prot_Ecto-sp13_S_contig1876.5904.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1876.5904.1
Unique Nameprot_Ecto-sp13_S_contig1876.5904.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length129
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1876.5904.1 vs. uniprot
Match: A0A6H5JFG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG4_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 2.690e-44
Identity = 94/116 (81.03%), Postives = 95/116 (81.90%), Query Frame = 0 
Query:   22 KKKIEDVRRRENIKSERRRSLLLRQQTDLFSKQHPFTPTFFSSARQGRSKSRGGVGGGGTRNAPRYPNEIAADRAAAAAAAVG---------AAEVSEDREEGMLGAGASPGGVES 128
            K K+EDVRRRENIKSERRRSLLLRQQTDLFSKQHPFTPTFFSSARQGRSKSRGGVGGGGTRNAPRYPNEIAADRAAA               AAEVSEDRE  M GAGA P GVES
Sbjct:  293 KTKMEDVRRRENIKSERRRSLLLRQQTDLFSKQHPFTPTFFSSARQGRSKSRGGVGGGGTRNAPRYPNEIAADRAAAXXXXXXXXXXXXXXXAAEVSEDREGAMPGAGALPEGVES 408
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BLAST of mRNA_Ecto-sp13_S_contig1876.5904.1 vs. uniprot
Match: D7FI24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI24_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 5.400e-33
Identity = 84/118 (71.19%), Postives = 86/118 (72.88%), Query Frame = 0 
Query:   22 KKKIEDVRRRENIKSERRRSLLLRQQTDLFSKQHPFTPTFFSSARQGRSKSRGGVGGGG-TRNAPRYPNEIAADRAAAAAAAVGA----------AEVSEDREEGMLGAGASPGGVES 128
            KKK+EDVRRRENIKSERRRSLLLRQQTDLFSKQHPFTPTFFSS RQGRSKSRGG       RNAPRYPNEIAADRA                   AEVSEDRE  + GAGA P GVES
Sbjct: 1138 KKKMEDVRRRENIKSERRRSLLLRQQTDLFSKQHPFTPTFFSSTRQGRSKSRGGAXXXXXARNAPRYPNEIAADRAXXXXXXXXXXXXXXXXXXXAEVSEDREGEIPGAGALPEGVES 1255
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1876.5904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JFG4_9PHAE2.690e-4481.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI24_ECTSI5.400e-3371.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1876contigEcto-sp13_S_contig1876:3023..3409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1876.5904.1mRNA_Ecto-sp13_S_contig1876.5904.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1876 3023..3409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1876.5904.1 ID=prot_Ecto-sp13_S_contig1876.5904.1|Name=mRNA_Ecto-sp13_S_contig1876.5904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp
VFLFHSLHLNSHVTNTNVPRRKKKIEDVRRRENIKSERRRSLLLRQQTDL
FSKQHPFTPTFFSSARQGRSKSRGGVGGGGTRNAPRYPNEIAADRAAAAA
AAVGAAEVSEDREEGMLGAGASPGGVES*
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