mRNA_Ecto-sp13_S_contig1909.6077.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig1909.6077.1
Unique Name	mRNA_Ecto-sp13_S_contig1909.6077.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1909.6077.1 vs. uniprot
Match: A0A6H5LAT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAT0_9PHAE)

HSP 1 Score: 1189 bits (3077), Expect = 0.000e+0
Identity = 963/1200 (80.25%), Postives = 989/1200 (82.42%), Query Frame = 1

Query:    4 IPHRASCSPRRISDRTPVVARTLAPAGEQANLPDLAEPIPHQPTAPGACPPNKTQGRGSEPAVAHGEADAVDSGQPPSSTPQTSARGPPAAATEASTASPLPSPSASPRAISSQPRKRGRQWPKPAPQPSAVELEAAPETNTPATPERVPPPDKMGRSRNTPLPPAAADQAATSDLRKRXXXXXXXXXXXXXXXXXIPDLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQRATPSNSAPLSPVGTPTPRQVAAAVRAAATVAASPQPQPPASLQTAGDIVRLTASPTRQRRSPRIEGAASLGRPEIAPTSEATTPAAAAARRQQRSEAIPERSLPLRKRNRPSNTTPPSAPALATAGPPRQTAHEE-GDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LATDSTRSTPTEKSRPGVLRGLPPCRPDQQRLAAEPREEVDIPAGGNADGSAEIGSRSGKMRRKAQLSAGQRQXXXXXXXXXPEANPPPANHAQDGAGADIGRHVDGGGSVGDCGEDFGGG--GGSVDGGSCNEMNEGGSHVAREEEGRVASSVQQVDGSAKAGGPRNNKRGAVSSGALRSQSRRKVRELADPPAGNERYRGIPRSACGGGGGTSDVSKNETEGPTTTRDEDLALIWEMHQEREGLLAVRKRLRTEVVTLQDEEDELRLVLGLPPARSELVLPTXXXXXXXXVEPPKAVAPAKKKHRPNRQRXTTPPAQGEPXXXXXXXXXXXXXXAAANGASISPQRPSPSVAIGAXXXXXXXXXXXXSPPRALPS-VTTPXXXXXXXXXXXXXXPCVSPPRTERSPVAAASSRSSSIAAASSPQALASAPGSDDTPMGSPLSLPVPGSPVGSFDLASGENDDIEKLLLGLDSMTGDXXXXXXXXXXXIIAPAGGLGGLRHRGAGPAPLPPLPSSGGAPMGARQQPFARERTAGSEPQLSGRRGSGGLNQPESVAGRGTAVGNGVRGQQQPGRGKQLMSSGRGGVALGGRGRGRGARRAPNYLDLNASFLRRPAGRGVASARGGRLGSGSXXXXXXXGRGPPVVGSXXXGRRNXXXXXXXXXXXXXXXXXXXXXXXSCGGRVGGRGHLVRGATGSPGAPCAGGVRYKEPVGVAQPSVEHTSTGGARVTTVSPGDACLPGGSGRPPGL 3573
            IP +ASCSPRRISDRTPVV RT APAGE+ANLP+LAEP P QPTAP   PPN+TQ RGSE A   GEADAVDSG+P SSTPQTSA G  AAATEASTAS LPS  A PRA SSQPR+RG          SA ELEA PETNT A  ERVPPPD+ GR R TPLPPAAADQAAT DLRKRXXXXXXXXXXXXXXXXX   L R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QQRAT SNSAP SPVG PTPRQVAAAV AA          PPASLQTAG+IVR  ASPTRQRRSPRIE AASLGRPEIAPTSE TTPAAAAARRQQR+EAIPERSLP+RKRNRP+NTTPPSAPALATAG PRQTA+EE GDDXXXXXXXXXXXXXXXXXXXXXXXXX           LATDSTRSTPTEKSRPGVLRGLPPCRPDQQRL AEPREEVDIPAGGNADGSAE GSRS               XXXXXXXXX  ANPPPANHAQDGAGADIGRHVD GGS GDCGE+FG    GGSVDGGSCNEMNEGG HVAREEEGRVASS QQVDGS KAGGP   KR AV SG L+SQSRR  RELADPPAGNER+RGIPRS  GGGGGTSD SK+ETEGPTTTRDEDLAL+ EMHQEREGLLAVR RLR EVVTLQDEEDELRLVLGLPPARSELVL T        VEP  AVAPA+KK RPN Q  TTP      XXXXXXXXXXXXXX              PSVAIGA XXXXXXXXXXX         VTTP XXXXXXXXXXXXX      RTERSPVAAASSRSSSIAAASSPQALAS PG+DDTPMGSPLSL VPGSPVGSFD ASGENDDIEKLLLGLDSMTGD XXXXXXXX   +APAGGLGGLR+RGAGPAPLPP PSSGGAP+GARQQPFAR+RTAGS PQLSGRRGSGGLNQPESVAGRGTAVGNGVRGQQQP RG+QL+SSGRGGVA GG+GRGRGARRAPNYLDLNASFLRRPAGRGVASARGGRLGSGS       GRGPPVV SXXX    XXXXXXXXXXXXXXXXXXXXXX S GGRVGGRGHLVRGATG  G P A  VR KE VGVAQ S E TSTGGARVTTVSPGDA LP GSGR PGL
