mRNA_Ecto-sp13_S_contig1869.5875.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1869.5875.1 vs. uniprot
Match: D7FQ63_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ63_ECTSI) HSP 1 Score: 649 bits (1673), Expect = 4.990e-230 Identity = 418/506 (82.61%), Postives = 423/506 (83.60%), Query Frame = 1
Query: 1 MDEVERQAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIQAACRGTRGREETALYRXXXXXXXXXXXXXXXXXXRKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLSRXXXXXXXXXXXXXXTSLLDYELFEGEDFSWQASQDWLHDWRAEVVRSSSMLHRVNVSYNRQDPWIIIDSLRDLSHHRNLQHLDLSHNAIEVLEGLSXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLDHNYIEKAENVGSDKLASLRILRLGFNDIGNLANLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEAYRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGDDESDLPHRKQVFHKHLPEAEFTNTLPPFREPEGPPAPQHDPAEKPEIVSGSDSPEEGKFVFEDSTVFIVDPPAPTAVSREAISCVKHVMTASSYGFSRGALQ 1518
MDE+E QAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIQAACRGTRGREETALYRXXXXXXXXXXXXXXXXXXRKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSI EFPLLQTVDLSGNCISSTKPL XXXXXXXXXXXXXX IDSLRDLSHHRN XXXXXXXXXXXXXXXXXXXXXXGLPLVELHLDHNYIEKAENVGS KLASLRILRLGFNDIGNL+NLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEAYRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGD+ESDLPHRKQVFHKHLP AEFTNTLPPFREPEGPPAP+ DPAEKPE VSGSDSPEEG FVFEDSTV IVDPPAPT VSREAISCV+HVMTASSYGFS ALQ
Sbjct: 1 MDEMEGQAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIQAACRGTRGREETALYRXXXXXXXXXXXXXXXXXXRKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIAEFPLLQTVDLSGNCISSTKPLXXXXXXXXXXXXXXXXXX--------------------------------------------------IDSLRDLSHHRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLDHNYIEKAENVGSGKLASLRILRLGFNDIGNLSNLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEAYRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGDEESDLPHRKQVFHKHLPGAEFTNTLPPFREPEGPPAPEPDPAEKPETVSGSDSPEEGGFVFEDSTVSIVDPPAPTVVSREAISCVEHVMTASSYGFSSVALQ 456
BLAST of mRNA_Ecto-sp13_S_contig1869.5875.1 vs. uniprot
Match: A0A6H5KB11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB11_9PHAE) HSP 1 Score: 261 bits (667), Expect = 4.090e-81 Identity = 143/168 (85.12%), Postives = 143/168 (85.12%), Query Frame = 1
Query: 1 MDEVERQAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIQ------AACRGTRGREETALYRXXXXXXXXXXXXXXXXXXRKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLSR 486
MDEVE QAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIQ AACRGTRGREETALYR RKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLSR
Sbjct: 1 MDEVEGQAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIQLCLAFQAACRGTRGREETALYREQQAAASKIQARIRGDKARKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLSR 168
BLAST of mRNA_Ecto-sp13_S_contig1869.5875.1 vs. uniprot
Match: A0A835YJY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJY7_9STRA) HSP 1 Score: 186 bits (472), Expect = 4.490e-49 Identity = 154/376 (40.96%), Postives = 203/376 (53.99%), Query Frame = 1
Query: 283 GGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLSRXXXXXXXXXXXXXXTSLLDYELFEGED------------------FSWQASQDW--LHDWRAEVVRSSSMLHRVNVSYNRQDPWIIIDSLRDLSHHRNLQHLDLSHNAIEVLEGLSXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLDHNYIEKAENVGSDKLAS-------LRILRLGFNDIGNLANLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEAYRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGDDESDLPHRKQVFHKHLPE--AEFTNTLPPFREPEGPPAP 1323
