mRNA_Ecto-sp13_S_contig18691.5878.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18691.5878.1 vs. uniprot
Match: D7FRA9_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA9_ECTSI) HSP 1 Score: 545 bits (1403), Expect = 1.040e-191 Identity = 260/268 (97.01%), Postives = 264/268 (98.51%), Query Frame = 1
Query: 100 KGSGGAAHDPEWYKTNGITILSRCQAVSVDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPLGCTFPDRFGFGSVHYLRDFGDTVKLVHAMARVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMPLVMVMPGEDVMSSSGFGKEVCYFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSSMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKV 903
+GSGG AHDPEWYKTNGITILSRCQAVSVDLDQKFLKVKRVTASNG+LVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPL CTFPDRFGFGSVHYLRDFGDTVKLVHAM RVEADGQDTCKEPVVLIGGGFISCEVAAAVAT+CPGM LVMVMPGEDVMSSSGFGKEVC+FYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSSMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKV
Sbjct: 50 EGSGGEAHDPEWYKTNGITILSRCQAVSVDLDQKFLKVKRVTASNGELVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIGGGFISCEVAAAVATHCPGMQLVMVMPGEDVMSSSGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSSMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKV 317
BLAST of mRNA_Ecto-sp13_S_contig18691.5878.1 vs. uniprot
Match: A0A7S2SVG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVG3_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.580e-38 Identity = 96/280 (34.29%), Postives = 138/280 (49.29%), Query Frame = 1
Query: 73 SSSDFPFVCKGSGGAAHDPEWYKTNGITILSRCQAVS-----VDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPLGCTFPDRFGFGSVHYLRDFGDTVKLVHAMARVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMPLVMVMPGEDVMSS---SGFGKEVCYFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSSMKKTFPRTFGPADPHFTDCRGVVLSNTQ 888
SSS KGSGG D WY+ +G+ L +C+ + + DQ L V +V A QL VV ++ + G R + AD S + + L D + S + T +R+GFGS+H L F D K V A+ R E DGQ+TC +PVV++G G + +V A + + P +P+V+V+PG ++ S ++ FYE+QL + V A+GY V R W E G F TLE G ++ T PR F P F RG+VL Q
Sbjct: 76 SSSSVEEAAKGSGGVVMDATWYQGHGVEFLWQCEVTAWTKEPQEGDQGELHVLQVLADGRQLQVVCDEFVVGPQMDYSHGVRLHEGADAAASAPSPATDLHADVVI----DPENSTVSLTDSNRYGFGSIHTLTSFQDAFKFVVAVTRAEEDGQETCLDPVVVVGDGVEAMQVIAMLVKFLPDLPVVLVLPGGSLLPSLIPRAVPSDIRDFYERQLTKNNVKIARGYEVVRPWATTETGSFSTLEGPASG--LQPTRPRNFESCQPQFVQSRGLVLQRVQ 349
BLAST of mRNA_Ecto-sp13_S_contig18691.5878.1 vs. uniprot
Match: A0A7S4A4F3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4F3_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.870e-34 Identity = 89/262 (33.97%), Postives = 137/262 (52.29%), Query Frame = 1
Query: 214 KRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADE----------IKSLDNISKGLQGSCCCTRHPDVDGSPLGCTFP----------DRFGFGSVHYLRDFGDTVKLVHAMARVEADGQDTCKEPVVLIGGGFISCEVAAAVATYC-PGMPLVMV------MPG---EDVMSSSGF--GKEVCYFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSSMKKTFPRTFGPAD-PHFTDCRGVVLSNTQTGEK 900
K+VT + + GD ++ Y +L+IATGAR + + D+ + +I +G + C P GFGSVHYLRD GD K+ A++ EADGQ+TC +PVV++GGG ++ E+AA +A + +P+ +V MP ED+ +G K+V FYE+QL + GV F + +R RLW ++E G FPT+E S+++T PR F P +F+ CRG+V+ N + E+
Sbjct: 96 KKVTYRDA--ITGDEDEITYEKLIIATGARAKVLDDQPYLWQDKHSDVVDNGSIEEGGEDIACAPAXXXXXXXXXXXPAPRIRPWCLQADKNCGFGSVHYLRDIGDAAKVSEAVSMKEADGQETCSDPVVIVGGGILTMELAAKIARFRGQKVPVNVVLSRDRIMPKVFREDIAPEAGSLGAKDVAEFYERQLVKCGVKFIREHRCLRLWDVDESGEFPTMEGPA--ISLQRTRPRRFEPLQGEYFSTCRGIVVENNHSAER 353
BLAST of mRNA_Ecto-sp13_S_contig18691.5878.1 vs. uniprot
Match: D7FZW4_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW4_ECTSI) HSP 1 Score: 132 bits (333), Expect = 2.360e-31 Identity = 79/188 (42.02%), Postives = 105/188 (55.85%), Query Frame = 1
Query: 349 KGLQG----SCCCTRHPDVDGSPLGCTFPDRFGFGSVHYLRDFGDTVKLVHAMARVE----ADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMPLVMVMPGEDVMSSSGFGKEVCYFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSSMKKTFPRTFGPADPHFTDCRGVVLSNTQ 888
K LQG +C C RH D+ G L P+ +G GS HYLRD GD +KLV A++ V A G V L+GGG + EVAAA+ T+ PG+ +++M G +M F +E+ FYE++L + GV K RLWG+EE+G F TL G + FGPA FT+CRGVVL NT+
Sbjct: 130 KRLQGDQDSACFCVRHSDLRGPKL--DKPEAYGLGSAHYLRDVGDCIKLVKALSTVPSGGGAGGGTGDANTVALVGGGVLCMEVAAAIVTHYPGVRPILLMSGSRLMPDF-FNQEMSDFYEEKLKQAGVRLEKNVTAERLWGLEEQGEFDTLG----GRRVH------FGPAPRGFTECRGVVLRNTE 304
BLAST of mRNA_Ecto-sp13_S_contig18691.5878.1 vs. uniprot
Match: A0A836CH28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH28_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.220e-12 Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 694 LARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSSMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEK 900
LAR GV A GYRV RLW +EEEG P LE S G ++K+ PR +G ADP FT RGVVL+++Q+G +
Sbjct: 430 LARAGVCVAHGYRVERLWALEEEGDLPVLEYSPAG--LRKSTPRWWGKADPFFTTTRGVVLTDSQSGSQ 496
BLAST of mRNA_Ecto-sp13_S_contig18691.5878.1 vs. uniprot
Match: A0A2P6VGL1_9CHLO (Monodehydroascorbate reductase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VGL1_9CHLO) HSP 1 Score: 76.6 bits (187), Expect = 7.730e-12 Identity = 79/252 (31.35%), Postives = 104/252 (41.27%), Query Frame = 1
Query: 7 RPALSKTCLNPGAKGSRDFSCSSSSDFP--FVCKGSGGAAHDPEWYKTNGITILSRCQAVSVDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPLGCTFPDRFGFGSVHYLRDFGDTVKLVHAMARVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMPLVMVMPGEDVMSSSGFGKEVCYFYEKQLARVGVAFAKGYRVNRLWGIE 756
RPALSK L P A + P G GG PEWY GI ++ + +VD+ K L TA+ G+TI YG+L++ATGARP + D LQG VH LR+ D L+ AM +A G + V +GGG+I E AA +A G+ + +V P ED M S F E+ FYE A G+ KG V L G +
Sbjct: 433 RPALSKAYLFPEAP----------ARLPGFHTSVGGGGDRQAPEWYIEQGIDFVTGTKVTAVDVAGKQL----TTAA------GETIG--YGKLIVATGARPVTLTD----FKTPGADLQG---------------------------VHVLRNVQDADALIAAMQACKAAG-----DKAVCVGGGYIGMECAACLAMN--GLDVTVVFP-EDRMMSRLFTPEIAAFYEMFYADKGIKLIKGDVVTALEGTD 623
BLAST of mRNA_Ecto-sp13_S_contig18691.5878.1 vs. uniprot
Match: A0A2H5UW21_9ARCH (Putidaredoxin reductase n=1 Tax=archaeon HR01 TaxID=2035437 RepID=A0A2H5UW21_9ARCH) HSP 1 Score: 59.3 bits (142), Expect = 2.840e-6 Identity = 54/205 (26.34%), Postives = 87/205 (42.44%), Query Frame = 1
Query: 136 YKTNGITILSRCQAVSVDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPLGCTFPDRFGFGSVHYLRDFGDTVKLVHAMARVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMPLVMVMPGEDVMSSSGFGKEVCYFYEKQLARVGVAFAKGYRVNRLWG 750
Y N + +L +AV +++ +K VT ++G+ K+ YG+LL+ATG R RK+A E LD I +YLR D+ ++ A+A V++GGGFI CEVA+A+ Y G+ + +V D++S + +E + + +GV G V R G
Sbjct: 79 YLQNNVDMLLGNRAVEINVSEK-----TVTLADGR-------KINYGKLLLATGGRVRKLAVEGGDLDGI----------------------------------YYLRTIEDSERIKAALASAGK---------AVVVGGGFIGCEVASAL--YERGLEVTIVEVSNDLLSRA-LDQETASWITSRFREMGVKVRTGISVTRFLG 225
BLAST of mRNA_Ecto-sp13_S_contig18691.5878.1 vs. uniprot
Match: A0A191WDP7_9MICO (Uncharacterized protein n=1 Tax=Agromyces aureus TaxID=453304 RepID=A0A191WDP7_9MICO) HSP 1 Score: 58.5 bits (140), Expect = 5.240e-6 Identity = 69/248 (27.82%), Postives = 99/248 (39.92%), Query Frame = 1
Query: 7 RPALSKTCLNPGAKGSRDFSCSSSSDFPFVCKGSGGAAHDPEWYKTNGITILSRCQAVSVDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPLGCTFPDRFGFGSVHYLRDFGDTVKLVHAMARVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMPLVMVMPGEDVMSSSGFGKEVCYFYEKQLARVGVAFAKGYRVNRLWG 750
RP LSK LN S ++SS +P HD WY +GI + AV++D ++V+ + L Y RLL+ATGARPR+ T P G G VH LR D+ +L A+ R + VV++GGG+I EVAAA Y G + +V+ GE+ + ++ G+ V + + GV G V L G
Sbjct: 45 RPPLSKGYLNG--------SDAASSVYP----------HDRRWYGRHGIDLRLGTSAVALDPAAHTVEVEGADGVHATLD--------YDRLLLATGARPRRF---------------------------------TGPGA-GVGGVHVLRTLPDSTRLRTALRRGD--------RRVVVVGGGWIGLEVAAAARGY--GNEVTVVVRGEEPLEAA-IGRGVGSMFRGLHEQHGVVIRGGAAVTALRG 221
BLAST of mRNA_Ecto-sp13_S_contig18691.5878.1 vs. uniprot
Match: A0A1R1CUK1_9BACL (Ferredoxin reductase n=2 Tax=Paenibacillus sp. FSL H8-0548 TaxID=1920422 RepID=A0A1R1CUK1_9BACL) HSP 1 Score: 57.4 bits (137), Expect = 1.220e-5 Identity = 58/201 (28.86%), Postives = 89/201 (44.28%), Query Frame = 1
Query: 124 DPEWYKTNGITILSRCQAVSVDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPLGCTFPDRFGFGSVHYLRDFGDTVKLVHAMARVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMPLVMVMPGEDVMSSSGFGKEVCYFYEKQLARVGVAFAKG 726
D + + + I ++ C+AVS+D + ++++ NGQ + Y RLL+ATGA+PR+ +S L GS RF SV YLR FGD + L R+E + VV+IGGGFI EVAA+ A C G + ++ G ++ G + + + + GV F G
Sbjct: 60 DNKQLEEHRIELMKGCKAVSIDKNNHSVQLE-----NGQ-------NINYERLLLATGAQPRR----------LSIPLSGS------------------QSRFDTSSVLYLRSFGDALSL---RRRLEPGKR------VVIIGGGFIGLEVAAS-AREC-GCEVTVIEAGPRILMR-GVPEAIAAIVDARHRSAGVQFKLG 208
BLAST of mRNA_Ecto-sp13_S_contig18691.5878.1 vs. uniprot
Match: A0A533WXL7_9ARCH (Oxidoreductase n=5 Tax=Thaumarchaeota archaeon TaxID=2026795 RepID=A0A533WXL7_9ARCH) HSP 1 Score: 57.4 bits (137), Expect = 1.300e-5 Identity = 44/155 (28.39%), Postives = 65/155 (41.94%), Query Frame = 1
Query: 130 EWYKTNGITILSRCQAVSVDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPLGCTFPDRFGFGSVHYLRDFGDTVKLVHAMARVEADGQDTCKEPVVLIGGGFISCEVAAAVAT 594
E+Y+ I ++S +A +D + +K++ D +V +GRLL+ATG RPR + + GS L G +HYLR D ++ AM + V++GGGFI CEVAAA AT
Sbjct: 107 EFYENQKIEVISGKRATKLDKSGRVVKLE------------DDTEVAFGRLLLATGGRPRILP------------------------LPGSNL----------GGIHYLRTIDDCERIKEAMKKARN---------AVVVGGGFIGCEVAAAFAT 206 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18691.5878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18691.5878.1 >prot_Ecto-sp13_S_contig18691.5878.1 ID=prot_Ecto-sp13_S_contig18691.5878.1|Name=mRNA_Ecto-sp13_S_contig18691.5878.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=307bp MHRPALSKTCLNPGAKGSRDFSCSSSSDFPFVCKGSGGAAHDPEWYKTNGback to top mRNA from alignment at Ecto-sp13_S_contig18691:444..2750- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18691.5878.1 ID=mRNA_Ecto-sp13_S_contig18691.5878.1|Name=mRNA_Ecto-sp13_S_contig18691.5878.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2307bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18691:444..2750- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18691:444..2750- >mRNA_Ecto-sp13_S_contig18691.5878.1 ID=mRNA_Ecto-sp13_S_contig18691.5878.1|Name=mRNA_Ecto-sp13_S_contig18691.5878.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=921bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18691:444..2750- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |