mRNA_Ecto-sp13_S_contig1894.5997.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1894.5997.1 vs. uniprot
Match: A0A6H5JWL4_9PHAE (ACB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWL4_9PHAE) HSP 1 Score: 404 bits (1038), Expect = 5.370e-138 Identity = 268/281 (95.37%), Postives = 273/281 (97.15%), Query Frame = 1
Query: 1 MAAMEPPSVCDEDTERLFGMAANHMITVKGVALSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGVEPVEAMKSYLLKVTELCPDWLAEAQGQPPGDAGTVTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMAAGQGNTAEWGANEEIFAAASDGDVVQIRDLVSSGVKVDAQDEEGRTPLHFAADRGQSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAEESVKHLLIRPDCSAA 843
MAAMEPPSVCDEDTERLFGMAANHMITVKGVALSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRG+EPVEAMKSYLLKVTELCPDWLAEAQGQPPG+AG VTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMA GQGNTAEWGANEEIFAAAS+GDVV+IRDLVSSGVKVDAQDEEGRTPLHFAADR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAEESVKHLLIRP+ SAA
Sbjct: 1 MAAMEPPSVCDEDTERLFGMAANHMITVKGVALSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGMEPVEAMKSYLLKVTELCPDWLAEAQGQPPGNAGMVTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMATGQGNTAEWGANEEIFAAASEGDVVRIRDLVSSGVKVDAQDEEGRTPLHFAADRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAEESVKHLLIRPEGSAA 281
BLAST of mRNA_Ecto-sp13_S_contig1894.5997.1 vs. uniprot
Match: A0A7S4V181_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4V181_GUITH) HSP 1 Score: 112 bits (280), Expect = 4.750e-25 Identity = 68/189 (35.98%), Postives = 108/189 (57.14%), Query Frame = 1
Query: 52 FGMAANHMITVKGVALSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGVEPVEAMKSYLLKVTELCPDWLAEAQGQPPGDAGTVT-QEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMAAGQGNTAEWGANEEIFAAASDGDVVQIRDLVSSGVKVDAQDEEGRTPLHFAADRGQS 615
F AAN+ I +LSS+Q+L LY+L+KQAT G C+ PKPG +D VG+AKW AW L G+ EA + Y+ +V +CP W G+ G V D+ +++++ K+++ A + G +VSTM + Q + + ++F G ++ L+ G +V+ +DE+G+T LHFAAD G +
Sbjct: 4 FKNAANY-IRNPPTSLSSEQQLRLYALYKQATVGKCDAPKPGFLDFVGKAKWSAWKELEGMTQEEAEEEYVKEVDSICPQWR--------GNTGQVEPNRDVHEEIEFLLERKDDNRTNATMKLGPSVSTMRS-QCEDEDVANDLDVFDLYGRGRKDELTLLLKDGSRVNQKDEDGQTLLHFAADAGDA 182
BLAST of mRNA_Ecto-sp13_S_contig1894.5997.1 vs. uniprot
Match: A0A058ZYY6_EUCGR (ACB domain-containing protein n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A058ZYY6_EUCGR) HSP 1 Score: 109 bits (273), Expect = 4.050e-23 Identity = 64/175 (36.57%), Postives = 90/175 (51.43%), Query Frame = 1
Query: 97 LSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGVEPVEAMKSYLLKVTELCPDWLAEAQGQPPGDAGTVTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMAAGQGNTAEWGANEEIFAAASDGDVVQIRDLVSSGVKVDAQDEEGRTPLHFAADRGQSSV 621
+SSD +L+LY L+K ATEG C P+P + + RAKW AWN+L + P EAM+ Y+ VTEL P W+A + + G G + K + G ST + T + I A A +G++ + V +GV V+ +D EGRTPLH+A DRG S V
Sbjct: 145 VSSDAQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWNKLGAMPPEEAMQKYIDIVTELYPTWIAGSSMKSKGSHGDAPSTEAKGPM------------------GPVFSTFVHEEPGTES--KLDAIHAFAREGEIDNLLKCVEAGVSVNVKDSEGRTPLHWAVDRGHSKV 299
BLAST of mRNA_Ecto-sp13_S_contig1894.5997.1 vs. uniprot
Match: A0A1Q3D9C9_CEPFO (ACBP domain-containing protein/Ank_2 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3D9C9_CEPFO) HSP 1 Score: 107 bits (266), Expect = 2.690e-22 Identity = 60/175 (34.29%), Postives = 93/175 (53.14%), Query Frame = 1
Query: 97 LSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGVEPVEAMKSYLLKVTELCPDWLAEAQGQPPGDAGTVTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMAAGQGNTAEWGANEEIFAAASDGDVVQIRDLVSSGVKVDAQDEEGRTPLHFAADRGQSSV 621
+S+D +L+LY L+K ATEG C P+P + + RAKW AW +L + P +AM+SY+ VTEL P WLA + G+ G G + K+ + G S+ + + E + I A A +G+V + + SG+ V+ +D EG+TPLH+A DRG ++
Sbjct: 122 VSNDVQLQLYGLYKIATEGPCSTPQPSALKMAARAKWQAWQKLGAMPPEDAMQSYIDIVTELYPSWLAGSAGKSKGGDGDALSAEGKRSM------------------GPVFSSFVYEEESGTEL-KMDAIHAFAREGEVDNLLKCIDSGISVNLRDSEGQTPLHWAVDRGHFNI 277
BLAST of mRNA_Ecto-sp13_S_contig1894.5997.1 vs. uniprot
Match: A0A6J1I6A7_CUCMA (acyl-CoA-binding domain-containing protein 1-like n=4 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1I6A7_CUCMA) HSP 1 Score: 106 bits (264), Expect = 6.270e-22 Identity = 64/176 (36.36%), Postives = 91/176 (51.70%), Query Frame = 1
Query: 97 LSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGVEPVEAMKSYLLKVTELCPDWLAEAQGQPPGDAGTVTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMAAGQ-GNTAEWGANEEIFAAASDGDVVQIRDLVSSGVKVDAQDEEGRTPLHFAADRGQSSV 621
+S++ +L+LY +K ATEG C P+P + + RAKW AW +L + P EAM+ Y+ VTEL P W+A A G+ +D + + G ST + GN E E I A A +G++ + V SGV V+ +D EGRTPLH+A DRG S+V
Sbjct: 141 VSNEVQLQLYGYYKIATEGPCSTPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDLVTELYPSWVAGASGKSKDGNADAKSKDSRGPM------------------GPVFSTFVYEETGNDLEL---EAIHAFAREGELENLLKSVESGVSVNIKDSEGRTPLHWAVDRGHSNV 295
BLAST of mRNA_Ecto-sp13_S_contig1894.5997.1 vs. uniprot
Match: A0A6A1V1D0_9ROSI (Acyl-CoA-binding domain-containing protein 2 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1V1D0_9ROSI) HSP 1 Score: 105 bits (262), Expect = 9.660e-22 Identity = 65/175 (37.14%), Postives = 92/175 (52.57%), Query Frame = 1
Query: 97 LSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGVEPVEAMKSYLLKVTELCPDWLAEAQGQPPGDAGTVTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMAAGQGNTAEWGANEEIFAAASDGDVVQIRDLVSSGVKVDAQDEEGRTPLHFAADRGQSSV 621
+SSD +L+LY L+K ATEG C P+P + + RAKW AW +L + P EAM+ Y+ VTEL P WLA + + G G D + + G F V AG N ++ A I A A +G++ + + SGV V+ +D EGRTPLH+A DRG ++
Sbjct: 123 VSSDVQLKLYGLYKIATEGPCSTPQPSPLKMTSRAKWQAWQKLGAMPPEEAMQKYIDIVTELYPSWLAGSTLKSRGGEGDALSADTRGPM--------------GPVFSTFVYEEEAG--NESKMDA---IHAFAREGELDNLLKCIESGVSVNTRDSEGRTPLHWAVDRGHLNI 278
BLAST of mRNA_Ecto-sp13_S_contig1894.5997.1 vs. uniprot
Match: A0A1W0A4R9_9STRA (Acyl-CoA-binding domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4R9_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.000e-21 Identity = 68/196 (34.69%), Postives = 98/196 (50.00%), Query Frame = 1
Query: 37 DTERLFGMAANHMITVKGVALSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGVEPVEAMKSYLLKVTELCPDWLAEAQGQPPGDAGTVTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMAAGQGNTAEWGANEEIFAAASDGDVVQIRDLVSS-GVKVDAQDEEGRTPLHFAADRGQSSV 621
D ++ F AA LS++ +L LY+ +KQAT GDC KP ID V +AKW AW ++G+ EA K YL V+ +CP++ + GT SD+E +++G G S + + T EW E F AS G+V +I ++ + +D QDEEGRT LH+A DRGQ+
Sbjct: 43 DLDKHFEHAA--AFVASAARLSTENKLVLYAFYKQATTGDCTLTKPSAIDFVAKAKWDAWMGIQGMSREEAQKRYLEIVSSVCPNYQYGCEIVEQNADGT--------------SDEESEDDGGNFTIGSHTSQVIVDK-TTEEWQVVENEFHFASTGNVHEIMHMLDAHDTDIDKQDEEGRTMLHWAVDRGQTDT 221
BLAST of mRNA_Ecto-sp13_S_contig1894.5997.1 vs. uniprot
Match: A0A8B8JIJ5_ABRPR (acyl-CoA-binding domain-containing protein 1 isoform X2 n=2 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8JIJ5_ABRPR) HSP 1 Score: 105 bits (261), Expect = 1.380e-21 Identity = 64/178 (35.96%), Postives = 95/178 (53.37%), Query Frame = 1
Query: 97 LSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGVEPVEAMKSYLLKVTELCPDWLAEAQGQPPGDAGTVTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMAAGQGNTAEWGAN---EEIFAAASDGDVVQIRDLVSSGVKVDAQDEEGRTPLHFAADRGQSSV 621
+SSD +L+LY L+K ATEG C P+P + + RAKW AW +L + P +AM+ Y+ VTEL P WL D ++ +++ EG + GA G ST + E+G++ E I A +GD+ + + +GV V+ +D EGRTPLH+A DRG +V
Sbjct: 121 VSSDVQLQLYGLYKIATEGPCSTPQPSPLKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPTWL---------DGSSLVMFLQQRNKSGEGGGPSSEARGA---MGPVFSTFVYEE----EYGSDSQMEAIHGFAREGDMANLLKCIENGVSVNLKDSEGRTPLHWAVDRGHLNV 282
BLAST of mRNA_Ecto-sp13_S_contig1894.5997.1 vs. uniprot
Match: A0A8B8QPN5_9MYRT (acyl-CoA-binding domain-containing protein 1-like n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8QPN5_9MYRT) HSP 1 Score: 105 bits (261), Expect = 1.570e-21 Identity = 59/175 (33.71%), Postives = 89/175 (50.86%), Query Frame = 1
Query: 97 LSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGVEPVEAMKSYLLKVTELCPDWLAEAQGQPPGDAGTVTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMAAGQGNTAEWGANEEIFAAASDGDVVQIRDLVSSGVKVDAQDEEGRTPLHFAADRGQSSV 621
+++D +L+LY L+K ATEG C P+P + + RAKW AWN+L + P EAM+ Y+ VTEL P W+A + + G G + K + G F V + + + I A A +G++ + + GV V+ +D EGRTPLH+A DRG + V
Sbjct: 136 VANDVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWNKLGAMPPEEAMQKYIDIVTELYPSWIAGSSMKSKGSHGDAPSAETKGPM--------------GPVFSTFVHEESGSESKL------DAIHAFAREGEIDNLLKCIEGGVSVNVKDSEGRTPLHWAVDRGHAKV 290
BLAST of mRNA_Ecto-sp13_S_contig1894.5997.1 vs. uniprot
Match: A0A067KLG7_JATCU (ACB domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067KLG7_JATCU) HSP 1 Score: 105 bits (261), Expect = 1.630e-21 Identity = 64/176 (36.36%), Postives = 93/176 (52.84%), Query Frame = 1
Query: 97 LSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGVEPVEAMKSYLLKVTELCPDWLA-EAQGQPPGDAGTVTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMAAGQGNTAEWGANEEIFAAASDGDVVQIRDLVSSGVKVDAQDEEGRTPLHFAADRGQSSV 621
+S+D +L+LY+L+K ATEG C P P + + RAKW AW +L + P +AM+ Y+ VTEL P W + A + GD G D+K A +G + GN ++ E+I A A +GDV + + + SG V+ +D EGRTPLH+A DRG +V
Sbjct: 138 VSTDVQLQLYALYKIATEGPCSTPPPSALKMSARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPSWASGSAMKRKDGD-GDARSSDVK----------------ASMGPVFSTFVFEEESGNESKL---EDIHAFAREGDVKNLLNCIESGASVNLKDSEGRTPLHWAVDRGHLNV 293 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1894.5997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1894.5997.1 >prot_Ecto-sp13_S_contig1894.5997.1 ID=prot_Ecto-sp13_S_contig1894.5997.1|Name=mRNA_Ecto-sp13_S_contig1894.5997.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=282bp MAAMEPPSVCDEDTERLFGMAANHMITVKGVALSSDQRLELYSLFKQATEback to top mRNA from alignment at Ecto-sp13_S_contig1894:9365..12722- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1894.5997.1 ID=mRNA_Ecto-sp13_S_contig1894.5997.1|Name=mRNA_Ecto-sp13_S_contig1894.5997.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3358bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1894:9365..12722- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1894:9365..12722- >mRNA_Ecto-sp13_S_contig1894.5997.1 ID=mRNA_Ecto-sp13_S_contig1894.5997.1|Name=mRNA_Ecto-sp13_S_contig1894.5997.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=846bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1894:9365..12722- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |