mRNA_Ecto-sp13_S_contig18993.6020.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18993.6020.1 vs. uniprot
Match: D7G4L5_ECTSI (NDK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L5_ECTSI) HSP 1 Score: 560 bits (1443), Expect = 3.680e-199 Identity = 285/301 (94.68%), Postives = 289/301 (96.01%), Query Frame = 1
Query: 1 MERNEVVFVLGGPGSGKGTHCARIAADFGYTHLSTGDLLREEQKKESELAIKIAECIRDGQLVPSSTMVALLKEAILKGDSRRFLLDGFPRSKDNLEAWFGAFSDEEIQQVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELERLGMVRKVSTVPARELVAHRVSRYFKGCRLVDPVERTLALIKPDATRNAGDILNRVEQEGFVVVGKIEGRSWSQQDAATFYSEHRGKAFFDTLVDFMSSGPIVQLCLEKVGAIKAWRELAGPTNSTDAKTSEPTSIR 903
MERNEVVFVLGGPGSGKGTHCARIAA+FGYTHLSTGDLLREEQKKESELA KIAECIRDGQLVPSSTMVALLKEAIL GDS+RFLLDGFPRSKDNLEAWF AFSDEEIQ VSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEEL RLGMVRKVSTVPARELVAHRV RYFKGCRLVDPVERTLALIKPDAT N +ILNRVEQEGFVVVGKIEGR WSQQDAATFYSEH GKAFFDTLVDFMSSGPIVQLCLEKVGAIKAWRELAGPTNSTDAKT EP+SIR
Sbjct: 1 MERNEVVFVLGGPGSGKGTHCARIAAEFGYTHLSTGDLLREEQKKESELATKIAECIRDGQLVPSSTMVALLKEAILNGDSKRFLLDGFPRSKDNLEAWFDAFSDEEIQ-VSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELRRLGMVRKVSTVPARELVAHRVRRYFKGCRLVDPVERTLALIKPDATGNTNEILNRVEQEGFVVVGKIEGRVWSQQDAATFYSEHSGKAFFDTLVDFMSSGPIVQLCLEKVGAIKAWRELAGPTNSTDAKTLEPSSIR 300
BLAST of mRNA_Ecto-sp13_S_contig18993.6020.1 vs. uniprot
Match: A0A6H5KI40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI40_9PHAE) HSP 1 Score: 437 bits (1125), Expect = 1.200e-149 Identity = 222/234 (94.87%), Postives = 227/234 (97.01%), Query Frame = 1
Query: 202 MVALLKEAILKGDSRRFLLDGFPRSKDNLEAWFGAFSDEEIQQVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELERLGMVRKVSTVPARELVAHRVSRYFKGCRLVDPVERTLALIKPDATRNAGDILNRVEQEGFVVVGKIEGRSWSQQDAATFYSEHRGKAFFDTLVDFMSSGPIVQLCLEKVGAIKAWRELAGPTNSTDAKTSEPTSIR 903
MVALLKEAILKGDS+RFLLDGFPRSKDNLEAWF AFSDEEIQ VSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPV EELERLGMVRKVSTVPA+ELVAHRVSRYFKGCRLVDPVERTLALIKPDAT N G+ILNRVEQEGFVVVGKIEGR WSQQDAATFYSEHRGKAFFDTLVDFMSSGPIVQLCLEKVGAIKAW+ELAGPTNSTDAKT EP+SIR
Sbjct: 1 MVALLKEAILKGDSKRFLLDGFPRSKDNLEAWFDAFSDEEIQ-VSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVFEELERLGMVRKVSTVPAQELVAHRVSRYFKGCRLVDPVERTLALIKPDATGNTGEILNRVEQEGFVVVGKIEGRMWSQQDAATFYSEHRGKAFFDTLVDFMSSGPIVQLCLEKVGAIKAWKELAGPTNSTDAKTLEPSSIR 233
BLAST of mRNA_Ecto-sp13_S_contig18993.6020.1 vs. uniprot
Match: A0A835YVW4_9STRA (UMP-CMP kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVW4_9STRA) HSP 1 Score: 300 bits (767), Expect = 7.580e-93 Identity = 157/303 (51.82%), Postives = 204/303 (67.33%), Query Frame = 1
Query: 1 MERNEVVFVLGGPGSGKGTHCARIAADFGYTHLSTGDLLREEQKKESELAIKIAECIRDGQLVPSSTMVALLKEAILKGDSRRFLLDGFPRSKDNLEAWFGAFSDEEIQQVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELERLGMVRKVSTVPARELVAHRVSRYFKGCRLVDPVERTLALIKPDATRNAGD--ILNRVEQEGFVVVGKIEGRSWSQQDAATFYSEHRGKAFFDTLVDFMSSGPIVQLCLEKVGAIKAWRELAGPTNSTDAKTSEPTSIR 903
+ R VVFVLGGPGSGKGT CA I +FGYTHLS GDLLREEQ S++ I I++G++VP + LLK A+ + +R FL+DGFPRS +N+E WF D + +V+F LF CP+E + +RLL+RG TSGRADDN ++ KRF TF S+PVVE L RLG VR VS P E+V RVSR+FKG ++ P ERTLA+IKPDA + ++ R+EQEGFV+V K + + + + FY EH GK FF+ L FM+SGP L LE+V AI+AWR L GPTN+ A+ +P S+R
Sbjct: 212 IRRYSVVFVLGGPGSGKGTQCANIVREFGYTHLSAGDLLREEQNCGSDVGEMIKTFIKEGKIVPVEVTIRLLKTAMERSGARDFLIDGFPRSFENMEGWFKEMGD--VAEVAFVLFFDCPEEVMAERLLKRGATSGRADDNEASIRKRFVTFRDTSMPVVEALARLGKVRIVSAAPPPEVVFARVSRFFKGLAMIPPTERTLAIIKPDAMAAGSEPAMIQRLEQEGFVIVEK-KTETLTSEKVDGFYQEHIGKPFFEGLKKFMTSGPCTALSLERVDAIRAWRNLLGPTNTEKARAEKPDSLR 511
BLAST of mRNA_Ecto-sp13_S_contig18993.6020.1 vs. uniprot
Match: A0A6V1RU54_HETAK (UMP-CMP kinase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RU54_HETAK) HSP 1 Score: 299 bits (766), Expect = 9.560e-93 Identity = 152/303 (50.17%), Postives = 205/303 (67.66%), Query Frame = 1
Query: 1 MERNEVVFVLGGPGSGKGTHCARIAADFGYTHLSTGDLLREEQKKESELAIKIAECIRDGQLVPSSTMVALLKEAILKGDSRRFLLDGFPRSKDNLEAWFGAFSDEEIQQVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELERLGMVRKVSTVPARELVAHRVSRYFKGCRLVDPVERTLALIKPDATR--NAGDILNRVEQEGFVVVGKIEGRSWSQQDAATFYSEHRGKAFFDTLVDFMSSGPIVQLCLEKVGAIKAWRELAGPTNSTDAKTSEPTSIR 903
+ + +V+FVLGGPGSGKGT CA + D+G+ HLS GDLLREE+++ A I IR+G++VP V L+K A+ + R+FL+DGFPRS DN E WF D+ VS LF CP+E + +RLL+RGE+SGR DDN+E + KRF TF +S+PVVE RLG+VR+VS+V ++V +V + G L P +RTLA+IKPDA R A +I+ R++ EGFVVV + E + S+ FY+EH+GK+FF+TL FM+SGP+ LCLEK GA+K WR L GPTN+ AK P S+R
Sbjct: 212 LTKPQVIFVLGGPGSGKGTQCANLVRDYGFVHLSAGDLLREERQRGGPNAELIENYIREGKIVPVEITVGLIKAAMEQSGGRKFLVDGFPRSLDNTEGWFAVMGDDVA--VSMVLFFDCPEEVMTQRLLKRGESSGRIDDNIEAIQKRFRTFRDQSMPVVENFRRLGLVREVSSVAPVDVVYSKVRQLLDGLALCPPRQRTLAMIKPDAVRAGKADEIVQRLQAEGFVVVARKEA-TLSRAQVEEFYAEHKGKSFFETLAGFMTSGPMQALCLEKEGAVKGWRALMGPTNTEKAKAEAPQSLR 511
BLAST of mRNA_Ecto-sp13_S_contig18993.6020.1 vs. uniprot
Match: F6UHS2_CIOIN (UMP-CMP kinase n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6UHS2_CIOIN) HSP 1 Score: 180 bits (457), Expect = 1.430e-52 Identity = 94/193 (48.70%), Postives = 127/193 (65.80%), Query Frame = 1
Query: 1 MERNEVVFVLGGPGSGKGTHCARIAADFGYTHLSTGDLLREEQKK-ESELAIKIAECIRDGQLVPSSTMVALLKEAILKGDSRRFLLDGFPRSKDNLEAWFGAFSDEEIQQ---VSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELERLGMVRKVSTVPARELVAHRVSRYF 567
M + ++VFVLGGPG+GKGT C++I FGYTHLS GDLLR E+K S++ I CI++G++VP LLK AI + +FL+DGFPR+KDNL+ W DEE+ V F L+L CP+E KR+L RG TSGR DDNVE++ KRF T+ E+LP+++ E+ G VR V T + V RV ++F
Sbjct: 24 MSKPQIVFVLGGPGAGKGTQCSKIVETFGYTHLSAGDLLRAERKNPSSKVGTLIERCIKEGKIVPVKITCGLLKTAIFANKNTKFLIDGFPRNKDNLDGW-----DEEMGDKVDVQFILYLDCPEEVCTKRILNRGLTSGRTDDNVESLKKRFQTYVNETLPIIKHYEKDGKVRSVVTDCTPDEVFERVRKHF 211
BLAST of mRNA_Ecto-sp13_S_contig18993.6020.1 vs. uniprot
Match: A0A7S0M1V9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M1V9_9CRYP) HSP 1 Score: 184 bits (467), Expect = 8.140e-52 Identity = 95/189 (50.26%), Postives = 128/189 (67.72%), Query Frame = 1
Query: 1 MERNEVVFVLGGPGSGKGTHCARIAADFGYTHLSTGDLLREEQKKESELAIKIAECIRDGQLVPSSTMVALLKEAILKGDSRRFLLDGFPRSKDNLEAWFGAFSDEEIQQVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELERLGMVRKVSTVPARELVAHRVSRYF 567
+ + +VVFVLGGPG+GKGT CA I ++G+ HLS GDLLR E++ SE A I I++G++VP V LL A+ K ++FL+DGFPRS DN + W+ D+ +V+F LF CP+EEL+KRLL+RGETSGR DDN+E++ KRF TF++ S+PVVE GM+R VS+V E V R F
Sbjct: 169 VPKPQVVFVLGGPGAGKGTQCANIVREYGWVHLSAGDLLRAERESGSENAAMINSFIKEGKIVPVEVTVKLLLAAMEKNPGKKFLIDGFPRSMDNKDGWYSVVGDKA--EVAFCLFYDCPEEELEKRLLKRGETSGRDDDNIESIKKRFRTFKETSMPVVEWFGSRGMLRTVSSVQTVEEVWAATKRVF 355
BLAST of mRNA_Ecto-sp13_S_contig18993.6020.1 vs. uniprot
Match: UPI0009E5DDD4 (UMP-CMP kinase-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5DDD4) HSP 1 Score: 177 bits (449), Expect = 2.340e-51 Identity = 83/186 (44.62%), Postives = 127/186 (68.28%), Query Frame = 1
Query: 16 VVFVLGGPGSGKGTHCARIAADFGYTHLSTGDLLREEQKKESELAIKIAECIRDGQLVPSSTMVALLKEAILKGDSRRFLLDGFPRSKDNLEAWFGAFSDEEIQQVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELERLGMVRKVSTVPARELVAHRVSRYFKG 573
V+FVLGGPG+GKGT C RI +FGY HLS GDLLREE+ SE I CI++G++VP ++L+++A+ K ++FL+DGFPR++DNL+ W E VS LF C ++E KR++ERG++SGR+DDN+E++ KRF T+E +++P++E ++LG+VRK+ + + + V V +
Sbjct: 27 VIFVLGGPGAGKGTQCERIVEEFGYIHLSAGDLLREERASGSENGDLIESCIKEGKIVPVEITISLIEKAMNKNSVKKFLIDGFPRNEDNLQGWKRVM--EGKVDVSCVLFFECAEDECIKRIMERGKSSGRSDDNIESLRKRFYTYETQTMPIIEHYQKLGLVRKIQAIKSPDEVFEEVQSVLRS 210
BLAST of mRNA_Ecto-sp13_S_contig18993.6020.1 vs. uniprot
Match: H2ZHH9_CIOSA (UMP-CMP kinase n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZHH9_CIOSA) HSP 1 Score: 176 bits (445), Expect = 4.740e-51 Identity = 89/189 (47.09%), Postives = 128/189 (67.72%), Query Frame = 1
Query: 4 ERNEVVFVLGGPGSGKGTHCARIAADFGYTHLSTGDLLREEQKK-ESELAIKIAECIRDGQLVPSSTMVALLKEAILKGDSRRFLLDGFPRSKDNLEAWFGAFSDEEIQQVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELERLGMVRKVSTVPARELVAHRVSRYF 567
++ ++VFVLGGPG+GKGT CA+I FGYTHLS GDLLR E+K ESE+ I I +G++VP LL++AI ++ +FL+DGFPR++DNL W D+ +V F L+L CPKE +R+L RG+TSGR+DDNVE++ KRF+T+ E++P+++ E VR V T + + V RV ++F
Sbjct: 4 KKPQIVFVLGGPGAGKGTQCAKIVEKFGYTHLSAGDLLRAERKNPESEVGNLIETYITEGKIVPVKITCGLLEKAISSSENNKFLIDGFPRNEDNLTGWSDQMGDKV--EVKFVLYLDCPKEICTERILNRGKTSGRSDDNVESLHKRFETYVNETIPIIKHYEAENKVRHVLTEVSADEVFERVKKHF 190
BLAST of mRNA_Ecto-sp13_S_contig18993.6020.1 vs. uniprot