GG LDRA +K+GLHTLGR PH LR C G G+ ++ ++ ++PLLQT+D+S N ++ PL T +LD+E+ G D + A W L DWR+ VR+ S L ++S N I ++RDLS HRNL L L+ XXXXXXXXXXXXXXXXXXXXX GLPLVEL L + + + LR L L N I L+ L+ C SLVTLD+ N +SA+RQVE+L++C L L L E YR RV+ RLQGL LLD +SP+EKV+A+NL G + SDL +R+ +F E A++ + LPP++EPE PAP
Sbjct: 136 GGTTLDRAAVKRGLHTLGRAPHSLRHCLTGCDLRGLGLRDVAALSDWPLLQTLDVSDNALTELAPLCALPFLCELHAARNGVTEVLDFEVLRGRDQTIALNAYPHVLCAANGTHARSADMPWEDLLDWRSSAVRAESALALADLSENA------IAAMRDLSPHRNLHTLLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLPLVELDLXXXXXXXXXXXAAPESGNGCAPPLLLRRLNLADNFIIELSGLQRCASLVTLDLSGNALSALRQVEWLRDCAVLRELSLARTAAAEQEWYRLRVLLRLQGLTLLDSEPVSPQEKVEALNLAGGEGSDLANRQALFRGTFQEHEAQWCDLLPPYQEPE--PAP 503
BLAST of mRNA_Ecto-sp13_S_contig1869.5875.1 vs. uniprot
Match: A0A8J2T0T5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0T5_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.010e-26 Identity = 135/478 (28.24%), Postives = 187/478 (39.12%), Query Frame = 1
Query: 13 ERQAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIQAACRGTRGREETALYRXXXXXXXXXXXXXXXXXXRKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLSRXXXXXXXXXXXXXXTSLLDYELFEGEDFSWQASQDWLHDWRAEVVRSSSMLHRVNVSYNRQDPWIIIDSLRDLSHHRNLQHLDLSHNAIEVLEGLSXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLDHNYIEKAENVGSDKLASLRILRLGFNDIGNLANLKTCLSLVTLDV---------------------------------------------RFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEAYRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGDDESDLPHRKQVFHKHLPEA-EFTNTLPPFREPE 1308
E AA R+QA+ RG R R V R T + EREQA +Q RG E R R+ R G L+R DI +GLHTLGR DL+ Y+G + + +I+ + + LQ +D+S N ++S PL + + S + L + ++ R P +L NL +DLS N IEVL S L + LD N + E G L+ L+IL + ND+ ++ +LV LDV R N + VR+VE+L+ +L+L+GNP L YR RV+FRLQ L +LD +S ++K+KAVNL G DESDL HR++ F KH A EF + LPPF EPE
Sbjct: 9 EEDAATRLQAISRGH--------RDRQAVERTQTLKKEREQAASLLQTRQRGRIACREVDERREQTQAATSIGRIYRGKVTRRA--RVDRGPRSLERDDIAQGLHTLGRTA-DLKHAYLGCSVSGLQLVDIDVLQSYEHLQALDVSCNNLTSLSPLEHLP-------------------------------------YLTRLNASGNKLSQFDLEIPRNVPGEKAWTLGRKHAGSNLIEVDLSDNDIEVLGEQSTHRR---------------------LEKFVLDGNRMY--EITGLQNLSRLKILSMRNNDLSYVSXXXXXSALVELDVGGNRLTTMGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDNCIEKVREVEFLERLPLFSSLLLQGNPCSDLPFYRRRVVFRLQQLRVLDGIAVSSDDKIKAVNLHGGDESDLKHRRETFRKHFGSALEFEDPLPPFVEPE 415
BLAST of mRNA_Ecto-sp13_S_contig1869.5875.1 vs. uniprot
Match: A0A3F2RVW1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVW1_9STRA) HSP 1 Score: 104 bits (259), Expect = 7.900e-21 Identity = 95/344 (27.62%), Postives = 153/344 (44.48%), Query Frame = 1
Query: 310 IKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLSRXXXXXXXXXXXXXXTSLLDYELFE-GEDFSWQASQDWLHDW-RAEVVRSSSMLHRVNVSYNRQDPWI--------IIDSLRDLSHHRNLQHLDLSHNAIEVLEGLSXXXXXXXXXXXXXXXXXXXXXXGLPLVE-LHLDHNYIEKAENVGSDKLASLRILRLGFNDIGNLANLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEA----YRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGDDESDLPHRKQVFHKHLPEAEFTNTLPPF 1296
