mRNA_Ecto-sp13_S_contig18885.5962.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: D8LQA2_ECTSI (Cationic amino acid transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQA2_ECTSI) HSP 1 Score: 548 bits (1413), Expect = 6.370e-190 Identity = 319/346 (92.20%), Postives = 325/346 (93.93%), Query Frame = 1
Query: 1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAAT---------TAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVGQKSRTWPQLAAATAAAASNTSTGEESLLESPPNIPEFGSGKRMGGNHGRGARGKRERSQLRATFPGEPPLDAVSPARGGSTGRSSGDEGEGFAVGAQKEEGYMSFAALT 1011
+F VQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIA FAPFAVLDDLVSAGVLLCFA+TNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAA TA XXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPA+GTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVGQKSRTWPQLAAATAAAASNTSTGEESLLESPP+ PEFGSGKRMGGNH RGA GKRERSQLRATFPGEPPLD+VSPARGGSTGR SG+EGEG AVGAQKEEGYMSFAALT
Sbjct: 343 SFLVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIATFAPFAVLDDLVSAGVLLCFAITNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAAADRVSLSVAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPAVGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVGQKSRTWPQLAAATAAAASNTSTGEESLLESPPSTPEFGSGKRMGGNHDRGAGGKRERSQLRATFPGEPPLDSVSPARGGSTGRLSGEEGEGLAVGAQKEEGYMSFAALT 688
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A7S4J7E7_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J7E7_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.510e-20 Identity = 75/232 (32.33%), Postives = 106/232 (45.69%), Query Frame = 1
Query: 1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLG----GPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVG 684
T QPRL + ++ DGLLP A DE G L T +G +MV IA F PF LDDL+SAG+L+ F++T++ +++R N D P L+ LF+ + L + +T FL LV + CP G + F P P++P +GT I+W L+ QL W L + VG ++YF+YGLKHSVG
Sbjct: 366 TIMAQPRLQYAMSIDGLLPPIFAQIDETGNLWFGTLISGILMVLIATFVPFVYLDDLISAGILVAFSMTDTSVVLLRHDNPDDN-PNLLEKLLGLFHTVSFVTSLALGHCIGSTVGS-----------------------ILTLSSCIFL---LVLTRMISKCPLKSSKCGVNSSDSDFFEAPLVPYLPLLGTFINWYLIAQLEWLGLTLLVAYVGISVVFYFSYGLKHSVG 570
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A7S4IL23_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IL23_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 2.740e-19 Identity = 69/235 (29.36%), Postives = 113/235 (48.09%), Query Frame = 1
Query: 1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSIC-----CP--ELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVG 684
+ QPRL + +A+DGL+P A D G L T +G VM+ IA F PF L+DL+SAG+L+ F +T+S I++R ++ + P L+++FN L + GLL+ + + F A G+VAL + + CP +L + +G F+ PF P++P +G+ ++W L+ L + + V + Y+ YG+K SVG
Sbjct: 383 SIMAQPRLQYAMATDGLIPPIFAKMDANGNLWWGTLISGIVMILIATFVPFTFLNDLISAGILIAFTITDSSVILLRHASPEDK-PLLLEKLLVVFNILAIISGLLLSNYMDSDAGQ------------------------------VFAAFGVVALIILMVEIKRQCPPLDLSNVMGSSAGFKTPFMPFLPLLGSVVNWYLIAHLDSYDIVLLIVYCAVVMVGYYLYGIKRSVG 586
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A7S1Z7M8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z7M8_TRICV) HSP 1 Score: 94.4 bits (233), Expect = 1.330e-17 Identity = 74/245 (30.20%), Postives = 109/245 (44.49%), Query Frame = 1
Query: 1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPC--RPLVLLFNAL-CLAG------------GLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLG--GPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVG 684
+ QPRL F +A+DGLLP D G L T +G VM+ IA PF L+DL+SAG+L+ F +T++ I++R ++ + PC L+ +FN L C++G LL V+CAA A G + + CP L G +F+ P P++P GT ++W L+ L L + +G L+YF YG+KHSVG
Sbjct: 385 SIMAQPRLQFAMATDGLLPSIFGRLDSNGNLWWGTLISGIVMIIIATCVPFTFLNDLISAGILVAFTITDASVIILRHASPEN---SPCLLEKLLGVFNILSCISGLFLTKCLDTDIGKLLAGVSCAALLAVG--------------------------------------VEIKRRCPPLEGEAAVVGDASFKTPLMPYLPLAGTVVNWYLIAHLDAYDLILLVLYLGVALLFYFCYGVKHSVG 588
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A6G0WND0_9STRA (AA_permease_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WND0_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.820e-16 Identity = 70/230 (30.43%), Postives = 103/230 (44.78%), Query Frame = 1
Query: 4 FQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGL-VALALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASL-RWTLWAVGAVSLWYFTYGLKHSVGQ 687
F QPRLL+ ++ DGLLP+ + D G L T +G + +A+F PFA L ++VS G+L+ F +TNS IV+R P G +V ++CAA +S FLAA VA + CPE G P FR P P+VP + ++W L+ QL+ + R +W A+ + YF YG ++S G+
Sbjct: 327 FLAQPRLLYAMSVDGLLPQVFSQVDSNGNLFWGTLLSGTALALVALFEPFATLWNMVSFGILVSFIMTNSALIVVRTRESSP-------------QKSYSLTGTIVALSCAAMFVFQKSYVDRDSAAGLVISMV-------------FLAATFGVAAVIFFTCPENQ---GEPNMFRAPLVPFVPMLAIVVNWYLIPQLNEKDIARGCIWIAAAI-VSYFLYGFRNSAGR 526
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: W4GW16_9STRA (AA_permease_C domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GW16_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 8.250e-16 Identity = 66/235 (28.09%), Postives = 104/235 (44.26%), Query Frame = 1
Query: 4 FQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVAL------ALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASL-RWTLWAVGAVSLWYFTYGLKHSVGQ 687
F QPRL++ L+ DGL+P+ D +G L T AGG V +A PF + ++VS G+L+ F +TNS ++IR P L A +A + +GRS ++ GL+A+ AL + CP+ +GG + FR P P++P + ++W L+ QL+ + R +W +G + YF YG HS G+
Sbjct: 346 FLAQPRLMYALSVDGLIPEIFGRVDSKGNLFWCTVIAGGFFVVVAFVIPFGAIWNIVSFGILVSFIMTNSSLLLIRTRESSP-------GLAYKLTAAAVAASCAAMMTFQKGFVDGRSHVALG------------------------VSMGLLAVTFALGTALYVKCPQN---IGGADMFRAPLVPFIPLLSITVNWFLVAQLAEKDIARGCIW-IGCAIIAYFLYGFSHSEGR 545
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A7S1CXR0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXR0_CYCTE) HSP 1 Score: 86.7 bits (213), Expect = 3.130e-15 Identity = 68/222 (30.63%), Postives = 94/222 (42.34%), Query Frame = 1
Query: 13 QPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELP--------HPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWY 654
QPRLL +A DGLLP+ L D G L +G M IA PF L+DL+SAG+L+ F++TNSC +++R + P P L++L+NALC A GL + +T S L L L CP G + P PW P +G ++W L+ QLSW L + + +LWY
Sbjct: 195 QPRLLQAMALDGLLPEFLGRVDNNGNLRMGALISGVGMTIIASCVPFRYLNDLISAGILVAFSMTNSCLVLLRCES-PPNKPHLLERLLVLYNALCFATGLSLTRNKVLSTVSVVSV----------------------------LLTMLTFHQLWRSCPRTTVFGGSIFRMEDGAVSYYETPLVPWTPCLGMFVNWYLVAQLSWFGLFLLIGYLSLATLWY 387
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A7S2IG81_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IG81_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 5.620e-15 Identity = 66/235 (28.09%), Postives = 97/235 (41.28%), Query Frame = 1
