prot_Ecto-sp13_S_contig1892.5987.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1892.5987.1
Unique Nameprot_Ecto-sp13_S_contig1892.5987.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length208
Homology
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: D8LIJ3_ECTSI (DUF4149 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ3_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 6.890e-128
Identity = 196/207 (94.69%), Postives = 199/207 (96.14%), Query Frame = 0
Query:    1 MGVLDLMLPWITRAAVLVSVVLLTLTTLRRHSDIPLSHATLRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPFLVAVACVVANLVFFGPQTTITMMERRRVCKELGVDRTSPDPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERLRL 207
            MGVLDLMLPWITRAA+LVSVVLLTLTTLRRHSDIPLS ATLRVAHLCSFSVWFGTSVWVSFIAGIVL+RAVT+E FGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSS SARSDGDDGSTVGATPFLVAVACVVANLVFF PQTTITMMER RVCKELGVDR SPDPQVRKLSKRFGMFHGI NLINLVALACGAVHLCALAERL L
Sbjct:    1 MGVLDLMLPWITRAAILVSVVLLTLTTLRRHSDIPLSQATLRVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSARSDGDDGSTVGATPFLVAVACVVANLVFFSPQTTITMMERSRVCKELGVDRKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALAERLSL 207          
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A1E7FD76_9STRA (DUF4149 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD76_9STRA)

HSP 1 Score: 114 bits (284), Expect = 9.160e-28
Identity = 77/183 (42.08%), Postives = 101/183 (55.19%), Query Frame = 0
Query:   35 PLSHATLRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVA-GFTGAALSSSPSARSDGDDGSTVGATPFLVAVACVVANLVFFGPQTTITMMERRRVCKELGVDR-------TSP----DPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERL 205
            P SH+ L + HL +FS WFG SVWVSF AGIV+ + +    FG  Q+KLF AYF FS   + +A G +G  LSS+ +                +V +AC++ NL +F P TT  M +R  V K LG          T P    DPQ++ LSK FGM HG++ L+NL AL  G V L   AER+
Sbjct:   42 PNSHS-LMLIHLLAFSSWFGCSVWVSFPAGIVMFKTLPRHTFGRLQSKLFPAYFLFSAGAIIIAIGTSGDLLSSTSNXXXXXXXXXXXIPYSLIVILACILINLFYFEPATTRVMYQRHAVEKRLGTGHEIGQLRPTDPKKANDPQLKALSKTFGMLHGVSTLLNLAALGFGCVWLSKCAERM 223          
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A7S4ATM5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATM5_9STRA)

HSP 1 Score: 111 bits (278), Expect = 5.870e-27
Identity = 72/182 (39.56%), Postives = 103/182 (56.59%), Query Frame = 0
Query:   37 SHATLRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPF-LVAV-ACVVANLVFFGPQTTITMMERRRVCKELGVD-----------RTSPDPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERL 205
            SH  + + HL +FS WFG SVWVSFIAGIV+ + +    FG  Q+KLF AYF FS   + VA  T +AL+ S       ++ S+    P+ L+A+ AC + NL++F P TT  M +R  V K LG             + + DPQ++ LSK FGM HG++ L+NL +L  G       A+++
Sbjct:   42 SHHGIVLLHLLAFSSWFGCSVWVSFIAGIVMFKTLPRHVFGRLQSKLFPAYFVFSAGAIVVAIATSSALTKSR------EEASSTNNIPYSLIAILACTLLNLLYFEPATTKVMFQRHAVEKRLGTGHEIGKIRPDDPKKANDPQLKALSKTFGMLHGVSTLLNLGSLGFGCAWFSKCADQM 217          
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A7S4MCN5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCN5_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.850e-25
Identity = 78/195 (40.00%), Postives = 107/195 (54.87%), Query Frame = 0
Query:   15 AVLVSVVLLTLTTLRRHSDIPLSHATLRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPFLVAVACVVANLVFFGPQTTITMMERRRVCKELG----VDRTSPD-------PQVRKLSKRFGMFHGITNLINLVALACGAVHL 198
            AVL +  L T T+L   S++      L + HL +FS WFG SVWVSF++G+V+ R +    FG  Q++LF AYF++S + +AVA  T  AL    +                LV +A V+ NL+F  P+TT  M +R  V K LG    V +  PD       P++R LSK+FGM HGI++L NL AL  G V L
Sbjct:   23 AVLAACALGTRTSLE--SEVGHHRHYLVLVHLLAFSSWFGCSVWVSFVSGLVMFRNLPRHVFGRLQSRLFPAYFQYSAVTVAVAILTAGALGWRTNV--------------LLVVMATVLLNLLFLEPETTRIMYKRHAVEKRLGTGHEVGQLKPDDPVKANDPELRALSKKFGMLHGISSLTNLAALGFGCVWL 201          
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A7R9VXI6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXI6_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.230e-24
Identity = 74/178 (41.57%), Postives = 101/178 (56.74%), Query Frame = 0
Query:   41 LRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPF-LVAV-ACVVANLVFFGPQTTITMMERRRVCKELG----VDRTSPD-------PQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERL 205
            L + HL +FS WFG SVWVSF+AG+V+ R +    FG  Q++LF  YF+FS L +AVA F+  A                VG   + LVAV   V+ NL+F  P+TT  M +R  V K LG    V +  PD       P++R LSK+FGM HG+++L+NL AL  G V L   A+++
Sbjct:   51 LLLVHLLAFSSWFGCSVWVSFVAGLVMFRNLPRHVFGRLQSRLFPVYFRFSALNVAVAIFSAGA----------------VGWNAYGLVAVMGTVLLNLLFLEPETTRIMFKRHTVEKRLGTGHEVGQLKPDDLEKANDPELRALSKKFGMLHGMSSLMNLAALGFGCVWLNFCAKQM 212          
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A7S1BIS9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIS9_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.890e-20
Identity = 71/197 (36.04%), Postives = 105/197 (53.30%), Query Frame = 0
Query:   21 VLLTLTTLRRHSDIPLSHATLRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPFLVAV-ACVVANLVFFGPQTTITMMERRRVCKELG----VDRTSP-------DPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERL 205
            +L+  T+L   SD P S   L + HL + + WFG SVWVS +AG+V  RA+    FG   A+LF  YF FS + +++A         + +AR  G          +L A+   V ANL++  P+TT  M  R  V + LG    V +  P       DP++R L+K+FGM HGI+ L+NL+A+  G V    LA+++
Sbjct:   38 ILILATSLAPPSD-PRSRKALLLLHLLACASWFGCSVWVSCVAGLVTFRALPRHVFGRLMARLFPVYFNFSAVTVSLA---------AAAARGLGWP------IAWLAAILGTVAANLLYLEPETTRVMFLRHVVERRLGTGHEVGQLKPSDPAKANDPELRALTKKFGMLHGISTLLNLMAMGFGCVWFSILAQKI 218          
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A0G4ETH3_VITBC (DUF4149 domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ETH3_VITBC)

HSP 1 Score: 90.1 bits (222), Expect = 8.040e-19
Identity = 57/156 (36.54%), Postives = 90/156 (57.69%), Query Frame = 0
Query:   48 SFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPFLVAVACVVANLVFFGPQTTITMMERRRVCKELG-----------VDRTSPDPQVRKLSKRFGMFHGITNLINLVALA 192
            S+ + FG+ VWVS ++GI++ R V    FG  Q+KLF AYF+ S +C ++     A L   PS R        +  T   +++A  + NLV+  PQTT TM ER  + +ELG           V++   + ++++L+K+FGM+HGI++L NL+ LA
Sbjct:   42 SWGILFGSQVWVSLVSGIIMFRTVPRHTFGKLQSKLFPAYFQLSTICSSLLTIATAVLM--PSNR--------LLHTCAGLSLASSLVNLVYLEPQTTATMYERHAIERELGIGVSMKDDPASVEKAKANTELQRLNKKFGMYHGISSLSNLIGLA 187          
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A0G4GGW2_9ALVE (DUF4149 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GGW2_9ALVE)

HSP 1 Score: 90.5 bits (223), Expect = 1.860e-18
Identity = 65/181 (35.91%), Postives = 93/181 (51.38%), Query Frame = 0
Query:   45 HLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAV--------AGFTGAALSSSPSARSDGDDGSTVGATPFLVAV-ACVVANLVFFGPQTTITMMERRRVCKELG----VDRTSP-------DPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERL 205
            HL  F+ WFG SVWVSF+AG+V+  ++    FG  QAKLF  YF+FS+LC++V        A F G++       + +            L+AV   ++ NL++F P TT  M  R  V + LG    V +  P       DP++  LS RFG  HG +  +NL+ L  G  H+C +  RL
Sbjct:   99 HLFFFASWFGCSVWVSFVAGLVMFYSLPRHVFGQLQAKLFPRYFQFSVLCISVCLALEVCAAKFRGSSKCMPREQQMN------------LIAVWGILLLNLLYFEPVTTKVMFLRHAVERRLGTGHEVGQLRPWDPVKAKDPELVSLSARFGKLHGCSTSLNLLGLGLGCWHICWIGARL 267          
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A8J1W0M4_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1W0M4_9DINO)

HSP 1 Score: 86.7 bits (213), Expect = 4.210e-17
Identity = 62/174 (35.63%), Postives = 92/174 (52.87%), Query Frame = 0
Query:   45 HLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFT----GAALSSSPSARSDGDDGSTVGATP------FLVAVACVVANLVFFGPQTTITMMERRRVCKELG----VDRTSP-------DPQVRKLSKRFGMFHGITNLINLVALACGAVH 197
            H+  F+ WFG S+WVSF+AG+V+   +    FG  QAKLF  YF+FS++ ++ A       G+ L  +  A+       TV A P          +  ++ NL++F P+TT  M ER +V  +LG    + +  P       DP++  LSKRFG  HGI+  +NL+AL  G  H
Sbjct:   80 HVFCFASWFGCSMWVSFVAGLVMFNNLPRHVFGRLQAKLFPRYFQFSVIFVSCALLPHLVPGSVLERTALAK-------TV-ALPQNQQFNLAAIIGILLLNLLYFEPRTTAVMFERHKVEVKLGTGHEIGQLKPSDPAKANDPELVALSKRFGKLHGISTSLNLIALCLGVWH 245          
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Match: A0A8J4RRE6_9ROSI (DUF4149 domain-containing protein n=4 Tax=Fagaceae TaxID=3503 RepID=A0A8J4RRE6_9ROSI)

HSP 1 Score: 85.1 bits (209), Expect = 7.520e-17
Identity = 61/177 (34.46%), Postives = 98/177 (55.37%), Query Frame = 0
Query:   41 LRVAHLCSFSVWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSPSARSDGDDGSTVGATPFLVAVACVVANLVFFGPQTTITMMERRRVCK------ELG----VDRTSPDPQVRKLSKRFGMFHGITNLINLVALACGAVHLCALAERLRL 207
            L++AHL  +S  FGT++WV+FIAGI++ + +    FG  Q+K+F AYF    +C AV+   G+     P   S   D   +G    L A A  +ANL+ F P T   M +R  V +      E+G    V+    +P+++ ++K+FGM HG+++L N+++    A+H   LA +L L
Sbjct:   42 LKLAHLLCYSTAFGTALWVTFIAGIIMFKNLPRHQFGSLQSKMFPAYFSMVGICCAVS--VGSFAYLHPWKSSSTADKYQLGF--LLSAFAFNLANLLVFSPMTIEMMKQRHEVERGSNIGDEVGWSKNVEVAKVNPKLKAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKLNL 214          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1892.5987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIJ3_ECTSI6.890e-12894.69DUF4149 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A1E7FD76_9STRA9.160e-2842.08DUF4149 domain-containing protein n=1 Tax=Fragilar... [more]
A0A7S4ATM5_9STRA5.870e-2739.56Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4MCN5_9STRA2.850e-2540.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9VXI6_9STRA1.230e-2441.57Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1BIS9_9STRA1.890e-2036.04Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A0G4ETH3_VITBC8.040e-1936.54DUF4149 domain-containing protein n=3 Tax=Vitrella... [more]
A0A0G4GGW2_9ALVE1.860e-1835.91DUF4149 domain-containing protein n=1 Tax=Chromera... [more]
A0A8J1W0M4_9DINO4.210e-1735.63Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
A0A8J4RRE6_9ROSI7.520e-1734.46DUF4149 domain-containing protein n=4 Tax=Fagaceae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025423Domain of unknown function DUF4149PFAMPF13664DUF4149coord: 48..152
e-value: 4.8E-19
score: 68.6
NoneNo IPR availablePANTHERPTHR23241LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATEDcoord: 10..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 203..207
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 72..85
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 176..198
NoneNo IPR availableTMHMMTMhelixcoord: 120..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1892contigEcto-sp13_S_contig1892:5614..7520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1892.5987.1mRNA_Ecto-sp13_S_contig1892.5987.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1892 5614..8077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1892.5987.1 ID=prot_Ecto-sp13_S_contig1892.5987.1|Name=mRNA_Ecto-sp13_S_contig1892.5987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp
MGVLDLMLPWITRAAVLVSVVLLTLTTLRRHSDIPLSHATLRVAHLCSFS
VWFGTSVWVSFIAGIVLIRAVTIEAFGLAQAKLFDAYFKFSLLCLAVAGF
TGAALSSSPSARSDGDDGSTVGATPFLVAVACVVANLVFFGPQTTITMME
RRRVCKELGVDRTSPDPQVRKLSKRFGMFHGITNLINLVALACGAVHLCA
LAERLRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025423DUF4149