prot_Ecto-sp13_S_contig18727.5893.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18727.5893.1
Unique Nameprot_Ecto-sp13_S_contig18727.5893.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length315
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18727.5893.1 vs. uniprot
Match: A0A6H5KCA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA0_9PHAE)

HSP 1 Score: 383 bits (983), Expect = 1.290e-130
Identity = 226/246 (91.87%), Postives = 232/246 (94.31%), Query Frame = 0 
Query:   70 MRAVGLVRVGEDSRDEGESQSPGRAGEKGRRGDGGGWRLPTRVVEEMRREFDRKMDQESAEVLEQENKALLEARARLAEREGAKTKRELQDLSERLTNDGRDALASLRRDLEAKEEKRLAEERGNLKVALARALQQERERLVTERKLKVFDARDASGRESSQVAANLWEQAERSTSARRGEAVRLLNEAADRARVKLDELLAKQEEQGLRAIRDRSSAERKAALKRIREEGKRRCLNELKALADGA 315
            MRAVGLVR GEDS DEGESQSPGR GE+GRRG GGGWRLPTRVVEEMRREFDRKMDQESAE    ENKALLEARARLAEREGA+TKRELQDLSERLTNDGRDALAS RRDLEA+EEKRLAEERGNLK ALARALQQERERLVTERKLKVFDARDASGRESSQVAANLWEQAERSTSARR E VRLL+EAADRARVKLDELLA+QEEQGLRAIRDRSSAERKAALKRIREEG+RRCL ELKALAD A
Sbjct:    1 MRAVGLVRDGEDSTDEGESQSPGRVGERGRRGGGGGWRLPTRVVEEMRREFDRKMDQESAE----ENKALLEARARLAEREGARTKRELQDLSERLTNDGRDALASFRRDLEAEEEKRLAEERGNLKEALARALQQERERLVTERKLKVFDARDASGRESSQVAANLWEQAERSTSARREEVVRLLDEAADRARVKLDELLAEQEEQGLRAIRDRSSAERKAALKRIREEGERRCLKELKALADSA 242
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BLAST of mRNA_Ecto-sp13_S_contig18727.5893.1 vs. uniprot
Match: D7FK94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK94_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 2.530e-130
Identity = 251/329 (76.29%), Postives = 265/329 (80.55%), Query Frame = 0 
Query:    1 MKREEDSWKTAAMQRARRDLRTASTTCEEYPVFAAGRNPAASTTLLFGSTSLEERTRDRIAEEGPGEEAMRAVGLVRVGEDSRDEGESQSPGRAGEKGRRGDGGGWRLPTRVVEEMRREFDRKMDQESAEVLEQENKALLEARARLAEREGAKTKRELQDLSERLTNDGRDALASLRRDLEAKEEKRLAEERGNLKVALARALQQER----------ERLVTER----KLKVFDARDASGRESSQVAANLWEQAERSTSARRGEAVRLLNEAADRARVKLDELLAKQEEQGLRAIRDRSSAERKAALKRIREEGKRRCLNELKALADGA 315
            +KREEDSWKT+AMQRARRDLRTAS+T EEYPVFAAGRNPAASTTL  GSTSLEERTRDRIAEEGPGEEAMRAVGLVR GEDS                     GGWRLP RVVEEMRREFDRKMDQESAEVLEQENKALLEARARLAEREGA+TKRELQDLSERLTNDGRDALASLRR+LE +EEKRLAEERGNLK ALA  L              + L + R     ++ F     S RESS VAANLW+QAERSTSARR EA+RLL EAADRARVKLDELL +QEEQGLRAIRDRSSAERKAALKRIREEG+RRCL ELKALADGA
Sbjct:  302 LKREEDSWKTSAMQRARRDLRTASSTYEEYPVFAAGRNPAASTTLFSGSTSLEERTRDRIAEEGPGEEAMRAVGLVRDGEDSXXXXXXXXXXXXXXXXXXXXXGGWRLPMRVVEEMRREFDRKMDQESAEVLEQENKALLEARARLAEREGARTKRELQDLSERLTNDGRDALASLRRELEVEEEKRLAEERGNLKEALAHDLPSSTPSEPPSNTLYKSLNSNRGERHNIRHFFCCCTSRRESSHVAANLWKQAERSTSARREEALRLLGEAADRARVKLDELLVEQEEQGLRAIRDRSSAERKAALKRIREEGERRCLKELKALADGA 630
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18727.5893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCA0_9PHAE1.290e-13091.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK94_ECTSI2.530e-13076.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 252..276
NoneNo IPR availableCOILSCoilCoilcoord: 173..193
NoneNo IPR availableCOILSCoilCoilcoord: 117..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18727contigEcto-sp13_S_contig18727:185..3386 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18727.5893.1mRNA_Ecto-sp13_S_contig18727.5893.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18727 185..3407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18727.5893.1 ID=prot_Ecto-sp13_S_contig18727.5893.1|Name=mRNA_Ecto-sp13_S_contig18727.5893.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=315bp
MKREEDSWKTAAMQRARRDLRTASTTCEEYPVFAAGRNPAASTTLLFGST
SLEERTRDRIAEEGPGEEAMRAVGLVRVGEDSRDEGESQSPGRAGEKGRR
GDGGGWRLPTRVVEEMRREFDRKMDQESAEVLEQENKALLEARARLAERE
GAKTKRELQDLSERLTNDGRDALASLRRDLEAKEEKRLAEERGNLKVALA
RALQQERERLVTERKLKVFDARDASGRESSQVAANLWEQAERSTSARRGE
AVRLLNEAADRARVKLDELLAKQEEQGLRAIRDRSSAERKAALKRIREEG
KRRCLNELKALADGA
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