prot_Ecto-sp13_S_contig18961.6007.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18961.6007.1 vs. uniprot
Match: D8LPK1_ECTSI (EsV-1-182, RFC small subunit n=2 Tax=root TaxID=1 RepID=D8LPK1_ECTSI) HSP 1 Score: 169 bits (427), Expect = 1.230e-49 Identity = 81/107 (75.70%), Postives = 93/107 (86.92%), Query Frame = 0
Query: 1 VTPESIVEISGEVPERVFDELWSAVTSRPQFGHFEAVTDAVSAFVGEGYPVGKVLSEIQNRVVRSSEVVDADKALVCLRLLETDRCLNDGADEELQLLDVCFVVQSA 107
VTPES+VE++GEVPER FD LWSAVTS HFE V DAVS FVGEGYPVGKVLSEIQ+RVV+S E+ +ADKA++CL L+ETDRCLNDGADEELQLL++C VVQSA
Sbjct: 219 VTPESVVEVAGEVPERAFDTLWSAVTSPSHLEHFEDVVDAVSTFVGEGYPVGKVLSEIQSRVVQSGELENADKAVICLELMETDRCLNDGADEELQLLNICLVVQSA 325
BLAST of mRNA_Ecto-sp13_S_contig18961.6007.1 vs. uniprot
Match: A0A7S2V1U9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U9_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 4.410e-21 Identity = 42/104 (40.38%), Postives = 61/104 (58.65%), Query Frame = 0
Query: 1 VTPESIVEISGEVPERVFDELWSAVTSRPQFGHFEAVTDAVSAFVGEGYPVGKVLSEIQNRVVRSSEVVDADKALVCLRLLETDRCLNDGADEELQLLDVCFVV 104
+T + I EISG +P LW+A+ S G F+ + + V EG+P+G +L +Q V+ + D KA +CLR+ E D+CLNDGA E LQLLD+ V+
Sbjct: 38 ITEDDIAEISGSIPHGATTALWTAMKS----GRFDNIENEVEKMACEGFPIGALLHRLQEEVIEEDGIEDIHKAAICLRIAEADKCLNDGASEALQLLDIAAVI 137
BLAST of mRNA_Ecto-sp13_S_contig18961.6007.1 vs. uniprot
Match: A0A6H5JEB4_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEB4_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 4.990e-20 Identity = 45/103 (43.69%), Postives = 65/103 (63.11%), Query Frame = 0
Query: 1 VTPESIVEISGEVPERVFDELWSAVTSRPQFGHFEAVTDAVSAFVGEGYPVGKVLSEIQNRVVRSSEVVDADKALVCLRLLETDRCLNDGADEELQLLDVCFV 103
VTPE +V+I+G++P V D LWSA+ S G + + AV F+ GYP+ +L ++Q V + + D +KA +C R+ E DRCL DG +EELQLLD+ V
Sbjct: 248 VTPEVLVDIAGKIPAEVKDALWSAIKS----GSYHKIVAAVDDFMSSGYPLSTLLEDMQEATVADTTIPDHNKADICRRIAEADRCLIDGCNEELQLLDLASV 346
BLAST of mRNA_Ecto-sp13_S_contig18961.6007.1 vs. uniprot
Match: D8SR37_SELML (AAA domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SR37_SELML) HSP 1 Score: 92.0 bits (227), Expect = 6.300e-20 Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0
Query: 1 VTPESIVEISGEVPERVFDELWSAVTSRPQFGHFEAVTDAVSAFVGEGYPVGKVLSEIQNRVVRSSEVVDADKALVCLRLLETDRCLNDGADEELQLLDVC 101
+T + I+ +SG +P+ V L A TS G F+ V+ + EGYPV ++ S++ + VV S E+ D KA +C RL E D+CL DGADE LQL+DVC
Sbjct: 232 ITSKDILSVSGVIPDNVIQSLLQACTS----GVFDQAQKEVTNIIAEGYPVSQIFSQVYDHVVESPEISDEQKAKICQRLAEADKCLLDGADESLQLMDVC 328
BLAST of mRNA_Ecto-sp13_S_contig18961.6007.1 vs. uniprot
Match: A0A2J6LT11_LACSA (AAA domain-containing protein n=6 Tax=Asteraceae TaxID=4210 RepID=A0A2J6LT11_LACSA) HSP 1 Score: 87.0 bits (214), Expect = 4.370e-18 Identity = 43/108 (39.81%), Postives = 68/108 (62.96%), Query Frame = 0
Query: 1 VTPESIVEISGEVPERVFDELWSAVTSRPQFGHFEAVTDAVSAFVGEGYPVGKVLSEIQNRVVRSSEVVDADKALVCLRLLETDRCLNDGADEELQLLDVCFVVQSAF 108
++ + ++ +SG VP+ V +L ++ S G F++ V+ + EGYPV ++LS++ + VV S +V D KA +C +L E+D+CL DGADE LQLLD C + AF
Sbjct: 229 ISSKDLISVSGVVPQEVVGDLLASCKS----GSFDSANKQVNNVIAEGYPVSQILSQLFDLVVESDDVSDEQKARICRKLGESDKCLVDGADEYLQLLDACSCMIKAF 332
BLAST of mRNA_Ecto-sp13_S_contig18961.6007.1 vs. uniprot
Match: A0A0A9E9J4_ARUDO (Replication factor C subunit 2 n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9E9J4_ARUDO) HSP 1 Score: 82.0 bits (201), Expect = 1.840e-17 Identity = 40/100 (40.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query: 1 VTPESIVEISGEVPERVFDELWSAVTSRPQFGHFEAVTDAVSAFVGEGYPVGKVLSEIQNRVVRSSEVVDADKALVCLRLLETDRCLNDGADEELQLLDV 100
++ ++ +SG +PE V L++A S G F+ VS + +GYPV +++S+ + +V + ++ D KA VC +L ETD+CL DGADE LQLLDV
Sbjct: 50 ISSSDLISVSGVIPEDVVKSLFAACKS----GEFDVANKEVSNIIADGYPVSQLISQFLDVIVSADDIPDEQKARVCKKLGETDKCLVDGADEYLQLLDV 145
BLAST of mRNA_Ecto-sp13_S_contig18961.6007.1 vs. uniprot
Match: V7AYX4_PHAVU (Rep_fac_C domain-containing protein (Fragment) n=2 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7AYX4_PHAVU) HSP 1 Score: 80.5 bits (197), Expect = 2.890e-17 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 0
Query: 1 VTPESIVEISGEVPERVFDELWSAVTSRPQFGHFEAVTDAVSAFVGEGYPVGKVLSEIQNRVVRSSEVVDADKALVCLRLLETDRCLNDGADEELQLLDVCFVVQSAF 108
++ E+++ +SG VPE+V + A S G+F+ V+ F+ EGYP ++L+++ +V +++ D KA + +L E D+CL DGADE LQLLDV AF
Sbjct: 10 ISSENLISVSGVVPEKVVQAVLQACRS----GNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEDNDISDEQKARISKKLGEADKCLVDGADEYLQLLDVVSNTMQAF 113
BLAST of mRNA_Ecto-sp13_S_contig18961.6007.1 vs. uniprot
Match: A0A6J1IVB8_CUCMA (replication factor C subunit 4 n=2 Tax=Cucurbita TaxID=3660 RepID=A0A6J1IVB8_CUCMA) HSP 1 Score: 84.7 bits (208), Expect = 3.010e-17 Identity = 41/100 (41.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query: 1 VTPESIVEISGEVPERVFDELWSAVTSRPQFGHFEAVTDAVSAFVGEGYPVGKVLSEIQNRVVRSSEVVDADKALVCLRLLETDRCLNDGADEELQLLDV 100
++ + ++ +SG +P V DEL++A S G+F+ V+ + EGYPV ++LS+I V+ + ++ D KA +C +L E D+CL DGADE LQLLDV
Sbjct: 228 ISSKDLISVSGIIPREVVDELFAACKS----GNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKICKKLAEADKCLVDGADEYLQLLDV 323
BLAST of mRNA_Ecto-sp13_S_contig18961.6007.1 vs. uniprot
Match: A0A5A7QVC2_STRAF (Replication factor C subunit n=2 Tax=Lamiales TaxID=4143 RepID=A0A5A7QVC2_STRAF) HSP 1 Score: 84.3 bits (207), Expect = 5.350e-17 Identity = 41/100 (41.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query: 1 VTPESIVEISGEVPERVFDELWSAVTSRPQFGHFEAVTDAVSAFVGEGYPVGKVLSEIQNRVVRSSEVVDADKALVCLRLLETDRCLNDGADEELQLLDV 100
++ + ++ +SG +PE V L+SA S G+F+ V + EGYPV ++LS++ + +V ++ D KA +C +L ETD+CL DGADE LQLLDV
Sbjct: 253 ISSKDLISVSGVIPEDVVQALFSACKS----GNFDTADKEVKNVIAEGYPVSQMLSQLYDVLVELDDIADDQKARICKKLAETDKCLVDGADEYLQLLDV 348
BLAST of mRNA_Ecto-sp13_S_contig18961.6007.1 vs. uniprot
Match: A0A068UQY2_COFCA (Rep_fac_C domain-containing protein n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068UQY2_COFCA) HSP 1 Score: 81.6 bits (200), Expect = 6.430e-17 Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query: 1 VTPESIVEISGEVPERVFDELWSAVTSRPQFGHFEAVTDAVSAFVGEGYPVGKVLSEIQNRVVRSSEVVDADKALVCLRLLETDRCLNDGADEELQLLDV 100
++ ++ +SG +PE V L+SA S G+F+ V + EGYPV ++LS++ + VV + ++ D KA +C +L E D+CL DGADE LQLLDV
Sbjct: 90 ISSRDLISVSGVIPEDVVQALYSACRS----GNFDLADKEVKNVIAEGYPVSQMLSQLFDLVVEADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDV 185 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18961.6007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig18961.6007.1 ID=prot_Ecto-sp13_S_contig18961.6007.1|Name=mRNA_Ecto-sp13_S_contig18961.6007.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=109bpback to top |