mRNA_Ecto-sp13_S_contig18885.5962.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18885.5962.1
Unique NamemRNA_Ecto-sp13_S_contig18885.5962.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: D8LQA2_ECTSI (Cationic amino acid transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQA2_ECTSI)

HSP 1 Score: 548 bits (1413), Expect = 6.370e-190
Identity = 319/346 (92.20%), Postives = 325/346 (93.93%), Query Frame = 1
Query:    1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAAT---------TAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVGQKSRTWPQLAAATAAAASNTSTGEESLLESPPNIPEFGSGKRMGGNHGRGARGKRERSQLRATFPGEPPLDAVSPARGGSTGRSSGDEGEGFAVGAQKEEGYMSFAALT 1011
            +F VQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIA FAPFAVLDDLVSAGVLLCFA+TNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAA          TA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPA+GTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVGQKSRTWPQLAAATAAAASNTSTGEESLLESPP+ PEFGSGKRMGGNH RGA GKRERSQLRATFPGEPPLD+VSPARGGSTGR SG+EGEG AVGAQKEEGYMSFAALT
Sbjct:  343 SFLVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIATFAPFAVLDDLVSAGVLLCFAITNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAAADRVSLSVAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPAVGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVGQKSRTWPQLAAATAAAASNTSTGEESLLESPPSTPEFGSGKRMGGNHDRGAGGKRERSQLRATFPGEPPLDSVSPARGGSTGRLSGEEGEGLAVGAQKEEGYMSFAALT 688          
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A7S4J7E7_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J7E7_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.510e-20
Identity = 75/232 (32.33%), Postives = 106/232 (45.69%), Query Frame = 1
Query:    1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLG----GPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVG 684
            T   QPRL + ++ DGLLP   A  DE G L   T  +G +MV IA F PF  LDDL+SAG+L+ F++T++  +++R  N D   P     L+ LF+ +     L +     +T                                  FL   LV   +   CP      G      + F  P  P++P +GT I+W L+ QL W  L   +  VG   ++YF+YGLKHSVG
Sbjct:  366 TIMAQPRLQYAMSIDGLLPPIFAQIDETGNLWFGTLISGILMVLIATFVPFVYLDDLISAGILVAFSMTDTSVVLLRHDNPDDN-PNLLEKLLGLFHTVSFVTSLALGHCIGSTVGS-----------------------ILTLSSCIFL---LVLTRMISKCPLKSSKCGVNSSDSDFFEAPLVPYLPLLGTFINWYLIAQLEWLGLTLLVAYVGISVVFYFSYGLKHSVG 570          
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A7S4IL23_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IL23_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.740e-19
Identity = 69/235 (29.36%), Postives = 113/235 (48.09%), Query Frame = 1
Query:    1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSIC-----CP--ELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVG 684
            +   QPRL + +A+DGL+P   A  D  G L   T  +G VM+ IA F PF  L+DL+SAG+L+ F +T+S  I++R ++ +   P     L+++FN L +  GLL+     +   +                               F A G+VAL + +      CP  +L + +G    F+ PF P++P +G+ ++W L+  L    +   +     V + Y+ YG+K SVG
