contig1909.6078.1 ID=mRNA_Ecto-sp13_S_contig1909.6078.1|Name=mRNA_Ecto-sp13_S_contig1909.6078.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1485bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1909:8746..12897+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGTGTGGTTCTATTCATCGCCATTTTGGCGTTCAATGCCGATGTGGA
CGGGGCATCAGCAGCCGCGGGAACCGATAGAACAGGGCCCAGGGCGAGCA
GCAAGCGGCGAGGCGGAGATCGAGGCAGCAGCAGCGCCGTAGATCGGGCC
TTCACGGCAAGGAAGATCGCGGAACGAAGGAAGCGTCAAGACGATGCAGT
GCCCCCCGACCACGGTTACTCGACCGGCGGGGTGGAAGTCCCTACGGTGG
TGATCGGGGCCGTGTTGGGGGAAAGAAGAGATGGTGCTGAAGGACAGCAG
TCGTACGGGGCGGAAGGAGGGCAGTGGGAATCTGACGAAGAAGAAGAGGA
GAACGAGGAGGAGGAGTACGACGATGACGACGACGACAACGACGACGACT
GGGGAGACGAAGATGATGACGGCGGTGGTGACGGTGGTGCTATTGATAGT
CTCGACGACGACGAGTTTGACGACCTCTCGGAAGAGTACGGCGGAGCGGA
AGCGTACGACAGCCGCGGACGACGAGACAGCGGACGCTACAGCAGCGACA
GCCGTCGCCGCCCCGCCCCCGGCCGCCGCTCCCAGGGGCCAAAAGCAGGC
GCCCTTGCCGGTGATGGCGCAAGGTCGAGCTCGAACCGCCGCGGGTACTA
CGATGATGGCTTCGGCGGTGGGAGCGGCGGCGGCCGCAGCAGGAGCAGGA
CGGGGGCGGGGGCGTCGTCGCCGTCCAGCATGCAGAAGACGAAGGCGAAG
GGCGGCGTGATGAAGAGCGTCGGGAAGGCAACGGGAAAGTCGATGAAGGC
CATGGTGCACGCTCTGCAGCCCAAGTCCGTCGGCCTCGGGGAGATCCTAG
ACACGTGGAAGATCGAGCAGGTCGTCGGTAAGCCGCCCGGGCGGGTCACC
AAGTGCGCGGCTACGGTCGAGTTTCGGAGGGACGGCACCGTCGCGACGTC
CTTCGACGGACGCGAGACCGTCTCCGATTTCACCTTCCGGGCGCACGCCT
GGCCAAGGGCGTGCACCATCGAGTTCGAAGCCAAGGCTTTCCAAGGACCG
TGGGATGAGGAGCCGGTCTGGAAGGTGTACAAGGGGTCGTTCTCTCGCAA
GCTGTTAGACCCCAAGATCATCATGCTGGAAGGCACTATCTACGACGTGA
CGGGAAAGATGATGTGGAAGCGGAGGGTCAAGTCCGGCAAGTTCACCGCC
CGCAGGCGTCCGTCACGGGTTACCCGCGGGGGCGGGGACAGAGCCGACCC
TAGCAGAAAGAAGAGCGCCCGGAGGGCCTACGAAGAAGAGGAGCAGGAGG
GATGGGGAGTCTCGGAAGGCGGGGGGGCAGGAGCGGGCAGCGGCAGGCGC
AGCAGTGGAAGTGGTGGTGGTGGTGATGGTGGTAGTGGTGGCAAAAGGCG
GAGAAGTGGCACGCGTGCTCGGAGTAGCACCAGCGGCGTAGGCGGAAAAA
AGAGTAGGTCCAGGTCCACCAGAGACGAGTTCTAG