Match: W4G8P5_9STRA (UMP-CMP kinase n=6 Tax=Aphanomyces TaxID=100860 RepID=W4G8P5_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.180e-50 Identity = 89/203 (43.84%), Postives = 132/203 (65.02%), Query Frame = 1
Query: 7 RNEVVFVLGGPGSGKGTHCARIAADFGYTHLSTGDLLREEQKKESELAIKIAECIRDGQLVPSSTMVALLKEAILKGDSRRFLLDGFPRSKDNLEAWFGAFSDEEIQQVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELERLGMVRKVSTVPARELVAHRVSRYFKGC---RLVDPVERTL 606
R++V+FVLGGPGSGKGT C++I A FG+ HLS GDLLREE+ S I IRDG +VP + L+++A+L+ FL+DGFPR+ DNLE W +D ++ V LF CP+EE++KRLLERG+TSGR DDN++ + KRF T+ + ++P++E V ++S++P+ ++V ++ + LVD +R L
Sbjct: 7 RSKVLFVLGGPGSGKGTQCSKIVAKFGFVHLSAGDLLREERSSGSPNGDMIDRMIRDGAIVPVKVTLDLIRKAMLESGRDLFLIDGFPRNFDNLEGWEAEMTDVDVAGV---LFYDCPEEEMEKRLLERGKTSGRTDDNIDAIRKRFTTYLESTMPIIEHFALKDQVFRISSIPSPDVVFDETAKVIEPIVKRHLVDSTQRLL 206
BLAST of mRNA_Ecto-sp13_S_contig18993.6020.1 vs. uniprot
Match: A0A7S2C1B9_9STRA (UMP-CMP kinase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1B9_9STRA) HSP 1 Score: 176 bits (445), Expect = 2.160e-50 Identity = 94/199 (47.24%), Postives = 133/199 (66.83%), Query Frame = 1
Query: 4 ERNEVVFVLGGPGSGKGTHCARIAADFGYTHLSTGDLLREEQKKESELAIKIAECIRDGQLVPSSTMVALLKEAILKGDSRRFLLDGFPRSKDNLEAWFGAFSDEEIQQVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELERLGMVRKVSTVPARELVAHRVSRYFKGCRLVDPVER 600
+R +VVFVLGGPGSGKGT CARI +FG+ HLS GDLLR E+K SEL I I+ G +VP+ V LL EA+ K ++ FL+DGFPR+ DNLE W + +++ F L L CP+E +++RLL+RGETSGR+DDN+E++ KRF T+++ ++PVV+ + VR+V + A E V V C + +P+E+
Sbjct: 39 DRPKVVFVLGGPGSGKGTMCARIVEEFGFMHLSAGDLLRAERKSGSELGDMIEGHIQAGSIVPAEVTVRLLDEAMKKSEATCFLVDGFPRNADNLECWVKLMTHCKVE---FVLMLECPEEVMEQRLLKRGETSGRSDDNIESIRKRFKTYKESTMPVVQVFAKENKVREVVSDRAPEEVYADVRTAI--CEVTEPLEQ 232 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18993.6020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18993.6020.1 >prot_Ecto-sp13_S_contig18993.6020.1 ID=prot_Ecto-sp13_S_contig18993.6020.1|Name=mRNA_Ecto-sp13_S_contig18993.6020.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp MERNEVVFVLGGPGSGKGTHCARIAADFGYTHLSTGDLLREEQKKESELAback to top mRNA from alignment at Ecto-sp13_S_contig18993:23..3073- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18993.6020.1 ID=mRNA_Ecto-sp13_S_contig18993.6020.1|Name=mRNA_Ecto-sp13_S_contig18993.6020.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3051bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18993:23..3073- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18993:23..3073- >mRNA_Ecto-sp13_S_contig18993.6020.1 ID=mRNA_Ecto-sp13_S_contig18993.6020.1|Name=mRNA_Ecto-sp13_S_contig18993.6020.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=906bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18993:23..3073- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |