prot_Ecto-sp13_S_contig1909.6077.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1909.6077.1
Unique Nameprot_Ecto-sp13_S_contig1909.6077.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1192
Homology
BLAST of mRNA_Ecto-sp13_S_contig1909.6077.1 vs. uniprot
Match: A0A6H5LAT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAT0_9PHAE)

HSP 1 Score: 1189 bits (3077), Expect = 0.000e+0
Identity = 963/1200 (80.25%), Postives = 989/1200 (82.42%), Query Frame = 0
Query:    2 IPHRASCSPRRISDRTPVVARTLAPAGEQANLPDLAEPIPHQPTAPGACPPNKTQGRGSEPAVAHGEADAVDSGQPPSSTPQTSARGPPAAATEASTASPLPSPSASPRAISSQPRKRGRQWPKPAPQPSAVELEAAPETNTPATPERVPPPDKMGRSRNTPLPPAAADQAATSDLRKRXXXXXXXXXXXXXXXXXIPDLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQRATPSNSAPLSPVGTPTPRQVAAAVRAAATVAASPQPQPPASLQTAGDIVRLTASPTRQRRSPRIEGAASLGRPEIAPTSEATTPAAAAARRQQRSEAIPERSLPLRKRNRPSNTTPPSAPALATAGPPRQTAHEE-GDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LATDSTRSTPTEKSRPGVLRGLPPCRPDQQRLAAEPREEVDIPAGGNADGSAEIGSRSGKMRRKAQLSAGQRQXXXXXXXXXPEANPPPANHAQDGAGADIGRHVDGGGSVGDCGEDFGGG--GGSVDGGSCNEMNEGGSHVAREEEGRVASSVQQVDGSAKAGGPRNNKRGAVSSGALRSQSRRKVRELADPPAGNERYRGIPRSACGGGGGTSDVSKNETEGPTTTRDEDLALIWEMHQEREGLLAVRKRLRTEVVTLQDEEDELRLVLGLPPARSELVLPTXXXXXXXXVEPPKAVAPAKKKHRPNRQRXTTPPAQGEPXXXXXXXXXXXXXXAAANGASISPQRPSPSVAIGAXXXXXXXXXXXXSPPRALPS-VTTPXXXXXXXXXXXXXXPCVSPPRTERSPVAAASSRSSSIAAASSPQALASAPGSDDTPMGSPLSLPVPGSPVGSFDLASGENDDIEKLLLGLDSMTGDXXXXXXXXXXXIIAPAGGLGGLRHRGAGPAPLPPLPSSGGAPMGARQQPFARERTAGSEPQLSGRRGSGGLNQPESVAGRGTAVGNGVRGQQQPGRGKQLMSSGRGGVALGGRGRGRGARRAPNYLDLNASFLRRPAGRGVASARGGRLGSGSXXXXXXXGRGPPVVGSXXXGRRNXXXXXXXXXXXXXXXXXXXXXXXSCGGRVGGRGHLVRGATGSPGAPCAGGVRYKEPVGVAQPSVEHTSTGGARVTTVSPGDACLPGGSGRPPGL 1191
            IP +ASCSPRRISDRTPVV RT APAGE+ANLP+LAEP P QPTAP   PPN+TQ RGSE A   GEADAVDSG+P SSTPQTSA G  AAATEASTAS LPS  A PRA SSQPR+RG          SA ELEA PETNT A  ERVPPPD+ GR R TPLPPAAADQAAT DLRKRXXXXXXXXXXXXXXXXX   L R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QQRAT SNSAP SPVG PTPRQVAAAV AA          PPASLQTAG+IVR  ASPTRQRRSPRIE AASLGRPEIAPTSE TTPAAAAARRQQR+EAIPERSLP+RKRNRP+NTTPPSAPALATAG PRQTA+EE GDDXXXXXXXXXXXXXXXXXXXXXXXXX           LATDSTRSTPTEKSRPGVLRGLPPCRPDQQRL AEPREEVDIPAGGNADGSAE GSRS               XXXXXXXXX  ANPPPANHAQDGAGADIGRHVD GGS GDCGE+FG    GGSVDGGSCNEMNEGG HVAREEEGRVASS QQVDGS KAGGP   KR AV SG L+SQSRR  RELADPPAGNER+RGIPRS  GGGGGTSD SK+ETEGPTTTRDEDLAL+ EMHQEREGLLAVR RLR EVVTLQDEEDELRLVLGLPPARSELVL T        VEP  AVAPA+KK RPN Q  TTP      XXXXXXXXXXXXXX              PSVAIGA XXXXXXXXXXX         VTTP XXXXXXXXXXXXX      RTERSPVAAASSRSSSIAAASSPQALAS PG+DDTPMGSPLSL VPGSPVGSFD ASGENDDIEKLLLGLDSMTGD XXXXXXXX   +APAGGLGGLR+RGAGPAPLPP PSSGGAP+GARQQPFAR+RTAGS PQLSGRRGSGGLNQPESVAGRGTAVGNGVRGQQQP RG+QL+SSGRGGVA GG+GRGRGARRAPNYLDLNASFLRRPAGRGVASARGGRLGSGS       GRGPPVV SXXX    XXXXXXXXXXXXXXXXXXXXXX S GGRVGGRGHLVRGATG  G P A  VR KE VGVAQ S E TSTGGARVTTVSPGDA LP GSGR PGL
Sbjct:  198 IPRQASCSPRRISDRTPVVPRTSAPAGEEANLPELAEPTPQQPTAPRIFPPNQTQVRGSELA---GEADAVDSGKPSSSTPQTSAGGQAAAATEASTASYLPSLLALPRATSSQPRQRGXXXXXXXXXXSAAELEAPPETNTQAAAERVPPPDETGRPRKTPLPPAAADQAATPDLRKRXXXXXXXXXXXXXXXXXXXXLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRATSSNSAPPSPVGAPTPRQVAAAVGAAXXXXXXXXXXPPASLQTAGNIVRQAASPTRQRRSPRIEDAASLGRPEIAPTSEGTTPAAAAARRQQRTEAIPERSLPIRKRNRPTNTTPPSAPALATAGAPRQTANEEEGDDXXXXXXXXXXXXXXXXXXXXXXXXXRGSTNTNTTAKLATDSTRSTPTEKSRPGVLRGLPPCRPDQQRLPAEPREEVDIPAGGNADGSAETGSRSXXXXXXXXXXXXX--XXXXXXXXXXXANPPPANHAQDGAGADIGRHVDDGGSAGDCGENFGSXXXGGSVDGGSCNEMNEGGFHVAREEEGRVASSEQQVDGSVKAGGPGKTKRSAVGSGGLQSQSRRMARELADPPAGNERHRGIPRSTRGGGGGTSDGSKDETEGPTTTRDEDLALVREMHQEREGLLAVRTRLRREVVTLQDEEDELRLVLGLPPARSELVLATPPPLPPP-VEPSAAVAPAEKKRRPNPQWRTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVAIGASXXXXXXXXXXXXXXXXXXXXVTTPSXXXXXXXXXXXXXXXXXXXRTERSPVAAASSRSSSIAAASSPQALASTPGNDDTPMGSPLSLLVPGSPVGSFDPASGENDDIEKLLLGLDSMTGDDXXXXXXXX---VAPAGGLGGLRYRGAGPAPLPPXPSSGGAPIGARQQPFARQRTAGSGPQLSGRRGSGGLNQPESVAGRGTAVGNGVRGQQQPRRGEQLLSSGRGGVASGGKGRGRGARRAPNYLDLNASFLRRPAGRGVASARGGRLGSGSRGGRGGGGRGPPVVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHGGRVGGRGHLVRGATGPTGGPHAREVRDKELVGVAQHSEEQTSTGGARVTTVSPGDARLPDGSGRLPGL 1388          
BLAST of mRNA_Ecto-sp13_S_contig1909.6077.1 vs. uniprot
Match: D7FVQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ0_ECTSI)

HSP 1 Score: 922 bits (2382), Expect = 0.000e+0
Identity = 832/1194 (69.68%), Postives = 852/1194 (71.36%), Query Frame = 0
Query:    1 MIPHRASCSPRRISDRTPVVARTLAPAGEQANLPDLAEPIPHQPTAPGACPPNKTQGRGSEPAVAHGEADAVDSGQPPSSTPQTSARGPPAAATEASTASPLPSPSASPRAISSQPRKRGRQWPKPAPQPSAVELEAAPETNTPATPERVPPPDKMGRSRNTPLPPAAADQAATSDLRKRXXXXXXXXXXXXXXXXXIPDLRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQRATPSNSAPLSPVGTPTPRQVAAAVRAAATVAASPQPQPPASLQTAGDIVRLTASPTRQRRSPRIEGAASLGRPEIAPTSEATTPAAAAARRQQRSEAIPERSLPLRKRNRPSNTTPPSAPALATAGPPRQTAHEEGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATDSTRSTPTEKSRPGVLRGLPPCRPDQQRLAAEPREEVDIPAGGNADGSAEIGSRSGKMRRKAQLSAGQRQXXXXXXXXXPEANPPPANHAQDGAGADIGRHVDGGGSVGDCGEDFGG-GGGSVDGGSCNEMNEGGSHVAREEEGRVASSVQQVDGSAKAGGPRNNKRGAVSSGALRSQSRRKVRELADPPAGNERYRGIPRSACGGGGGTSDVSKNETEGPTTTRDEDLALIWEMHQEREGLLAVRKRLRTEVVTLQDEEDELRLVLGLPPARSELVLPTXXXXXXXXVEPPKAVAPAKKKHRPNRQRXTTPPA-QGEPXXXXXXXXXXXXXXAAANGASISPQRPSPSVAIGAXXXXXXXXXXXXSPPRALPSV-TTPXXXXXXXXXXXXXXPCVSPPRTERSPVAAASSRSSSIAAASSPQALASAPGSDDTPMGSPLSLPVPGSPVGSFDLASGENDDIEKLLLGLDSMTGDXXXXXXXXXXXIIAPAGGLGGLRHRGAGPAPLPPLPSSGGAPMGARQQPFARERTAGSEPQLSGRRGSGGLNQPESVAGRGTAVGNGVRGQQQPGRGKQLMSSGRGGVALGGRGRGRGARRAPNYLDLNASFLRRPAGRGVASARGGRLGSGSXXXXXXXGRGPPVVGSXXXGRRNXXXXXXXXXXXXXXXXXXXXXXXSCGGRVGGRGHLVRGATGSPGAPCAGGVRYKEPVGVAQPSVEHTSTGGARVTTVSPGDACLPGGSGRPPGL 1191
            MIP RASCSPRRISDRTPVV RT APAGE+ANLP+LAEPIPHQ TAPG     +TQGRGSEPAVAHGEADAVDSGQP SSTPQTSA GP AAATE                                   S+ ELEA PE NTPATPERVPPPDK GR R TPLPPAAADQAA  DLRK XXXXXXXXXXXXXXXXX   L R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                                                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      R+TP+  + P  + G P   P QQRL AEPREEVDIPAG NADGSAE GS+SGKMRRKAQLSAGQRQ         PEANPPPANHAQDGAGADIGRHVD GGSVGDCGEDFGG GGGSVDGGSCNEMNEGGSHV REEEGRVASS QQVDGS KAGG    KR AVSSGALRSQSRRK RELADPPAGNER+RGIPRS  GGGGGTSD +K+ETEGPTTTRDEDLAL+ EMHQE EGLLAVRKRLR EVVTLQDEEDELRLVLGLPPARSELVLPT  XXXXXX                    X      QGEP              AAANGAS+SPQ PSPSVA+GAXXXXXXXXXXXX           TP  XXXXXXXXXX  P VSP RTERSPVAAASSRSSSIAAASSPQALASAPG+DDTPMGSPLSLPVPGSPVGSFDLA  ENDDIEKLLLGLDSMTGDXXXXXXXXXX   APAGGLGGLRHRG GPA      S GGAP+GARQQP ARERTAGSEPQLSGRRG+GGLNQPESVAGRGTAVGN VRGQQ+PGRGKQL+SSGRGGVA GGRGRGRGARRAPNYLDLNASFLRRPAGRG A  RGGRLGSGSXXXXXXX  GPPVVGSXXX    XXXXXXXXXXXXXXXXXXXXXXX   GRVGGRGHLVRGATGSPGAP AGGVR  EPVGVAQ SVE TSTGGARVTTVSPGDACLPGGSGRPPGL
Sbjct:    1 MIPRRASCSPRRISDRTPVVPRTPAPAGEEANLPELAEPIPHQSTAPGTG--GQTQGRGSEPAVAHGEADAVDSGQPSSSTPQTSAGGPTAAATEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAELEAPPEINTPATPERVPPPDKTGRPRKTPLPPAAADQAANPDLRKXXXXXXXXXXXXXXXXXXXXXLPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRATPSNSAPPSPV-GTP--TPRQQRLPAEPREEVDIPAGRNADGSAEPGSKSGKMRRKAQLSAGQRQQQQS-----PEANPPPANHAQDGAGADIGRHVDDGGSVGDCGEDFGGNGGGSVDGGSCNEMNEGGSHVTREEEGRVASSEQQVDGSVKAGGVGKKKRAAVSSGALRSQSRRKARELADPPAGNERHRGIPRSTRGGGGGTSDGNKDETEGPTTTRDEDLALVREMHQESEGLLAVRKRLRREVVTLQDEEDELRLVLGLPPARSELVLPTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGEPSVATGTSSCSSSSPAAANGASVSPQHPSPSVAMGAXXXXXXXXXXXXXXXXXXXXXXATPSSXXXXXXXXXXARPSVSPSRTERSPVAAASSRSSSIAAASSPQALASAPGNDDTPMGSPLSLPVPGSPVGSFDLAPAENDDIEKLLLGLDSMTGDXXXXXXXXXX--XAPAGGLGGLRHRGVGPAXXXXXXSFGGAPIGARQQPLARERTAGSEPQLSGRRGNGGLNQPESVAGRGTAVGNSVRGQQRPGRGKQLLSSGRGGVASGGRGRGRGARRAPNYLDLNASFLRRPAGRGAA--RGGRLGSGSXXXXXXXXXGPPVVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGRVGGRGHLVRGATGSPGAPGAGGVRENEPVGVAQHSVEQTSTGGARVTTVSPGDACLPGGSGRPPGL 