Sbjct:  198 IPRQASCSPRRISDRTPVVPRTSAPAGEEANLPELAEPTPQQPTAPRIFPPNQTQVRGSELA---GEADAVDSGKPSSSTPQTSAGGQAAAATEASTASYLPSLLALPRATSSQPRQRGXXXXXXXXXXSAAELEAPPETNTQAAAERVPPPDETGRPRKTPLPPAAADQAATPDLRKRXXXXXXXXXXXXXXXXXXXXLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRATSSNSAPPSPVGAPTPRQVAAAVGAAXXXXXXXXXXPPASLQTAGNIVRQAASPTRQRRSPRIEDAASLGRPEIAPTSEGTTPAAAAARRQQRTEAIPERSLPIRKRNRPTNTTPPSAPALATAGAPRQTANEEEGDDXXXXXXXXXXXXXXXXXXXXXXXXXRGSTNTNTTAKLATDSTRSTPTEKSRPGVLRGLPPCRPDQQRLPAEPREEVDIPAGGNADGSAETGSRSXXXXXXXXXXXXX--XXXXXXXXXXXANPPPANHAQDGAGADIGRHVDDGGSAGDCGENFGSXXXGGSVDGGSCNEMNEGGFHVAREEEGRVASSEQQVDGSVKAGGPGKTKRSAVGSGGLQSQSRRMARELADPPAGNERHRGIPRSTRGGGGGTSDGSKDETEGPTTTRDEDLALVREMHQEREGLLAVRTRLRREVVTLQDEEDELRLVLGLPPARSELVLATPPPLPPP-VEPSAAVAPAEKKRRPNPQWRTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVAIGASXXXXXXXXXXXXXXXXXXXXVTTPSXXXXXXXXXXXXXXXXXXXRTERSPVAAASSRSSSIAAASSPQALASTPGNDDTPMGSPLSLLVPGSPVGSFDPASGENDDIEKLLLGLDSMTGDDXXXXXXXX---VAPAGGLGGLRYRGAGPAPLPPXPSSGGAPIGARQQPFARQRTAGSGPQLSGRRGSGGLNQPESVAGRGTAVGNGVRGQQQPRRGEQLLSSGRGGVASGGKGRGRGARRAPNYLDLNASFLRRPAGRGVASARGGRLGSGSRGGRGGGGRGPPVVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHGGRVGGRGHLVRGATGPTGGPHAREVRDKELVGVAQHSEEQTSTGGARVTTVSPGDARLPDGSGRLPGL 1388

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1909.6077.1 vs. uniprot
Match: D7FVQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ0_ECTSI)

HSP 1 Score: 922 bits (2382), Expect = 0.000e+0
Identity = 832/1194 (69.68%), Postives = 852/1194 (71.36%), Query Frame = 1

Query:    1 MIPHRASCSPRRISDRTPVVARTLAPAGEQANLPDLAEPIPHQPTAPGACPPNKTQGRGSEPAVAHGEADAVDSGQPPSSTPQTSARGPPAAATEASTASPLPSPSASPRAISSQPRKRGRQWPKPAPQPSAVELEAAPETNTPATPERVPPPDKMGRSRNTPLPPAAADQAATSDLRKRXXXXXXXXXXXXXXXXXIPDLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQRATPSNSAPLSPVGTPTPRQVAAAVRAAATVAASPQPQPPASLQTAGDIVRLTASPTRQRRSPRIEGAASLGRPEIAPTSEATTPAAAAARRQQRSEAIPERSLPLRKRNRPSNTTPPSAPALATAGPPRQTAHEEGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATDSTRSTPTEKSRPGVLRGLPPCRPDQQRLAAEPREEVDIPAGGNADGSAEIGSRSGKMRRKAQLSAGQRQXXXXXXXXXPEANPPPANHAQDGAGADIGRHVDGGGSVGDCGEDFGG-GGGSVDGGSCNEMNEGGSHVAREEEGRVASSVQQVDGSAKAGGPRNNKRGAVSSGALRSQSRRKVRELADPPAGNERYRGIPRSACGGGGGTSDVSKNETEGPTTTRDEDLALIWEMHQEREGLLAVRKRLRTEVVTLQDEEDELRLVLGLPPARSELVLPTXXXXXXXXVEPPKAVAPAKKKHRPNRQRXTTPPA-QGEPXXXXXXXXXXXXXXAAANGASISPQRPSPSVAIGAXXXXXXXXXXXXSPPRALPSV-TTPXXXXXXXXXXXXXXPCVSPPRTERSPVAAASSRSSSIAAASSPQALASAPGSDDTPMGSPLSLPVPGSPVGSFDLASGENDDIEKLLLGLDSMTGDXXXXXXXXXXXIIAPAGGLGGLRHRGAGPAPLPPLPSSGGAPMGARQQPFARERTAGSEPQLSGRRGSGGLNQPESVAGRGTAVGNGVRGQQQPGRGKQLMSSGRGGVALGGRGRGRGARRAPNYLDLNASFLRRPAGRGVASARGGRLGSGSXXXXXXXGRGPPVVGSXXXGRRNXXXXXXXXXXXXXXXXXXXXXXXSCGGRVGGRGHLVRGATGSPGAPCAGGVRYKEPVGVAQPSVEHTSTGGARVTTVSPGDACLPGGSGRPPGL 3573
            MIP RASCSPRRISDRTPVV RT APAGE+ANLP+LAEPIPHQ TAPG     +TQGRGSEPAVAHGEADAVDSGQP SSTPQTSA GP AAATE                                   S+ ELEA PE NTPATPERVPPPDK GR R TPLPPAAADQAA  DLRK XXXXXXXXXXXXXXXXX   L R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                                                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      R+TP+  + P  + G P   P QQRL AEPREEVDIPAG NADGSAE GS+SGKMRRKAQLSAGQRQ         PEANPPPANHAQDGAGADIGRHVD GGSVGDCGEDFGG GGGSVDGGSCNEMNEGGSHV REEEGRVASS QQVDGS KAGG    KR AVSSGALRSQSRRK RELADPPAGNER+RGIPRS  GGGGGTSD +K+ETEGPTTTRDEDLAL+ EMHQE EGLLAVRKRLR EVVTLQDEEDELRLVLGLPPARSELVLPT  XXXXXX                    X      QGEP              AAANGAS+SPQ PSPSVA+GAXXXXXXXXXXXX           TP  XXXXXXXXXX  P VSP RTERSPVAAASSRSSSIAAASSPQALASAPG+DDTPMGSPLSLPVPGSPVGSFDLA  ENDDIEKLLLGLDSMTGDXXXXXXXXXX   APAGGLGGLRHRG GPA      S GGAP+GARQQP ARERTAGSEPQLSGRRG+GGLNQPESVAGRGTAVGN VRGQQ+PGRGKQL+SSGRGGVA GGRGRGRGARRAPNYLDLNASFLRRPAGRG A  RGGRLGSGSXXXXXXX  GPPVVGSXXX    XXXXXXXXXXXXXXXXXXXXXXX   GRVGGRGHLVRGATGSPGAP AGGVR  EPVGVAQ SVE TSTGGARVTTVSPGDACLPGGSGRPPGL
Sbjct:    1 MIPRRASCSPRRISDRTPVVPRTPAPAGEEANLPELAEPIPHQSTAPGTG--GQTQGRGSEPAVAHGEADAVDSGQPSSSTPQTSAGGPTAAATEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAELEAPPEINTPATPERVPPPDKTGRPRKTPLPPAAADQAANPDLRKXXXXXXXXXXXXXXXXXXXXXLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRATPSNSAPPSPV-GTP--TPRQQRLPAEPREEVDIPAGRNADGSAEPGSKSGKMRRKAQLSAGQRQQQQS-----PEANPPPANHAQDGAGADIGRHVDDGGSVGDCGEDFGGNGGGSVDGGSCNEMNEGGSHVTREEEGRVASSEQQVDGSVKAGGVGKKKRAAVSSGALRSQSRRKARELADPPAGNERHRGIPRSTRGGGGGTSDGNKDETEGPTTTRDEDLALVREMHQESEGLLAVRKRLRREVVTLQDEEDELRLVLGLPPARSELVLPTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGEPSVATGTSSCSSSSPAAANGASVSPQHPSPSVAMGAXXXXXXXXXXXXXXXXXXXXXXATPSSXXXXXXXXXXARPSVSPSRTERSPVAAASSRSSSIAAASSPQALASAPGNDDTPMGSPLSLPVPGSPVGSFDLAPAENDDIEKLLLGLDSMTGDXXXXXXXXXX--XAPAGGLGGLRHRGVGPAXXXXXXSFGGAPIGARQQPLARERTAGSEPQLSGRRGNGGLNQPESVAGRGTAVGNSVRGQQRPGRGKQLLSSGRGGVASGGRGRGRGARRAPNYLDLNASFLRRPAGRGAA--RGGRLGSGSXXXXXXXXXGPPVVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGRVGGRGHLVRGATGSPGAPGAGGVRENEPVGVAQHSVEQTSTGGARVTTVSPGDACLPGGSGRPPGL 1080

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1909.6077.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1909.6077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5LAT0_9PHAE	0.000e+0	80.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FVQ0_ECTSI	0.000e+0	69.68	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1909	contig	Ecto-sp13_S_contig1909:2296..7815 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	3576
Hectar predicted targeting category	other localisation
Exons	4
Ec32 ortholog description	AT hook-like
Ec32 ortholog	Ec-01_005940.1
Cds size	3576

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462972.9704318-CDS-Ecto-sp13_S_contig1909:2295..3834	1681462972.9704318-CDS-Ecto-sp13_S_contig1909:2295..3834	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1909 2296..3834 -
1681462972.9826317-CDS-Ecto-sp13_S_contig1909:4461..4710	1681462972.9826317-CDS-Ecto-sp13_S_contig1909:4461..4710	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1909 4462..4710 -
1681462972.991759-CDS-Ecto-sp13_S_contig1909:5688..6033	1681462972.991759-CDS-Ecto-sp13_S_contig1909:5688..6033	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1909 5689..6033 -
1681462973.011677-CDS-Ecto-sp13_S_contig1909:6372..7815	1681462973.011677-CDS-Ecto-sp13_S_contig1909:6372..7815	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1909 6373..7815 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1909.6077.1	prot_Ecto-sp13_S_contig1909.6077.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig1909 2296..7815 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig1909:2296..7815-
coding sequence from alignment at Ecto-sp13_S_contig1909:2296..7815-

protein sequence of mRNA_Ecto-sp13_S_contig1909.6077.1

>prot_Ecto-sp13_S_contig1909.6077.1 ID=prot_Ecto-sp13_S_contig1909.6077.1|Name=mRNA_Ecto-sp13_S_contig1909.6077.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1192bp
MIPHRASCSPRRISDRTPVVARTLAPAGEQANLPDLAEPIPHQPTAPGAC
PPNKTQGRGSEPAVAHGEADAVDSGQPPSSTPQTSARGPPAAATEASTAS
PLPSPSASPRAISSQPRKRGRQWPKPAPQPSAVELEAAPETNTPATPERV
PPPDKMGRSRNTPLPPAAADQAATSDLRKRGRRRKTPLEPAASDQATIPD
LRRKRGRSRKTPLEPAASDETTTPDLPCKRGRPRKTPLEPAASEESTTPD
LPRKKGRPRKTPLEPAVADKATTPAQQRATPSNSAPLSPVGTPTPRQVAA
AVRAAATVAASPQPQPPASLQTAGDIVRLTASPTRQRRSPRIEGAASLGR
PEIAPTSEATTPAAAAARRQQRSEAIPERSLPLRKRNRPSNTTPPSAPAL
ATAGPPRQTAHEEGDDGSSSSSNSDSSGDSSWTSGASGASTNNTAKLATD
STRSTPTEKSRPGVLRGLPPCRPDQQRLAAEPREEVDIPAGGNADGSAEI
GSRSGKMRRKAQLSAGQRQQQQQQQQQSPEANPPPANHAQDGAGADIGRH
VDGGGSVGDCGEDFGGGGGSVDGGSCNEMNEGGSHVAREEEGRVASSVQQ
VDGSAKAGGPRNNKRGAVSSGALRSQSRRKVRELADPPAGNERYRGIPRS
ACGGGGGTSDVSKNETEGPTTTRDEDLALIWEMHQEREGLLAVRKRLRTE
VVTLQDEEDELRLVLGLPPARSELVLPTPPPPLPSPVEPPKAVAPAKKKH
RPNRQRRTTPPAQGEPSAATGTSSCSSSSPAAANGASISPQRPSPSVAIG
ASSSSATASSAGASPPRALPSVTTPSSSPAAAVSAGVAPPCVSPPRTERS
PVAAASSRSSSIAAASSPQALASAPGSDDTPMGSPLSLPVPGSPVGSFDL
ASGENDDIEKLLLGLDSMTGDDDDDDDDDDDDIIAPAGGLGGLRHRGAGP
APLPPLPSSGGAPMGARQQPFARERTAGSEPQLSGRRGSGGLNQPESVAG
RGTAVGNGVRGQQQPGRGKQLMSSGRGGVALGGRGRGRGARRAPNYLDLN
ASFLRRPAGRGVASARGGRLGSGSRGGRSGGGRGPPVVGSGRGGRRNGPV
GVGGGSAAARPGGGGLGSGASCGGRVGGRGHLVRGATGSPGAPCAGGVRY
KEPVGVAQPSVEHTSTGGARVTTVSPGDACLPGGSGRPPGL*

mRNA from alignment at Ecto-sp13_S_contig1909:2296..7815-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig1909.6077.1 ID=mRNA_Ecto-sp13_S_contig1909.6077.1|Name=mRNA_Ecto-sp13_S_contig1909.6077.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5520bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1909:2296..7815- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATCCCACACCGGGCATCTTGTTCACCTCGTCGAATCTCTGATCGGAC
ACCCGTTGTTGCTCGAACACTGGCGCCGGCCGGCGAACAAGCGAATCTTC
CCGATTTGGCGGAACCGATACCCCATCAACCAACAGCTCCGGGAGCATGC
CCTCCGAATAAAACGCAGGGGCGGGGAAGTGAGCCCGCGGTGGCACACGG
GGAGGCGGACGCCGTGGATTCGGGGCAGCCGCCTTCCTCGACTCCGCAAA
CGTCGGCACGAGGACCACCAGCAGCCGCAACGGAAGCGTCGACCGCATCC
CCCTTACCATCGCCTTCGGCTTCACCTCGGGCGATATCTTCGCAGCCCCG
TAAGCGAGGCCGGCAATGGCCGAAGCCTGCACCGCAGCCGTCGGCAGTGG
AGCTTGAGGCTGCACCAGAGACAAATACACCAGCGACCCCGGAGCGAGTT
CCGCCGCCTGACAAGATGGGCCGCTCTAGGAACACCCCGTTGCCACCCGC
TGCAGCAGACCAAGCTGCAACTTCGGACTTGCGCAAGAGGGGCCGTCGAA
GGAAGACGCCGTTGGAGCCTGCTGCATCAGACCAAGCTACGATTCCGGAC
CTGCGTCGCAAGAGGGGGCGCTCGCGGAAGACACCGTTGGAGCCTGCTGC
ATCAGACGAAACGACGACTCCGGACCTGCCTTGCAAGAGGGGGCGCCCGA
GGAAGACACCGTTGGAACCTGCTGCATCCGAGGAATCTACGACTCCGGAC
CTGCCTCGTAAGAAGGGGCGCCCGAGGAAGACACCGTTGGAACCTGCAGT
AGCAGACAAAGCTACGACTCCAGCCCAGCAACGCGCAACCCCGTCGAATT
CTGCGCCGCTTTCTCCAGTGGGCACGCCAACGCCAAGGCAGGTGGCGGCC
GCTGTGAGGGCAGCAGCAACGGTCGCGGCCTCGCCACAGCCGCAACCTCC
AGCATCATTGCAAACAGCGGGAGACATTGTGCGGCTAACCGCTTCGCCAA
CCCGTCAAAGGAGATCTCCAAGGATTGAGGGGGCTGCGAGTTTGGGTCGG
CCGGAAATAGCACCGACATCTGAGGCAACAACACCAGCGGCCGCAGCAGC
CAGACGACAGCAACGGTCAGAGGCGATTCCGGAGAGATCGTTACCTCTTC
GTAAGCGCAACCGTCCGAGTAACACCACCCCGCCTTCGGCACCTGCACTG
GCAACAGCAGGACCCCCTCGGCAGACTGCCCACGAAGAAGGCGACGATGG
CAGCAGCAGCAGCAGCAACAGTGACAGCAGCGGCGATAGCAGCTGGACAA
GCGGTGCCAGCGGCGCCAGTACCAACAACACCGCCAAGCTTGCAACGGAC
TCCACTCGTTCGACTCCCACGGAGAAATCGAGACCTGGTGTGTTGCGGGG
TCTCCCCCCCTGTAGACCGGACCAGCAACGTCTCGCTGCGGAGGTGAGTT
TTTGCGTACAGCGCTGTGAAACGCTTTTGAGTTTCTCGAAGAGACGTCGC
GGGGTTCACTCTTTCTACGAAACCTGTTCTTTTGGATTGAGTCGATGTTC
CGCGGATGGAGATGGAGCGCTGAGGTATAGAAGGGTTTTGTGTTGCGTGG
GTTGTGATAGATGAGGGAGCGAAACGTTGCATGCTTGTTTTGACCGGCGA
TCATATTGGGAAGCCTCGTGCAGCAGGGTTTGCTTCTTTCGTGGCAAGAG
GGTAATTGTTTCATCGCCGTTTTCGCTGTCTGGTTTTCGGCGTCACATTT
TCAACCACGCCACGTCTGCGCGAATTGCTCAGCCACGAGAGGAGGTGGAC
ATCCCCGCAGGAGGGAACGCCGATGGCAGCGCCGAGATCGGAAGCAGGAG
CGGCAAAATGCGGCGGAAGGCACAACTGTCAGCGGGCCAGCGGCAGCAGC
AGCAGCAGCAGCAGCAGCAGTCCCCGGAAGCAAACCCTCCTCCAGCGAAC
CACGCGCAAGACGGTGCTGGTGCTGACATTGGTAGGCACGTGGATGGTGG
TGGGAGTGTAGGAGACTGCGGCGAAGATTTTGGCGGCGGCGGCGGTAGCG
TTGATGGTGGTAGCTGCAACGAGATGAACGAGGGCGGTTCTCACGTCGCA
CGGGAAGAAGAGGGGCGCGTCGCTTCGGTGAGTAAGCTCTCGGGAGACAT
CGCTGTTTTGAAGGTTCTAGTTTGTGTGGGGTCGTTCCTACGTCCATCGA
TGGAAGTGAGACCGATGGTCGGCCTTCAACGTTCTCGACACGAAAGGGGG
CAACTACGCAACTTGGTTCCTATCCGATGAGAGAACGCCGACCTGACAGC
GATGATTTCTATTGTTTCGTTCAACCATACTGTCGTAGACATGGAGCAAC
AAAGAAAGACAAGGTGCGTAGTCTCTTGGCCTTGGAGTGATAACCTTCGC
TGTTCTCACTGAACACCTGTCCAAATAGGAGCTTCCGTCGGAACTGCTTG
CAGCGAACATTTTTTGGGATAGTTAACCTGCGACCACGGACGATATCCGC
GTCAGTTAGGCCAGAACGGACGTCCAATGGTACTGAGCAAATATCGGAAC
GGGTATTTATACAACAACGACATTGGCCTAACCCGTGTGTCCACTCACCT
TGCCCAATATTGAGTTATAGTAGCTTCCCTGTGGGCAACAGATTCAGCAA
GACTGTTTGGTGGTCATCTTGCGTAACGGACTCACGATTATCTACCAGGT
TTCTTTCCGAATACACTAGGTTGTCGGGGAAGACCCCCTCTTACACACAC
ATAGATAGTCTTATTAATCTTTTTTGCCGACGTGGGCTCCGCCTGCTTCG
GCCATAACTAACACGAAAGCTGTGACCTCGCTCCTTGACTCCAAATTGTC
CGTTCGGGATTGCCATTGCGGGTGTGTGGTGCGATTTTTGCTCCCTTATA
AGGGTGAGAAATACGCAACATGAACCAGGAAGCTGCTCATCGCTTCAGGC
TATCCACTTTGCACATTTCATTCTTTGGTTCCGTACCGTATGACGATTGA
GCCCCCACCACCTACCCCCCCCTGCCCCGATCCATAAGACATATTCTTCC
GCCGCTCTTTGGCTGTCCTTTCGCATCACACCGTACTCTTATGTCATGCT
TGTAGTCCGTGCAGCAGGTAGATGGGTCTGCAAAAGCCGGGGGGCCGAGG
AATAATAAAAGGGGAGCAGTCAGCAGCGGCGCACTGCGGTCCCAATCACG
ACGCAAGGTGCGGGAGCTGGCAGACCCTCCAGCGGGGAATGAGCGATATC
GTGGTATTCCCCGATCAGCCTGTGGCGGCGGAGGCGGAACGAGCGATGTC
AGCAAGAACGAGACTGAAGGGCCGACTACCACCAGAGATGAAGACCTTGC
TCTGGTGAGACTCTTGTCGCAGATAACTGTGTGGTCAAGACGAAGGAAAC
GGGAGATCCTGCTTCGTTGGACCTACCACTGCTGTGAAGACGCAGCAGGC
TTTTGTGTTGCGAGACTCTTGGTAGGATGTTTTTGGGAGTTATTACGTCG
ACGCAGTAGACCCTCGTTGTCCTGGCGAGACCTTGGTTTGGAACAGGGGC
AAGACTGAGGCTAGGGAGAGGTTTGTCGTCGGGCCATCACAGACCTTGTT
TTGGAACAGCGCGAGGTTTATCGTCGGACCATCGCTGTTGTCGTTCAACA
ATATTGTTAGGTTCGCCCGTTGCTTGGTTTGCGTGATGCTCGACTGGCAA
CTTTTTTTTCCCGGTGTTCGCTTTGCGTTGCGCCTCGAAACTGTCGTACG
AGGGCGGCAAGCGCGGCAAGCTTTTGGGATATGGTCCCCTCTCAGCTGCT
GAGGGTTTATCGTAAACTACGCCGCCCGCGTTTGCGCTGGTGCGATGGCG
CCTACTGGCGCAATGAAATCCGTATTTGGATCAGCTCTGTGACAAATACG
CAAGCCAAGCGTTGCGGCCATGATTTCGAACCAGCTGTGTTTTTCGTCGT
CACCCTTTGTTCTGCTTGAATCGAATATCAGATCTGGGAAATGCACCAAG
AAAGGGAGGGTCTCTTGGCCGTTCGTAAGAGGTTGCGCACGGAGGTGGTG
ACCTTACAGGACGAAGAGGACGAGCTGAGACTTGTGCTCGGGCTTCCCCC
GGCGCGATCGGAGCTGGTACTTCCCACGCCGCCGCCGCCGCTGCCGTCGC
CAGTGGAGCCACCGAAGGCCGTGGCACCGGCAAAAAAAAAACACAGACCA
AACCGTCAGCGGCGAACCACGCCGCCCGCACAGGGTGAACCCAGTGCCGC
CACCGGCACCTCCTCCTGCTCCTCCTCCTCGCCAGCTGCTGCCAATGGTG
CCAGTATTTCACCACAACGCCCTTCACCCAGTGTCGCCATCGGCGCCTCC
TCCTCCTCAGCCACTGCTAGTAGTGCGGGCGCTTCACCACCACGCGCTTT
ACCCAGTGTCACAACTCCCTCCTCCTCGCCAGCTGCTGCTGTTAGTGCGG
GTGTTGCACCGCCATGCGTTTCACCTCCCCGGACGGAGCGGAGCCCGGTT
GCGGCTGCCAGTTCCAGAAGCAGCAGCATTGCGGCCGCGTCTAGCCCCCA
GGCGCTAGCATCGGCCCCCGGTAGCGACGACACGCCGATGGGGTCGCCGC
TCTCGCTACCCGTGCCGGGTTCCCCGGTCGGCTCTTTTGACCTCGCATCC
GGCGAAAATGACGACATCGAGAAGCTTCTGCTCGGACTTGACTCCATGAC
AGGGGACGACGACGACGACGACGACGACGACGACGACGATATCATTGCAC
CGGCAGGAGGTTTGGGGGGACTCCGCCACCGTGGAGCAGGGCCTGCGCCG
CTGCCGCCGCTGCCGTCGTCCGGCGGGGCGCCTATGGGGGCGAGACAGCA
GCCGTTCGCAAGAGAACGCACTGCTGGCAGTGAGCCGCAGCTATCTGGCC
GCCGAGGGAGTGGTGGATTAAATCAACCAGAGAGCGTAGCAGGGCGTGGG
ACTGCCGTTGGAAACGGTGTCCGTGGACAGCAGCAACCGGGCAGGGGTAA
GCAGCTGATGTCCTCTGGAAGAGGAGGCGTCGCTTTGGGCGGCAGGGGCC
GGGGAAGGGGCGCGAGGCGGGCGCCGAACTACCTAGACTTGAACGCGAGC
TTCCTGCGCCGCCCTGCCGGCAGGGGTGTCGCGTCGGCTCGCGGCGGCAG
GCTCGGCAGCGGAAGCCGCGGTGGTCGTAGCGGCGGCGGACGAGGCCCTC
CGGTGGTGGGCTCAGGGCGAGGAGGGCGGCGCAACGGGCCCGTCGGGGTG
GGGGGAGGAAGTGCAGCAGCAAGACCAGGAGGTGGAGGGTTAGGATCCGG
TGCTTCTTGTGGTGGCCGCGTCGGCGGACGGGGTCATCTGGTACGCGGAG
CGACGGGTTCACCGGGAGCGCCGTGTGCGGGAGGAGTCCGATACAAGGAG
CCCGTGGGCGTAGCACAACCTTCCGTAGAACATACCTCTACCGGTGGAGC
TAGGGTGACCACTGTTTCGCCAGGCGATGCTTGTCTCCCGGGTGGGAGCG
GGCGTCCGCCTGGCCTCTAG

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1909:2296..7815-

>mRNA_Ecto-sp13_S_contig1909.6077.1 ID=mRNA_Ecto-sp13_S_contig1909.6077.1|Name=mRNA_Ecto-sp13_S_contig1909.6077.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3576bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1909:2296..7815- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATCCCACACCGGGCATCTTGTTCACCTCGTCGAATCTCTGATCGGAC
ACCCGTTGTTGCTCGAACACTGGCGCCGGCCGGCGAACAAGCGAATCTTC
CCGATTTGGCGGAACCGATACCCCATCAACCAACAGCTCCGGGAGCATGC
CCTCCGAATAAAACGCAGGGGCGGGGAAGTGAGCCCGCGGTGGCACACGG
GGAGGCGGACGCCGTGGATTCGGGGCAGCCGCCTTCCTCGACTCCGCAAA
CGTCGGCACGAGGACCACCAGCAGCCGCAACGGAAGCGTCGACCGCATCC
CCCTTACCATCGCCTTCGGCTTCACCTCGGGCGATATCTTCGCAGCCCCG
TAAGCGAGGCCGGCAATGGCCGAAGCCTGCACCGCAGCCGTCGGCAGTGG
AGCTTGAGGCTGCACCAGAGACAAATACACCAGCGACCCCGGAGCGAGTT
CCGCCGCCTGACAAGATGGGCCGCTCTAGGAACACCCCGTTGCCACCCGC
TGCAGCAGACCAAGCTGCAACTTCGGACTTGCGCAAGAGGGGCCGTCGAA
GGAAGACGCCGTTGGAGCCTGCTGCATCAGACCAAGCTACGATTCCGGAC
CTGCGTCGCAAGAGGGGGCGCTCGCGGAAGACACCGTTGGAGCCTGCTGC
ATCAGACGAAACGACGACTCCGGACCTGCCTTGCAAGAGGGGGCGCCCGA
GGAAGACACCGTTGGAACCTGCTGCATCCGAGGAATCTACGACTCCGGAC
CTGCCTCGTAAGAAGGGGCGCCCGAGGAAGACACCGTTGGAACCTGCAGT
AGCAGACAAAGCTACGACTCCAGCCCAGCAACGCGCAACCCCGTCGAATT
CTGCGCCGCTTTCTCCAGTGGGCACGCCAACGCCAAGGCAGGTGGCGGCC
GCTGTGAGGGCAGCAGCAACGGTCGCGGCCTCGCCACAGCCGCAACCTCC
AGCATCATTGCAAACAGCGGGAGACATTGTGCGGCTAACCGCTTCGCCAA
CCCGTCAAAGGAGATCTCCAAGGATTGAGGGGGCTGCGAGTTTGGGTCGG
CCGGAAATAGCACCGACATCTGAGGCAACAACACCAGCGGCCGCAGCAGC
CAGACGACAGCAACGGTCAGAGGCGATTCCGGAGAGATCGTTACCTCTTC
GTAAGCGCAACCGTCCGAGTAACACCACCCCGCCTTCGGCACCTGCACTG
GCAACAGCAGGACCCCCTCGGCAGACTGCCCACGAAGAAGGCGACGATGG
CAGCAGCAGCAGCAGCAACAGTGACAGCAGCGGCGATAGCAGCTGGACAA
GCGGTGCCAGCGGCGCCAGTACCAACAACACCGCCAAGCTTGCAACGGAC
TCCACTCGTTCGACTCCCACGGAGAAATCGAGACCTGGTGTGTTGCGGGG
TCTCCCCCCCTGTAGACCGGACCAGCAACGTCTCGCTGCGGAGCCACGAG
AGGAGGTGGACATCCCCGCAGGAGGGAACGCCGATGGCAGCGCCGAGATC
GGAAGCAGGAGCGGCAAAATGCGGCGGAAGGCACAACTGTCAGCGGGCCA
GCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCCCCGGAAGCAAACCCTC
CTCCAGCGAACCACGCGCAAGACGGTGCTGGTGCTGACATTGGTAGGCAC
GTGGATGGTGGTGGGAGTGTAGGAGACTGCGGCGAAGATTTTGGCGGCGG
CGGCGGTAGCGTTGATGGTGGTAGCTGCAACGAGATGAACGAGGGCGGTT
CTCACGTCGCACGGGAAGAAGAGGGGCGCGTCGCTTCGTCCGTGCAGCAG
GTAGATGGGTCTGCAAAAGCCGGGGGGCCGAGGAATAATAAAAGGGGAGC
AGTCAGCAGCGGCGCACTGCGGTCCCAATCACGACGCAAGGTGCGGGAGC
TGGCAGACCCTCCAGCGGGGAATGAGCGATATCGTGGTATTCCCCGATCA
GCCTGTGGCGGCGGAGGCGGAACGAGCGATGTCAGCAAGAACGAGACTGA
AGGGCCGACTACCACCAGAGATGAAGACCTTGCTCTGATCTGGGAAATGC
ACCAAGAAAGGGAGGGTCTCTTGGCCGTTCGTAAGAGGTTGCGCACGGAG
GTGGTGACCTTACAGGACGAAGAGGACGAGCTGAGACTTGTGCTCGGGCT
TCCCCCGGCGCGATCGGAGCTGGTACTTCCCACGCCGCCGCCGCCGCTGC
CGTCGCCAGTGGAGCCACCGAAGGCCGTGGCACCGGCAAAAAAAAAACAC
AGACCAAACCGTCAGCGGCGAACCACGCCGCCCGCACAGGGTGAACCCAG
TGCCGCCACCGGCACCTCCTCCTGCTCCTCCTCCTCGCCAGCTGCTGCCA
ATGGTGCCAGTATTTCACCACAACGCCCTTCACCCAGTGTCGCCATCGGC
GCCTCCTCCTCCTCAGCCACTGCTAGTAGTGCGGGCGCTTCACCACCACG
CGCTTTACCCAGTGTCACAACTCCCTCCTCCTCGCCAGCTGCTGCTGTTA
GTGCGGGTGTTGCACCGCCATGCGTTTCACCTCCCCGGACGGAGCGGAGC
CCGGTTGCGGCTGCCAGTTCCAGAAGCAGCAGCATTGCGGCCGCGTCTAG
CCCCCAGGCGCTAGCATCGGCCCCCGGTAGCGACGACACGCCGATGGGGT
CGCCGCTCTCGCTACCCGTGCCGGGTTCCCCGGTCGGCTCTTTTGACCTC
GCATCCGGCGAAAATGACGACATCGAGAAGCTTCTGCTCGGACTTGACTC
CATGACAGGGGACGACGACGACGACGACGACGACGACGACGACGATATCA
TTGCACCGGCAGGAGGTTTGGGGGGACTCCGCCACCGTGGAGCAGGGCCT
GCGCCGCTGCCGCCGCTGCCGTCGTCCGGCGGGGCGCCTATGGGGGCGAG
ACAGCAGCCGTTCGCAAGAGAACGCACTGCTGGCAGTGAGCCGCAGCTAT
CTGGCCGCCGAGGGAGTGGTGGATTAAATCAACCAGAGAGCGTAGCAGGG
CGTGGGACTGCCGTTGGAAACGGTGTCCGTGGACAGCAGCAACCGGGCAG
GGGTAAGCAGCTGATGTCCTCTGGAAGAGGAGGCGTCGCTTTGGGCGGCA
GGGGCCGGGGAAGGGGCGCGAGGCGGGCGCCGAACTACCTAGACTTGAAC
GCGAGCTTCCTGCGCCGCCCTGCCGGCAGGGGTGTCGCGTCGGCTCGCGG
CGGCAGGCTCGGCAGCGGAAGCCGCGGTGGTCGTAGCGGCGGCGGACGAG
GCCCTCCGGTGGTGGGCTCAGGGCGAGGAGGGCGGCGCAACGGGCCCGTC
GGGGTGGGGGGAGGAAGTGCAGCAGCAAGACCAGGAGGTGGAGGGTTAGG
ATCCGGTGCTTCTTGTGGTGGCCGCGTCGGCGGACGGGGTCATCTGGTAC
GCGGAGCGACGGGTTCACCGGGAGCGCCGTGTGCGGGAGGAGTCCGATAC
AAGGAGCCCGTGGGCGTAGCACAACCTTCCGTAGAACATACCTCTACCGG
TGGAGCTAGGGTGACCACTGTTTCGCCAGGCGATGCTTGTCTCCCGGGTG
GGAGCGGGCGTCCGCCTGGCCTCTAG