Sbjct:  383 SIMAQPRLQYAMATDGLIPPIFAKMDANGNLWWGTLISGIVMILIATFVPFTFLNDLISAGILIAFTITDSSVILLRHASPEDK-PLLLEKLLVVFNILAIISGLLLSNYMDSDAGQ------------------------------VFAAFGVVALIILMVEIKRQCPPLDLSNVMGSSAGFKTPFMPFLPLLGSVVNWYLIAHLDSYDIVLLIVYCAVVMVGYYLYGIKRSVG 586          
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A7S1Z7M8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z7M8_TRICV)

HSP 1 Score: 94.4 bits (233), Expect = 1.330e-17
Identity = 74/245 (30.20%), Postives = 109/245 (44.49%), Query Frame = 1
Query:    1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPC--RPLVLLFNAL-CLAG------------GLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLG--GPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVG 684
            +   QPRL F +A+DGLLP      D  G L   T  +G VM+ IA   PF  L+DL+SAG+L+ F +T++  I++R ++ +     PC    L+ +FN L C++G             LL  V+CAA  A G                                      + +   CP L       G  +F+ P  P++P  GT ++W L+  L    L   +  +G   L+YF YG+KHSVG
Sbjct:  385 SIMAQPRLQFAMATDGLLPSIFGRLDSNGNLWWGTLISGIVMIIIATCVPFTFLNDLISAGILVAFTITDASVIILRHASPEN---SPCLLEKLLGVFNILSCISGLFLTKCLDTDIGKLLAGVSCAALLAVG--------------------------------------VEIKRRCPPLEGEAAVVGDASFKTPLMPYLPLAGTVVNWYLIAHLDAYDLILLVLYLGVALLFYFCYGVKHSVG 588          
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A6G0WND0_9STRA (AA_permease_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WND0_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.820e-16
Identity = 70/230 (30.43%), Postives = 103/230 (44.78%), Query Frame = 1
Query:    4 FQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGL-VALALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASL-RWTLWAVGAVSLWYFTYGLKHSVGQ 687
            F  QPRLL+ ++ DGLLP+  +  D  G L   T  +G  +  +A+F PFA L ++VS G+L+ F +TNS  IV+R     P                    G +V ++CAA     +S                            FLAA   VA  +   CPE     G P  FR P  P+VP +   ++W L+ QL+   + R  +W   A+ + YF YG ++S G+
Sbjct:  327 FLAQPRLLYAMSVDGLLPQVFSQVDSNGNLFWGTLLSGTALALVALFEPFATLWNMVSFGILVSFIMTNSALIVVRTRESSP-------------QKSYSLTGTIVALSCAAMFVFQKSYVDRDSAAGLVISMV-------------FLAATFGVAAVIFFTCPENQ---GEPNMFRAPLVPFVPMLAIVVNWYLIPQLNEKDIARGCIWIAAAI-VSYFLYGFRNSAGR 526          
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: W4GW16_9STRA (AA_permease_C domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GW16_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 8.250e-16
Identity = 66/235 (28.09%), Postives = 104/235 (44.26%), Query Frame = 1
Query:    4 FQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVAL------ALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASL-RWTLWAVGAVSLWYFTYGLKHSVGQ 687
            F  QPRL++ L+ DGL+P+     D +G L   T  AGG  V +A   PF  + ++VS G+L+ F +TNS  ++IR     P        L     A  +A      +       +GRS                             ++ GL+A+      AL + CP+    +GG + FR P  P++P +   ++W L+ QL+   + R  +W +G   + YF YG  HS G+
Sbjct:  346 FLAQPRLMYALSVDGLIPEIFGRVDSKGNLFWCTVIAGGFFVVVAFVIPFGAIWNIVSFGILVSFIMTNSSLLLIRTRESSP-------GLAYKLTAAAVAASCAAMMTFQKGFVDGRSHVALG------------------------VSMGLLAVTFALGTALYVKCPQN---IGGADMFRAPLVPFIPLLSITVNWFLVAQLAEKDIARGCIW-IGCAIIAYFLYGFSHSEGR 545          
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A7S1CXR0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXR0_CYCTE)

HSP 1 Score: 86.7 bits (213), Expect = 3.130e-15
Identity = 68/222 (30.63%), Postives = 94/222 (42.34%), Query Frame = 1
Query:   13 QPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELP--------HPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWY 654
            QPRLL  +A DGLLP+ L   D  G L      +G  M  IA   PF  L+DL+SAG+L+ F++TNSC +++R  +  P  P     L++L+NALC A GL +      +T    S                             L   L    L   CP              G    +  P  PW P +G  ++W L+ QLSW  L   +  +   +LWY
Sbjct:  195 QPRLLQAMALDGLLPEFLGRVDNNGNLRMGALISGVGMTIIASCVPFRYLNDLISAGILVAFSMTNSCLVLLRCES-PPNKPHLLERLLVLYNALCFATGLSLTRNKVLSTVSVVSV----------------------------LLTMLTFHQLWRSCPRTTVFGGSIFRMEDGAVSYYETPLVPWTPCLGMFVNWYLVAQLSWFGLFLLIGYLSLATLWY 387          
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A7S2IG81_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IG81_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 5.620e-15
Identity = 66/235 (28.09%), Postives = 97/235 (41.28%), Query Frame = 1
Query:    1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLD-------PIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVG 684
            T   QPRL + ++ DGLLP   A  D  G L   T  +G +MV IA   PF  LDDL+SAG+L+ F++T++  I+IR  + +          P     ++ LFN L    GL++            S                             +  G +            +       F+ PF P++P  G   +W L+ QL +  L   +  +GA   +YF YG KHSVG
Sbjct:  433 TIMAQPRLQYAMSIDGLLPPIFAHVDSTGNLWHGTLISGTIMVVIATCVPFTYLDDLISAGILVAFSMTDASVILIRHQSPEYAAGTTTTTTPYWLEIMLCLFNVLSFVQGLVLGNYMHHVFGISVSVMIGLVLIGLVYGIATYCPKSSVFGGGRMMGGGKMHQIDEYGXXXXEYGAAAAGRFQTPFVPYLPLAGAFANWYLIAQLEFFGLFLLVLYIGASIFYYFAYGAKHSVG 667          
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A485KT68_9STRA (Aste57867_11508 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KT68_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 6.420e-15
Identity = 64/230 (27.83%), Postives = 97/230 (42.17%), Query Frame = 1
Query:    1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASL-RWTLWAVGAVSLWYFTYGLKHSVGQ 687
            +F  QPRL++ ++ DGLLP+     D++G L   T  +G     +A   PF  + ++VS G+LL F +TNS  I++R  +  P F               L G + V  A AA   +                                  AG+V    +    + P  +     FR P  P+VPA+   I+W L+ Q+    L R  +W +GA  + YF YG  HS G+
Sbjct:  335 SFLAQPRLMYAMSVDGLLPEIFGRVDKKGNLFWCTLLSGSFFCVVAFLVPFDAIWNMVSIGILLSFNMTNSALILVRTRDASPSF------------VYKLTGAIFVVAAVAAFVFQ----------------VGYMTNGETWALALSLALAGVVLALAAFIYAKCPQNIADENLFRAPLVPFVPAVAMLINWYLIAQMEPKDLGRAAIW-IGAAIVSYFLYGFSHSQGR 535          
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A067BRM8_SAPPC (AA_permease_C domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BRM8_SAPPC)

HSP 1 Score: 85.5 bits (210), Expect = 1.170e-14
Identity = 63/228 (27.63%), Postives = 103/228 (45.18%), Query Frame = 1
Query:    4 FQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVGQ 687
            F  QPRL++ ++ DGLLPK     ++ G L  +T   GG    +A+F PF+ L +LVS G+L+ F +TNS  I+ R  +                + +    G LV  +C +     +                              L A ++ALA++I   + P  +G  E +R P  P+VPA+   I+W L+ QL    + +    +G   ++YF YG ++S G+
Sbjct:  333 FLAQPRLMYAMSVDGLLPKIFGKVEKNGNLFWSTFLCGGFFCLVALFVPFSYLWNLVSFGILMSFNMTNSALILNRTRDSSA-------------HIVYKLTGALVATSCLSMFLFEKGYVEATDSATGYLIVSMV------------LLAVVLALAITIFV-KCPQNVGPRECYRAPLVPFVPALAITINWFLIAQLPARDIGYGFIWIGVAIVFYFAYGFRNSAGK 534          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQA2_ECTSI6.370e-19092.20Cationic amino acid transporter-like protein n=2 T... [more]
A0A7S4J7E7_9STRA2.510e-2032.33Hypothetical protein n=3 Tax=Odontella aurita TaxI... [more]
A0A7S4IL23_9STRA2.740e-1929.36Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S1Z7M8_TRICV1.330e-1730.20Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6G0WND0_9STRA1.820e-1630.43AA_permease_C domain-containing protein n=1 Tax=Ap... [more]
W4GW16_9STRA8.250e-1628.09AA_permease_C domain-containing protein n=4 Tax=Ap... [more]
A0A7S1CXR0_CYCTE3.130e-1530.63Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2IG81_9STRA5.620e-1528.09Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A485KT68_9STRA6.420e-1527.83Aste57867_11508 protein n=1 Tax=Aphanomyces stella... [more]
A0A067BRM8_SAPPC1.170e-1427.63AA_permease_C domain-containing protein n=3 Tax=Sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18885contigEcto-sp13_S_contig18885:106..3386 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score551.6
Seed ortholog evalue2.6e-154
Seed eggNOG ortholog2880.D8LQA2
Model size1014
KEGG koko:K03294
KEGG TC2.A.3.2
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0016020,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0042170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0098588,GO:0098805
Exons4
EggNOG free text desc.amino acid transport
EggNOG OGsCOG0531@1,KOG1286@2759
Ec32 ortholog descriptioncationic amino acid transporter-like protein
Ec32 orthologEc-26_005560.1
Cds size1014
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462964.5356011-CDS-Ecto-sp13_S_contig18885:105..3381681462964.5356011-CDS-Ecto-sp13_S_contig18885:105..338Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18885 106..338 +
1681462964.54577-CDS-Ecto-sp13_S_contig18885:849..11381681462964.54577-CDS-Ecto-sp13_S_contig18885:849..1138Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18885 850..1138 +
1681462964.5539496-CDS-Ecto-sp13_S_contig18885:1927..20701681462964.5539496-CDS-Ecto-sp13_S_contig18885:1927..2070Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18885 1928..2070 +
1681462964.562163-CDS-Ecto-sp13_S_contig18885:3037..33861681462964.562163-CDS-Ecto-sp13_S_contig18885:3037..3386Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18885 3038..3386 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18885.5962.1prot_Ecto-sp13_S_contig18885.5962.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18885 106..3386 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18885.5962.1

>prot_Ecto-sp13_S_contig18885.5962.1 ID=prot_Ecto-sp13_S_contig18885.5962.1|Name=mRNA_Ecto-sp13_S_contig18885.5962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=338bp
TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAP
FAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALC
LAGGLLVRVACAATTAEGRSGGGGGGGGGGSTAAEAAEATAATAAALAFL
AAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLS
WASLRWTLWAVGAVSLWYFTYGLKHSVGQKSRTWPQLAAATAAAASNTST
GEESLLESPPNIPEFGSGKRMGGNHGRGARGKRERSQLRATFPGEPPLDA
VSPARGGSTGRSSGDEGEGFAVGAQKEEGYMSFAALT*
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mRNA from alignment at Ecto-sp13_S_contig18885:106..3386+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18885.5962.1 ID=mRNA_Ecto-sp13_S_contig18885.5962.1|Name=mRNA_Ecto-sp13_S_contig18885.5962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18885:106..3386+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACGTTTCAGGTTCAACCTCGGCTGCTGTTTGTCCTCGCGAGCGACGGCCT GTTGCCCAAGTCCTTGGCGTCGACGGACGAGAGAGGCGTGCTCACGACGG CAACGACTGCGGCGGGAGGGGTGATGGTGGCGATCGCTATGTTTGCGCCG TTCGCCGTCCTCGACGACCTAGTTTCGGCGGGGGTGCTGCTGTGCTTCGC CGTCACCAACTCGTGCGCCATCGTGATCAGGAGGTGTGTGTGTGTGTCAT TTCCGTTGGTGTACCCGATAGGCGCTTGTCGGAATGGGAGCGACGGGGGT TCGATGACAACGTGTCTCCCCCCGACCTTCTCTTTGAGGGGTCTGTCGAG TGTTTTGGTTTTGTTTTGTGACACCGGCTGGTACGTCAAATGTGCACAGG AAGGTGTAGGCTGCCGCCAGAATGGACAGGATGGAAGCACACGCACAGTA CACACCGGCACACGTGTTTTCCCGCACGACCTGTGGTGTTTTTGTTGCTC CGCACCGCCACCCACGCCCGTGGTCAATGGTCTCACTGCTATGGCACGCA AAACACAAGAGTACGCATCCCCCACCCACCCCCACGCCCACCCCAAGCAC CTCCCCTCTCCGTGCCCTTGTTCCCCTTCGCCATGTCAACGAAACCATTA TTACACCCAGATGCAACCTCGATTCAATCTTCCCCCCCCTCACCCCCGCC ACCCCCCCTGCCTTTGTTCCCGCGACAACAAAACCGCTACACAGGTCCAA CCTCGACCCAATCTTCCCGGGCCCTTGCCGCCCCCTGGTGCTTCTCTTCA ACGCTCTCTGCCTTGCGGGTGGCCTGCTGGTGCGAGTGGCGTGTGCGGCG ACGACGGCGGAAGGTCGTAGCGGGGGCGGGGGCGGCGGCGGGGGTGGCGG TAGCACCGCGGCGGAGGCGGCGGAGGCGACGGCGGCGACGGCAGCGGCGC TGGCATTTCTCGCGGCCGGGCTGGTGGCGCTGGCGCTGTCGATTTGTTGT CCGGAACTGCCGCACCCACTAGGCGGTCCTGAGGTAAGATTACTTCCTCG CTGGAATCCGCTACCTCCCTCTCTGCAGCATAGTGCTCTATAGCACACAC ATGACACTGTTGGTAGAGTTACAGCACTTGTTCTTCTTGTGATGCTGTAC CGGGTAGCTTGTCTTCGTGGGAGCGCGACCGGCGACGGGGGTGCGCTGGG AAGCGTGGTGGATGGCTTGTAGCTCACGTATCCTTGCAGGTTGGGGGGGA GGGAGGGGTAACGGCTACCCCGCAAGAATGCCGTCCTAGTGTTGTTACGG ATATGGTACTCGCGAAGGTCTATGGAATTGGTATATTTTGACAGGAGATG TAAGCAGCAGTGGATGGGAATGTTCATCGAGGCCGGCCTCTTGCGGGTGT AAAGAGTGGCTTGGCGATGAATGGGGTCTTGCAGAGTTTGCCTCTTTTGG CACCCCCCCCTCTGCGCACCCTTCATGCGACTCGCCGAATACCTCACGGC GCTCGGTGCTTGGTGATGTTAGAGCCTGGTCCGGTGAGAATCCGGCGTGC TCCGTCCCGGCTCTGTAGGGATGAGAGGTTAATGGTCTAACGACTACGGC ATGCACGACTTTGAGTATGCGTACACCCCCCCGCCTTTGTCTCTGTCGCT CACACGACACTTTCGGCACAGTTTTAGGGGTTAGATACTCGGACGCCGGC ACCTCTACAGCCGTCGCTTGGCACACCTACACCCCACACATCTCACCAAC GATTTTGTTCCTCGCGCATTCTTTTTTTCCGGTCGTCTTCTTCGCCTCGT GCCTCTTTCCCGCCGTGGCCAGGCGTTCCGAGGTCCGTTTTCCCCTTGGG TGCCCGCCATAGGCACCGCAATAAGCTGGATCCTTTTGACCCAGCTAAGC TGGGCGAGTCTGCGGTGGACCCTGTGGGCGGTGGGGGCGGTTTCCTTGTG GTACTTCACGTACGGGTGAGTAGGAGTTCAAGGGGGGGGGAAGGGGCTAA TGTTAACGCATGTTGTAGTCGGGAGACCGTTGACCTCGCATCCCTGCATT GCCGGGACAGAGCATCATGTGAGGGGGGCGGGGGGCCGGGGGCCGGGGGC CGGGGGCCGGGGAGGTTCTCATGTAAGAGCATGTTGTAGTCGTTAGACCA TTGACCTCACATCCCTACGAAGCCGGAACGGAGGGAGCGATTTGCCGGGT TTCCTCCGGGCCAGGCTAAGCTTCACAAGGACGTACCAGAAGCTGGCCAT CATCCTTGCGGTTGCTGTGCGAAACCCGGAATGTCATCGGTTGATTGGGG AGGGGAAGGGCTCTGTACTGCTATTTTTTTGCTTACGGGGGCATGGGGAT ATTGATTCGCAGTTTTTTTGTCCGAGCGGTGTTTGCACTTGCGAACAGCT TGGGAAAATTGGGAGCGTTGGGGTAATGTACTCCGGTAGCCAGTTCCGCA GCTCGTGCGGGGAAATGCCGAGCCTCTTGCGGACATGACATTGCTTTGCA GACGGTCTGCTTCTCCGGAGCAAGTTTTTGAGTTTTTGCACACACAAAAG GGATTCCATCCCTCTCGGCCACCGTGAACACCCCACCTACCGTTCCCCCC CCCCTACGCTGCCCTAAAACAGTGCTGTGATACAAAAGAAACAGCAACAA CCAGGACGGATGAAAACTGAAATAATGTTCAGTTTCCTCCTTTATCGCAA AGCCCATACCCACCACCACCACCACGAGCAACAGCAACAACATCACGATG GCCGATGTGCTCACGCGATCCGCGATGCATCGTAGGCGACGAAAGACAAA GCGCATGCATACAGCAGCACAGCAGTTCTCGGGTGGGTCTCGAGTGGGTC CCTTCTTTCCGGTCTCTCACCGGACCACAACCAACCGGCGCCGCTCCTGT TTTTCTTTTTTCTCCCGTGCGCGCGTGGAAAGGCTGAAGCACAGCGTGGG CCAAAAGTCACGGACATGGCCCCAGCTAGCGGCAGCCACAGCGGCGGCGG CATCGAACACCTCCACGGGGGAGGAAAGCCTCCTAGAATCGCCGCCGAAC ATACCGGAGTTTGGGTCGGGGAAGAGGATGGGGGGCAACCACGGCAGAGG GGCGCGCGGCAAGCGCGAGCGGTCACAGCTGAGGGCGACGTTCCCGGGAG AGCCGCCACTAGACGCCGTGTCGCCAGCGAGGGGGGGTTCGACGGGGAGA TCATCAGGGGACGAGGGGGAAGGCTTCGCGGTTGGGGCGCAGAAGGAGGA AGGGTATATGTCGTTCGCCGCGCTGACGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18885:106..3386+

>mRNA_Ecto-sp13_S_contig18885.5962.1 ID=mRNA_Ecto-sp13_S_contig18885.5962.1|Name=mRNA_Ecto-sp13_S_contig18885.5962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1014bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18885:106..3386+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACGTTTCAGGTTCAACCTCGGCTGCTGTTTGTCCTCGCGAGCGACGGCCT
GTTGCCCAAGTCCTTGGCGTCGACGGACGAGAGAGGCGTGCTCACGACGG
CAACGACTGCGGCGGGAGGGGTGATGGTGGCGATCGCTATGTTTGCGCCG
TTCGCCGTCCTCGACGACCTAGTTTCGGCGGGGGTGCTGCTGTGCTTCGC
CGTCACCAACTCGTGCGCCATCGTGATCAGGAGGTCCAACCTCGACCCAA
TCTTCCCGGGCCCTTGCCGCCCCCTGGTGCTTCTCTTCAACGCTCTCTGC
CTTGCGGGTGGCCTGCTGGTGCGAGTGGCGTGTGCGGCGACGACGGCGGA
AGGTCGTAGCGGGGGCGGGGGCGGCGGCGGGGGTGGCGGTAGCACCGCGG
CGGAGGCGGCGGAGGCGACGGCGGCGACGGCAGCGGCGCTGGCATTTCTC
GCGGCCGGGCTGGTGGCGCTGGCGCTGTCGATTTGTTGTCCGGAACTGCC
GCACCCACTAGGCGGTCCTGAGGCGTTCCGAGGTCCGTTTTCCCCTTGGG
TGCCCGCCATAGGCACCGCAATAAGCTGGATCCTTTTGACCCAGCTAAGC
TGGGCGAGTCTGCGGTGGACCCTGTGGGCGGTGGGGGCGGTTTCCTTGTG
GTACTTCACGTACGGGCTGAAGCACAGCGTGGGCCAAAAGTCACGGACAT
GGCCCCAGCTAGCGGCAGCCACAGCGGCGGCGGCATCGAACACCTCCACG
GGGGAGGAAAGCCTCCTAGAATCGCCGCCGAACATACCGGAGTTTGGGTC
GGGGAAGAGGATGGGGGGCAACCACGGCAGAGGGGCGCGCGGCAAGCGCG
AGCGGTCACAGCTGAGGGCGACGTTCCCGGGAGAGCCGCCACTAGACGCC
GTGTCGCCAGCGAGGGGGGGTTCGACGGGGAGATCATCAGGGGACGAGGG
GGAAGGCTTCGCGGTTGGGGCGCAGAAGGAGGAAGGGTATATGTCGTTCG
CCGCGCTGACGTGA
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