1080          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1909.6077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LAT0_9PHAE0.000e+080.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVQ0_ECTSI0.000e+069.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 694..714
IPR017956AT hook, DNA-binding motifSMARTSM00384AT_hook_2coord: 227..239
e-value: 7.2
score: 10.4
coord: 177..189
e-value: 380.0
score: 0.7
coord: 202..214
e-value: 13.0
score: 9.0
coord: 252..264
e-value: 20.0
score: 8.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1909contigEcto-sp13_S_contig1909:2296..7815 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1909.6077.1mRNA_Ecto-sp13_S_contig1909.6077.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1909 2296..7815 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1909.6077.1 ID=prot_Ecto-sp13_S_contig1909.6077.1|Name=mRNA_Ecto-sp13_S_contig1909.6077.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1192bp
MIPHRASCSPRRISDRTPVVARTLAPAGEQANLPDLAEPIPHQPTAPGAC
PPNKTQGRGSEPAVAHGEADAVDSGQPPSSTPQTSARGPPAAATEASTAS
PLPSPSASPRAISSQPRKRGRQWPKPAPQPSAVELEAAPETNTPATPERV
PPPDKMGRSRNTPLPPAAADQAATSDLRKRGRRRKTPLEPAASDQATIPD
LRRKRGRSRKTPLEPAASDETTTPDLPCKRGRPRKTPLEPAASEESTTPD
LPRKKGRPRKTPLEPAVADKATTPAQQRATPSNSAPLSPVGTPTPRQVAA
AVRAAATVAASPQPQPPASLQTAGDIVRLTASPTRQRRSPRIEGAASLGR
PEIAPTSEATTPAAAAARRQQRSEAIPERSLPLRKRNRPSNTTPPSAPAL
ATAGPPRQTAHEEGDDGSSSSSNSDSSGDSSWTSGASGASTNNTAKLATD
STRSTPTEKSRPGVLRGLPPCRPDQQRLAAEPREEVDIPAGGNADGSAEI
GSRSGKMRRKAQLSAGQRQQQQQQQQQSPEANPPPANHAQDGAGADIGRH
VDGGGSVGDCGEDFGGGGGSVDGGSCNEMNEGGSHVAREEEGRVASSVQQ
VDGSAKAGGPRNNKRGAVSSGALRSQSRRKVRELADPPAGNERYRGIPRS
ACGGGGGTSDVSKNETEGPTTTRDEDLALIWEMHQEREGLLAVRKRLRTE
VVTLQDEEDELRLVLGLPPARSELVLPTPPPPLPSPVEPPKAVAPAKKKH
RPNRQRRTTPPAQGEPSAATGTSSCSSSSPAAANGASISPQRPSPSVAIG
ASSSSATASSAGASPPRALPSVTTPSSSPAAAVSAGVAPPCVSPPRTERS
PVAAASSRSSSIAAASSPQALASAPGSDDTPMGSPLSLPVPGSPVGSFDL
ASGENDDIEKLLLGLDSMTGDDDDDDDDDDDDIIAPAGGLGGLRHRGAGP
APLPPLPSSGGAPMGARQQPFARERTAGSEPQLSGRRGSGGLNQPESVAG
RGTAVGNGVRGQQQPGRGKQLMSSGRGGVALGGRGRGRGARRAPNYLDLN
ASFLRRPAGRGVASARGGRLGSGSRGGRSGGGRGPPVVGSGRGGRRNGPV
GVGGGSAAARPGGGGLGSGASCGGRVGGRGHLVRGATGSPGAPCAGGVRY
KEPVGVAQPSVEHTSTGGARVTTVSPGDACLPGGSGRPPGL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017956AT_hook_DNA-bd_motif