prot_Ecto-sp13_S_contig1909.6078.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1909.6078.1
Unique Nameprot_Ecto-sp13_S_contig1909.6078.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length495
Homology
BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: D7FVP9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP9_ECTSI)

HSP 1 Score: 588 bits (1515), Expect = 1.220e-205
Identity = 382/441 (86.62%), Postives = 388/441 (87.98%), Query Frame = 0
Query:    1 MRVVLFIAILAFNADVDGASAAAGTDRTGPRASSKRRGGDRGSSSAVDRAFTARKIAERRKRQDDAVPPDHGYSTGGVEVPTVVIGAVLGERRDGAEGQQSYGAEGGQWESDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIDSLDDDEFDDLSEEYGGAEAYDSRGRRDSGRYSSDSRRRPAPGRRSQGPKAGALAGDGARSSSNRRGYYDDGFGGXXXXXXXXXXXXXXXXXXX--SMQKTKAKGGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRPSRVTRGGGDRADPSRKKSARRAYEEEXXX-GWGVS 438
            MR VLFIAILAF ADVDGASAAAGT  TG RASS++RGGDRG S+AVDRA TARKIAERRKR+DDAVPPDHG STGGV+ PTVVIGAVLGERRDG EGQ  YGAEGGQWESDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AIDSLD   FDDL EE+GGA AYDSRGRRDSGRYSSDSRRRPAPGR  QGPKAGALAG                   XXXXXXXXXXX X        SMQKTKA GGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRPSRVTRGGGDRADP RKKSARRAYEEEXXX GWGVS
Sbjct:    1 MRGVLFIAILAFYADVDGASAAAGTGSTGLRASSRQRGGDRGGSTAVDRALTARKIAERRKRRDDAVPPDHGRSTGGVDSPTVVIGAVLGERRDGTEGQP-YGAEGGQWESDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AIDSLDXXXFDDL-EEHGGAGAYDSRGRRDSGRYSSDSRRRPAPGRGPQGPKAGALAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXGAGASSPSSMQKTKATGGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRPSRVTRGGGDRADPGRKKSARRAYEEEXXXXGWGVS 436          
BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A4D9DH60_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DH60_9STRA)

HSP 1 Score: 145 bits (367), Expect = 4.230e-36
Identity = 72/152 (47.37%), Postives = 98/152 (64.47%), Query Frame = 0
Query:  253 VMKSVGKATGKSMKAMVHALQP-KSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRR 403
            + K   K T  S+  +   LQP K V L E+L  WK++Q + +P G V +C AT+E R+DGTV T F+G+E V+DF F+   WPR+C IEFEA+AFQGP+D EP  K YKG   R L++   + LEG IYDV G   W+++ + GKF A +R
Sbjct:  167 LFKGAAKITSSSVGKVAGLLQPNKYVSLREVLGVWKVKQKITEPGGEVERCEATLEIRKDGTVVTFFEGKELVTDFLFKERQWPRSCIIEFEARAFQGPYDREPQPKFYKGYVRRSLMNAGSVRLEGKIYDVQGTFFWRQKRQVGKFRAVKR 318          
BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A836CFX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.150e-20
Identity = 44/70 (62.86%), Postives = 48/70 (68.57%), Query Frame = 0
Query:  293 GKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKG 362
            G   G V  C AT+E R DG VAT F GR+ +SDF F AHAWPRAC I FEA+AFQGP D EPV   YKG
Sbjct:   13 GHVGGHVVPCVATLELRADGAVATRFQGRDLLSDFEFTAHAWPRACAIAFEARAFQGPRDPEPVLMRYKG 82          
BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A7S2S4V2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S4V2_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 2.630e-18
Identity = 57/152 (37.50%), Postives = 82/152 (53.95%), Query Frame = 0
Query:  259 KATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVT---GKMMWK----RRVKSGKFTARRR 403
            K TGK   A  +   PK V   +I+  W+++Q           CAA VE    G V  ++   E  + + F   +WPR+CTI+FEA+AFQGP DE+PV  +Y  SF RK+ D  +I + G IY +T   GK  ++    ++   G FTAR+R
Sbjct:  150 KGTGK---AAYYLASPKHVSRQDIVGVWRLDQTALS-----ASCAANVELTMRGDVLVTYQAEEFRTPYYFSERSWPRSCTIQFEARAFQGPRDEQPVNMLYVASFRRKIADRNVIKMVGKIYQITHSKGKFPFRGSKSQKTLVGTFTARKR 293          
BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A7S1D3U6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3U6_CYCTE)

HSP 1 Score: 87.0 bits (214), Expect = 1.290e-16
Identity = 47/103 (45.63%), Postives = 58/103 (56.31%), Query Frame = 0
Query:  302 CAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTARRRP 404
            CAA +E    G V   ++ +  VS F FR   WP++C IEFEA+AFQGP DEEPV   YKG F RKL D  ++ + G +Y V        R K G F  RR P
Sbjct:   14 CAANIELTPRGEVLVRYEDKVFVSTFLFRERNWPQSCWIEFEARAFQGPDDEEPVLMRYKGYFRRKLADSSVVKMIGHMYIVPNT-----RKKRGPFAQRRGP 111          
BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A7S4MEB1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MEB1_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.090e-14
Identity = 59/182 (32.42%), Postives = 80/182 (43.96%), Query Frame = 0
Query:  249 AKGGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGK-PPGRVTKCAATVEF--RRDGTVATSFDG-----------------------------------RETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVT--GKMMWK 390
            A G  +K  GKA         +   PK V   ++   W+++Q VG  P G    CAA VE   R D  V  S  G                                   RE  + + FR  +WPR+CT+EFEA+AFQGP D+EPV   Y+G F RK+ D  ++ + G IY  +  G+  WK
Sbjct:  226 AAGATLKGTGKAA-------YYLAAPKRVSRNDVCGVWRLDQSVGPMPDGPFASCAANVELTPRGDCVVRYSPSGGSATAEASXXXXXXXXXXXXXXXXXXXEGGDSNNIREFRTPYKFRERSWPRSCTVEFEARAFQGPDDDEPVTMYYRGYFRRKIADRSVVKIVGNIYLASRGGRGFWK 400          
BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Match: A0A7R9ZAC9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZAC9_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 5.130e-12
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 0
Query:  321 RETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMM----WK------RRVKSGKFTARRR 403
            +E  + +TFR  AWPR+C +EFEA+AFQGP D+EPV   Y+G F RK+ D  ++ + G IY    +      W+        V+ G FTARRR
Sbjct:   19 KEFRTPYTFRERAWPRSCYVEFEARAFQGPDDDEPVVMFYRGYFRRKIADRSVVKMVGKIYVAKRQRRRPGGWRGDKGGGHGVEVGTFTARRR 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1909.6078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FVP9_ECTSI1.220e-20586.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9DH60_9STRA4.230e-3647.37Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A836CFX6_9STRA4.150e-2062.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2S4V2_9STRA2.630e-1837.50Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S1D3U6_CYCTE1.290e-1645.63Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4MEB1_9STRA1.090e-1432.42Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A7R9ZAC9_9STRA5.130e-1243.01Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..494
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.722

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1909contigEcto-sp13_S_contig1909:8746..12628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1909.6078.1mRNA_Ecto-sp13_S_contig1909.6078.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1909 8746..12897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1909.6078.1 ID=prot_Ecto-sp13_S_contig1909.6078.1|Name=mRNA_Ecto-sp13_S_contig1909.6078.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=495bp
MRVVLFIAILAFNADVDGASAAAGTDRTGPRASSKRRGGDRGSSSAVDRA
FTARKIAERRKRQDDAVPPDHGYSTGGVEVPTVVIGAVLGERRDGAEGQQ
SYGAEGGQWESDEEEEENEEEEYDDDDDDNDDDWGDEDDDGGGDGGAIDS
LDDDEFDDLSEEYGGAEAYDSRGRRDSGRYSSDSRRRPAPGRRSQGPKAG
ALAGDGARSSSNRRGYYDDGFGGGSGGGRSRSRTGAGASSPSSMQKTKAK
GGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVT
KCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGP
WDEEPVWKVYKGSFSRKLLDPKIIMLEGTIYDVTGKMMWKRRVKSGKFTA
RRRPSRVTRGGGDRADPSRKKSARRAYEEEEQEGWGVSEGGGAGAGSGRR
SSGSGGGGDGGSGGKRRRSGTRARSSTSGVGGKKSRSRSTRDEF*
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