+ K L LGRNP Y + +S+I I EFP +Q + + N + + PL T +LD+++ + D +W W+ R + + ++ + P++ I+ + +S R L+ LDLSHN + + GL GL +E L L HN + ++ G L L L + N + L++L C+ L L++ +N+V+ + ++ L ++L L L G P+ ++ YRARVI RL L LD ++ +EKVKA+ + G SDL R+QV K+LP EF N LPP
Sbjct: 2 VSKRLGVLGRNPFTQAHIYTTATLTDLRLSDIEVIREFPHIQHLVCNQNELKTLDPLKHIPLLLTLDAEENQLTEVLDFQVPKCTPDNAWVDGARWIGSLLRKATLNRNRIVSMPTHELSTTHPFLQELHLAFNTIEEISGVSQLRFLRVLDLSHNRLSSIRGL---------------VANEDSSHGLQALETLLLSHNQLTAIDD-GVAFLPRLTHLDVAHNQLKTLSSLGECVQLQRLELAYNRVADINELNCLANLRYLGQLSLGGCPLVEIQVSLIFYRARVIRRLLQLQKLDDETVTSKEKVKALVMHG---SDLDARRQVAAKYLPGQEFANFLPPL 326
BLAST of mRNA_Ecto-sp13_S_contig1869.5875.1 vs. uniprot
Match: A0A3R7K2Y1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K2Y1_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.930e-19 Identity = 93/341 (27.27%), Postives = 151/341 (44.28%), Query Frame = 1
Query: 310 IKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLSRXXXXXXXXXXXXXXTSLLDYELFE-GEDFSWQASQDWLHDW-RAEVVRSSSMLHRVNVSYNRQDPWI--------IIDSLRDLSHHRNLQHLDLSHNAIEVLEGLSXXXXXXXXXXXXXXXXXXXXXXGLPLVE-LHLDHNYIEKAENVGSDKLASLRILRLGFNDIGNLANLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEA----YRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGDDESDLPHRKQVFHKHLPEAEFTNTL 1287
+ K L LGRNP Y + +S+I I EFP +Q + + N + + PL T +LD+++ + D +W W+ R + + ++ + P++ I+ + +S R L+ LDLSHN + + GL GL +E L L HN + ++ G L L L + N + L++L C+ L L++ +N+V+ + ++ L ++L L L G P+ ++ YRARVI RL L LD ++ +EKVKA+ + G SDL R+QV K+LP EF N L
Sbjct: 2 VSKRLGVLGRNPFTQAHIYTTATLTDLRLSDIEVIREFPHIQHLVCNQNELKTLDPLKHIPLLLTLDAEENQLTEVLDFQVPKCTPDNAWVDGARWIGSLLRKATLNRNRIVSMPTHELSTTHPFLQELHLAFNTIEEISGVSQLRFLRVLDLSHNRLSSIRGL---------------VANEDSSRGLQALETLLLSHNQLTVIDD-GVAFLPRLTHLDVAHNQLKTLSSLGECVQLQRLELAYNRVADINELNCLANLRYLGQLSLGGCPLVEIQVSLIFYRARVIRRLLQLQKLDDEIVTSKEKVKALVMHG---SDLDARRQVAAKYLPGQEFANFL 323
BLAST of mRNA_Ecto-sp13_S_contig1869.5875.1 vs. uniprot
Match: A0A7S2BD69_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BD69_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.590e-16 Identity = 63/165 (38.18%), Postives = 82/165 (49.70%), Query Frame = 1
Query: 841 GLPLVELHLDHNYIEKAENVGSDKLASLRILRLGFNDIGNLANLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRL---------EAYRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGDDESDLPHRKQVFHKHLPEAEFTNTLPPFREPE 1308
GLPL EL LD+N I+ EN+ +K+ L AVR+VEY+Q L +LVL GNP+ + YR RV+ RLQGL LD + EEK KA+NL G D SD+ +R +VF K P+ E++NTLP F E E
Sbjct: 10 GLPLTELALDNNKIKFIENL--EKVPCLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVREVEYVQNLPLLCSLVLTGNPVAPVVIPEDPSLPNFYRLRVLVRLQGLTSLDGKLATAEEKTKAMNLHGGDNSDVLNRARVFKKVFPDMEYSNTLPCFVETE 172
BLAST of mRNA_Ecto-sp13_S_contig1869.5875.1 vs. uniprot
Match: A0A5D6YMV9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMV9_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 5.160e-16 Identity = 109/347 (31.41%), Postives = 158/347 (45.53%), Query Frame = 1
Query: 295 LDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTKPLSRXXXXXXXXXXXXXXTSLLDYELFE-GEDFSWQASQDWLHDWRAEVVRSSSMLHRVNVSYNRQDPWIIIDSLRDLSH-HRNLQHLDLSHNAIEVLEGLSXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLDHNYIEKAENVGSDKLASLRILRLGFND------------IGNLANLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEA--YRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGDDESDLPHRKQVFHKHLPEAEFTNTL 1287
L RA ++ L LGRNP + +++I+++ EFP LQ V S N I++ PL+ T +LD++ +W W+ S+L R ++S NR I+ +RDLS H+ LQ L+L+HN I ++G+S XXXXXXXXXXXXXXXXXXX N+ L + V +N + V ++ +L +FL+ L+L G P+ E YRARV+ RLQ L +LD + +S EKVKA+ + G SD+ R++VF KHLP +F N L
Sbjct: 213 LTRALVEPRLGVLGRNPFTQAHVFTTATLLGLHLADIDALAEFPHLQHVRCSSNEITTLAPLANLPLLLSVDASNNQLTKVLDFDTPACTPSHAWVNGDTWI----------GSLLRRADLSENR------IERIRDLSSAHQFLQELNLAHNEITEIDGVSQLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNMTQLHSIGRXXXXXVSYNDIEDVNELNHLMPLRFLNQLMLAGAPIVEREGSFYRARVLRRLQQLAVLDSDAVSAREKVKALVMHG---SDVAARQRVFAKHLPGQQFINYL 540
BLAST of mRNA_Ecto-sp13_S_contig1869.5875.1 vs. uniprot
Match: UPI001E666DA2 (leucine-rich repeat and guanylate kinase domain-containing protein-like n=1 Tax=Salmo salar TaxID=8030 RepID=UPI001E666DA2) HSP 1 Score: 77.8 bits (190), Expect = 3.520e-13 Identity = 57/185 (30.81%), Postives = 89/185 (48.11%), Query Frame = 1
Query: 631 SMLHRVNVSYNRQDPWIIIDSLRDLSHHRNLQHLDLSHNAIEVLEGLSXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLDHNYIEKAENVGSDKLASLRILRLGFNDIGNLANLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEAYRARVIFRLQGLMLLDRNKISPEEK 1185
S L ++N+ YN + L H +L HL L+HN I + GL LP+ +L L N IEK ENV + L +L++L L N I +L+ L+ L ++++ N +S +++ ++ + L L L+ NP+ YR VIF LQ L LD+ K++ EEK
Sbjct: 11 SSLSKLNLDYN------CFSEIGGLLHCASLTHLSLAHNKISCISGLDK----------------------LPIKDLCLRGNQIEKIENV--ETLRTLQVLDLSLNRITSLSGLQNLHLLGSINLESNLISEIKEATHIHDLCLLRELNLQRNPVQEQLDYRLAVIFLLQHLTGLDQEKVTVEEK 165
BLAST of mRNA_Ecto-sp13_S_contig1869.5875.1 vs. uniprot
Match: A0A4V1IT65_9FUNG (Outer arm dynein light chain 1 (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4V1IT65_9FUNG) HSP 1 Score: 63.5 bits (153), Expect = 1.120e-7 Identity = 42/110 (38.18%), Postives = 64/110 (58.18%), Query Frame = 1
Query: 865 LDHNYIEKAENVGSDKLASLRILRLGFNDIGNLANLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEAYRARVIFRLQGLMLLDRNKISPEEKVKA 1194
L +N I + ENVG KL LR L+L N+I ++ NL+ +L LD+ N V +E L++ L L L GNP+++L+ YRA I L L +LD +I+ E+++A
Sbjct: 52 LQNNQIGRIENVG--KLKGLRYLQLALNNIRHIENLQHNEALEKLDLTVNFVENPLDLENLKDNYRLRELYLVGNPVNKLDGYRAFAIHTLPQLRVLDGVEITRTERLEA 159 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1869.5875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1869.5875.1 >prot_Ecto-sp13_S_contig1869.5875.1 ID=prot_Ecto-sp13_S_contig1869.5875.1|Name=mRNA_Ecto-sp13_S_contig1869.5875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=507bp MDEVERQAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIback to top mRNA from alignment at Ecto-sp13_S_contig1869:3844..7982- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1869.5875.1 ID=mRNA_Ecto-sp13_S_contig1869.5875.1|Name=mRNA_Ecto-sp13_S_contig1869.5875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4139bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1869:3844..7982- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1869:3844..7982- >mRNA_Ecto-sp13_S_contig1869.5875.1 ID=mRNA_Ecto-sp13_S_contig1869.5875.1|Name=mRNA_Ecto-sp13_S_contig1869.5875.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1521bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1869:3844..7982- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |