prot_Ecto-sp13_S_contig10645.596.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10645.596.1
Unique Nameprot_Ecto-sp13_S_contig10645.596.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length128
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10645.596.1 vs. uniprot
Match: D8LJM5_ECTSI (Kinesin family member 3A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM5_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 4.200e-43
Identity = 100/127 (78.74%), Postives = 103/127 (81.10%), Query Frame = 0 
Query:    1 MVGGRLEERERAYRRKLRAAVAECRSSRVRKHGASSNNGVPFXXXXXXXHATPVSETASDVGARRGGDTSAIGPQGGGHRDGPRGAGGGSSHHGSPPREGQRTLSVTISSRQGARGDGGRVRSNSHA 127
            MVGGRLEERERAYRRKLRAAVAECRSSRVRKHG  SNN    XXXXXXX    VSETASDVGARRG DT  + PQGGG RDGPRGAG       SPP+EGQRTLSVTISSR GA+G GGRVRSNSHA
Sbjct: 2752 MVGGRLEERERAYRRKLRAAVAECRSSRVRKHGPPSNNXXXXXXXXXXXXXXXVSETASDVGARRGWDTGDLRPQGGGRRDGPRGAGXXXXXXXSPPQEGQRTLSVTISSRHGAKGGGGRVRSNSHA 2878
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BLAST of mRNA_Ecto-sp13_S_contig10645.596.1 vs. uniprot
Match: A0A6H5K0I5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I5_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 8.440e-27
Identity = 71/89 (79.78%), Postives = 72/89 (80.90%), Query Frame = 0 
Query:    1 MVGGRLEERERAYRRKLRAAVAECRSSRVRKHGASSNNGVPFXXXXXXXHATPVSETASDVGARRGGDTSAIGPQGGGHRDGPRGAGGG 89
            MV GRLEERERAYRRKLRAAVAECRS RVRKHGA SNN    XXXXXXX      ETASDVGARRG DT A+GPQGGG RDGP GAGGG
Sbjct: 2128 MVAGRLEERERAYRRKLRAAVAECRSLRVRKHGALSNNXXXXXXXXXXXXXXXXXETASDVGARRGRDTGALGPQGGGRRDGPHGAGGG 2216
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10645.596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJM5_ECTSI4.200e-4378.74Kinesin family member 3A n=1 Tax=Ectocarpus silicu... [more]
A0A6H5K0I5_9PHAE8.440e-2779.78Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10645contigEcto-sp13_S_contig10645:4969..5352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10645.596.1mRNA_Ecto-sp13_S_contig10645.596.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10645 3973..5745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10645.596.1 ID=prot_Ecto-sp13_S_contig10645.596.1|Name=mRNA_Ecto-sp13_S_contig10645.596.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp
MVGGRLEERERAYRRKLRAAVAECRSSRVRKHGASSNNGVPFNSGAPFKH
ATPVSETASDVGARRGGDTSAIGPQGGGHRDGPRGAGGGSSHHGSPPREG
QRTLSVTISSRQGARGDGGRVRSNSHA*
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