Query: 1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLD-------PIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVG 684
T QPRL + ++ DGLLP A D G L T +G +MV IA PF LDDL+SAG+L+ F++T++ I+IR + + P ++ LFN L GL++ S + G + + F+ PF P++P G +W L+ QL + L + +GA +YF YG KHSVG
Sbjct: 433 TIMAQPRLQYAMSIDGLLPPIFAHVDSTGNLWHGTLISGTIMVVIATCVPFTYLDDLISAGILVAFSMTDASVILIRHQSPEYAAGTTTTTTPYWLEIMLCLFNVLSFVQGLVLGNYMHHVFGISVSVMIGLVLIGLVYGIATYCPKSSVFGGGRMMGGGKMHQIDEYGXXXXEYGAAAAGRFQTPFVPYLPLAGAFANWYLIAQLEFFGLFLLVLYIGASIFYYFAYGAKHSVG 667
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A485KT68_9STRA (Aste57867_11508 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KT68_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 6.420e-15 Identity = 64/230 (27.83%), Postives = 97/230 (42.17%), Query Frame = 1
Query: 1 TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASL-RWTLWAVGAVSLWYFTYGLKHSVGQ 687
+F QPRL++ ++ DGLLP+ D++G L T +G +A PF + ++VS G+LL F +TNS I++R + P F L G + V A AA + AG+V + + P + FR P P+VPA+ I+W L+ Q+ L R +W +GA + YF YG HS G+
Sbjct: 335 SFLAQPRLMYAMSVDGLLPEIFGRVDKKGNLFWCTLLSGSFFCVVAFLVPFDAIWNMVSIGILLSFNMTNSALILVRTRDASPSF------------VYKLTGAIFVVAAVAAFVFQ----------------VGYMTNGETWALALSLALAGVVLALAAFIYAKCPQNIADENLFRAPLVPFVPAVAMLINWYLIAQMEPKDLGRAAIW-IGAAIVSYFLYGFSHSQGR 535
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Match: A0A067BRM8_SAPPC (AA_permease_C domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BRM8_SAPPC) HSP 1 Score: 85.5 bits (210), Expect = 1.170e-14 Identity = 63/228 (27.63%), Postives = 103/228 (45.18%), Query Frame = 1
Query: 4 FQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPFAVLDDLVSAGVLLCFAVTNSCAIVIRRSNLDPIFPGPCRPLVLLFNALCLAGGLLVRVACAATTAEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLAAGLVALALSICCPELPHPLGGPEAFRGPFSPWVPAIGTAISWILLTQLSWASLRWTLWAVGAVSLWYFTYGLKHSVGQ 687
F QPRL++ ++ DGLLPK ++ G L +T GG +A+F PF+ L +LVS G+L+ F +TNS I+ R + + + G LV +C + + L A ++ALA++I + P +G E +R P P+VPA+ I+W L+ QL + + +G ++YF YG ++S G+
Sbjct: 333 FLAQPRLMYAMSVDGLLPKIFGKVEKNGNLFWSTFLCGGFFCLVALFVPFSYLWNLVSFGILMSFNMTNSALILNRTRDSSA-------------HIVYKLTGALVATSCLSMFLFEKGYVEATDSATGYLIVSMV------------LLAVVLALAITIFV-KCPQNVGPRECYRAPLVPFVPALAITINWFLIAQLPARDIGYGFIWIGVAIVFYFAYGFRNSAGK 534 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18885.5962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18885.5962.1 >prot_Ecto-sp13_S_contig18885.5962.1 ID=prot_Ecto-sp13_S_contig18885.5962.1|Name=mRNA_Ecto-sp13_S_contig18885.5962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=338bp TFQVQPRLLFVLASDGLLPKSLASTDERGVLTTATTAAGGVMVAIAMFAPback to top mRNA from alignment at Ecto-sp13_S_contig18885:106..3386+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18885.5962.1 ID=mRNA_Ecto-sp13_S_contig18885.5962.1|Name=mRNA_Ecto-sp13_S_contig18885.5962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18885:106..3386+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18885:106..3386+ >mRNA_Ecto-sp13_S_contig18885.5962.1 ID=mRNA_Ecto-sp13_S_contig18885.5962.1|Name=mRNA_Ecto-sp13_S_contig18885.5962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1014bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18885:106..3386+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |