mRNA_Ecto-sp13_S_contig1892.5987.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: D8LIJ3_ECTSI (DUF4149 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ3_ECTSI) HSP 1 Score: 369 bits (946), Expect = 2.710e-125 Identity = 196/207 (94.69%), Postives = 199/207 (96.14%), Query Frame = 1
Query: 1 MGVLDLMLPWITRAAVLVSVVLLTLTTLRRHSDIPLSHATLRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPFLVAVACVVANLVFFGPQTTITMMERRRVCKELGVDRTSPDPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERLRL 621
MGVLDLMLPWITRAA+LVSVVLLTLTTLRRHSDIPLS ATLRVAHLCSFSVWFGTSVWVSFIAGIVL+RAVT+E FGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSS SARSDGDDGSTVGATPFLVAVACVVANLVFF PQTTITMMER RVCKELGVDR SPDPQVRKLSKRFGMFHGI NLINLVALACGAVHLCALAERL L
Sbjct: 1 MGVLDLMLPWITRAAILVSVVLLTLTTLRRHSDIPLSQATLRVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSARSDGDDGSTVGATPFLVAVACVVANLVFFSPQTTITMMERSRVCKELGVDRKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALAERLSL 207
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A1E7FD76_9STRA (DUF4149 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD76_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.350e-26 Identity = 78/185 (42.16%), Postives = 102/185 (55.14%), Query Frame = 1
Query: 103 PLSHATLRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVA-GFTGAALSSSPSARSDGDDGSTVGATPFLVAVACVVANLVFFGPQTTITMMERRRVCKELGVDR-------TSP----DPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERLRL 621
P SH+ L + HL +FS WFG SVWVSF AGIV+ + + FG Q+KLF AYF FS + +A G +G LSS+ + +V +AC++ NL +F P TT M +R V K LG T P DPQ++ LSK FGM HG++ L+NL AL G V L AER+ L
Sbjct: 42 PNSHS-LMLIHLLAFSSWFGCSVWVSFPAGIVMFKTLPRHTFGRLQSKLFPAYFLFSAGAIIIAIGTSGDLLSSTSNXXXXXXXXXXXIPYSLIVILACILINLFYFEPATTRVMYQRHAVEKRLGTGHEIGQLRPTDPKKANDPQLKALSKTFGMLHGVSTLLNLAALGFGCVWLSKCAERMVL 225
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A7S4ATM5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATM5_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.930e-25 Identity = 72/182 (39.56%), Postives = 103/182 (56.59%), Query Frame = 1
Query: 109 SHATLRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPF-LVAV-ACVVANLVFFGPQTTITMMERRRVCKELGVD-----------RTSPDPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERL 615
SH + + HL +FS WFG SVWVSFIAGIV+ + + FG Q+KLF AYF FS + VA T +AL+ S ++ S+ P+ L+A+ AC + NL++F P TT M +R V K LG + + DPQ++ LSK FGM HG++ L+NL +L G A+++
Sbjct: 42 SHHGIVLLHLLAFSSWFGCSVWVSFIAGIVMFKTLPRHVFGRLQSKLFPAYFVFSAGAIVVAIATSSALTKSR------EEASSTNNIPYSLIAILACTLLNLLYFEPATTKVMFQRHAVEKRLGTGHEIGKIRPDDPKKANDPQLKALSKTFGMLHGVSTLLNLGSLGFGCAWFSKCADQM 217
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A7S4MCN5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCN5_9STRA) HSP 1 Score: 107 bits (268), Expect = 7.920e-24 Identity = 78/195 (40.00%), Postives = 107/195 (54.87%), Query Frame = 1
Query: 43 AVLVSVVLLTLTTLRRHSDIPLSHATLRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPFLVAVACVVANLVFFGPQTTITMMERRRVCKELG----VDRTSPD-------PQVRKLSKRFGMFHGITNLINLVALACGAVHL 594
AVL + L T T+L S++ L + HL +FS WFG SVWVSF++G+V+ R + FG Q++LF AYF++S + +AVA T AL + LV +A V+ NL+F P+TT M +R V K LG V + PD P++R LSK+FGM HGI++L NL AL G V L
Sbjct: 23 AVLAACALGTRTSLE--SEVGHHRHYLVLVHLLAFSSWFGCSVWVSFVSGLVMFRNLPRHVFGRLQSRLFPAYFQYSAVTVAVAILTAGALGWRTNV--------------LLVVMATVLLNLLFLEPETTRIMYKRHAVEKRLGTGHEVGQLKPDDPVKANDPELRALSKKFGMLHGISSLTNLAALGFGCVWL 201
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A7R9VXI6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXI6_9STRA) HSP 1 Score: 106 bits (264), Expect = 3.220e-23 Identity = 74/178 (41.57%), Postives = 101/178 (56.74%), Query Frame = 1
Query: 121 LRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPF-LVAV-ACVVANLVFFGPQTTITMMERRRVCKELG----VDRTSPD-------PQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERL 615
L + HL +FS WFG SVWVSF+AG+V+ R + FG Q++LF YF+FS L +AVA F+ A VG + LVAV V+ NL+F P+TT M +R V K LG V + PD P++R LSK+FGM HG+++L+NL AL G V L A+++
Sbjct: 51 LLLVHLLAFSSWFGCSVWVSFVAGLVMFRNLPRHVFGRLQSRLFPVYFRFSALNVAVAIFSAGA----------------VGWNAYGLVAVMGTVLLNLLFLEPETTRIMFKRHTVEKRLGTGHEVGQLKPDDLEKANDPELRALSKKFGMLHGMSSLMNLAALGFGCVWLNFCAKQM 212
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A7S1BIS9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIS9_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 3.200e-19 Identity = 71/197 (36.04%), Postives = 105/197 (53.30%), Query Frame = 1
Query: 61 VLLTLTTLRRHSDIPLSHATLRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPFLVAV-ACVVANLVFFGPQTTITMMERRRVCKELG----VDRTSP-------DPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERL 615
+L+ T+L SD P S L + HL + + WFG SVWVS +AG+V RA+ FG A+LF YF FS + +++A + +AR G +L A+ V ANL++ P+TT M R V + LG V + P DP++R L+K+FGM HGI+ L+NL+A+ G V LA+++
Sbjct: 38 ILILATSLAPPSD-PRSRKALLLLHLLACASWFGCSVWVSCVAGLVTFRALPRHVFGRLMARLFPVYFNFSAVTVSLA---------AAAARGLGWP------IAWLAAILGTVAANLLYLEPETTRVMFLRHVVERRLGTGHEVGQLKPSDPAKANDPELRALTKKFGMLHGISTLLNLMAMGFGCVWFSILAQKI 218
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A0G4ETH3_VITBC (DUF4149 domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ETH3_VITBC) HSP 1 Score: 90.5 bits (223), Expect = 1.510e-17 Identity = 57/156 (36.54%), Postives = 90/156 (57.69%), Query Frame = 1
Query: 142 SFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPFLVAVACVVANLVFFGPQTTITMMERRRVCKELG-----------VDRTSPDPQVRKLSKRFGMFHGITNLINLVALA 576
S+ + FG+ VWVS ++GI++ R V FG Q+KLF AYF+ S +C ++ A L PS R + T +++A + NLV+ PQTT TM ER + +ELG V++ + ++++L+K+FGM+HGI++L NL+ LA
Sbjct: 42 SWGILFGSQVWVSLVSGIIMFRTVPRHTFGKLQSKLFPAYFQLSTICSSLLTIATAVLM--PSNR--------LLHTCAGLSLASSLVNLVYLEPQTTATMYERHAIERELGIGVSMKDDPASVEKAKANTELQRLNKKFGMYHGISSLSNLIGLA 187
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A0G4GGW2_9ALVE (DUF4149 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GGW2_9ALVE) HSP 1 Score: 91.3 bits (225), Expect = 2.670e-17 Identity = 65/181 (35.91%), Postives = 93/181 (51.38%), Query Frame = 1
Query: 133 HLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAV--------AGFTGAALSSSPSARSDGDDGSTVGATPFLVAV-ACVVANLVFFGPQTTITMMERRRVCKELG----VDRTSP-------DPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERL 615
HL F+ WFG SVWVSF+AG+V+ ++ FG QAKLF YF+FS+LC++V A F G++ + + L+AV ++ NL++F P TT M R V + LG V + P DP++ LS RFG HG + +NL+ L G H+C + RL
Sbjct: 99 HLFFFASWFGCSVWVSFVAGLVMFYSLPRHVFGQLQAKLFPRYFQFSVLCISVCLALEVCAAKFRGSSKCMPREQQMN------------LIAVWGILLLNLLYFEPVTTKVMFLRHAVERRLGTGHEVGQLRPWDPVKAKDPELVSLSARFGKLHGCSTSLNLLGLGLGCWHICWIGARL 267
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A8J1W0M4_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1W0M4_9DINO) HSP 1 Score: 87.4 bits (215), Expect = 5.020e-16 Identity = 62/174 (35.63%), Postives = 92/174 (52.87%), Query Frame = 1
Query: 133 HLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFT----GAALSSSPSARSDGDDGSTVGATP------FLVAVACVVANLVFFGPQTTITMMERRRVCKELG----VDRTSP-------DPQVRKLSKRFGMFHGITNLINLVALACGAVH 591
H+ F+ WFG S+WVSF+AG+V+ + FG QAKLF YF+FS++ ++ A G+ L + A+ TV A P + ++ NL++F P+TT M ER +V +LG + + P DP++ LSKRFG HGI+ +NL+AL G H
Sbjct: 80 HVFCFASWFGCSMWVSFVAGLVMFNNLPRHVFGRLQAKLFPRYFQFSVIFVSCALLPHLVPGSVLERTALAK-------TV-ALPQNQQFNLAAIIGILLLNLLYFEPRTTAVMFERHKVEVKLGTGHEIGQLKPSDPAKANDPELVALSKRFGKLHGISTSLNLIALCLGVWH 245
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A8J4RRE6_9ROSI (DUF4149 domain-containing protein n=4 Tax=Fagaceae TaxID=3503 RepID=A0A8J4RRE6_9ROSI) HSP 1 Score: 86.3 bits (212), Expect = 5.910e-16 Identity = 61/177 (34.46%), Postives = 98/177 (55.37%), Query Frame = 1
Query: 121 LRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPFLVAVACVVANLVFFGPQTTITMMERRRVCK------ELG----VDRTSPDPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERLRL 621
L++AHL +S FGT++WV+FIAGI++ + + FG Q+K+F AYF +C AV+ G+ P S D +G L A A +ANL+ F P T M +R V + E+G V+ +P+++ ++K+FGM HG+++L N+++ A+H LA +L L
Sbjct: 42 LKLAHLLCYSTAFGTALWVTFIAGIIMFKNLPRHQFGSLQSKMFPAYFSMVGICCAVS--VGSFAYLHPWKSSSTADKYQLGF--LLSAFAFNLANLLVFSPMTIEMMKQRHEVERGSNIGDEVGWSKNVEVAKVNPKLKAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKLNL 214 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1892.5987.1 >prot_Ecto-sp13_S_contig1892.5987.1 ID=prot_Ecto-sp13_S_contig1892.5987.1|Name=mRNA_Ecto-sp13_S_contig1892.5987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp MGVLDLMLPWITRAAVLVSVVLLTLTTLRRHSDIPLSHATLRVAHLCSFSback to top mRNA from alignment at Ecto-sp13_S_contig1892:5614..8077+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1892.5987.1 ID=mRNA_Ecto-sp13_S_contig1892.5987.1|Name=mRNA_Ecto-sp13_S_contig1892.5987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2464bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1892:5614..8077+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1892:5614..8077+ >mRNA_Ecto-sp13_S_contig1892.5987.1 ID=mRNA_Ecto-sp13_S_contig1892.5987.1|Name=mRNA_Ecto-sp13_S_contig1892.5987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=624bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1892:5614..8077+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |