mRNA_Ecto-sp13_S_contig1855.5799.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig1855.5799.1
Unique Name	mRNA_Ecto-sp13_S_contig1855.5799.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1855.5799.1 vs. uniprot
Match: A0A6H5L4H0_9PHAE (Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H0_9PHAE)

HSP 1 Score: 828 bits (2138), Expect = 1.080e-282
Identity = 824/973 (84.69%), Postives = 837/973 (86.02%), Query Frame = 3

Query:   54 VTFAQMDTVALPPSVVSSPRRIRVVFTADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLTRQLKQRKGKKARSSSLVLTLDGFVLPPTESLDVLRETDVVTLTLQQSDGREHGRTAISGSSXXXXXXXXXXXXXXXXXXXXXS-KKRGGKEGSVSGVGNKAGGKKRGAPAVGAAACRKRSRTGSPAVESSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLPADIPARGAESTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKETKGAKENAKGKRTPTLSAGGTAGGRGDVGGMRGVGNATPNLVPSGRGAGXXXXXXXGGIGGGQQHWGGPLGRIVGQLRRPEGESESKLGGAAAATAPLEPEGRAGGRGGSTARGGVFGPGRGIGRGGMGMTRGGGFAGGGYADRNTRRHSTGDSANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPASIEDDKRDGGGSGSGALVNGCTKGHTAGQQQQGSSSSIAESNAEEGSVPTSNGHNEGGASGDSKGMEDPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARSTSSGEVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELKKRKQALQKWNSLGPGGGILGGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAGRGGRXXXXXXXXXXXXGSARKQGVKGKGASPKSXXXXXXXXXXXXXXXXXXXXXXXXLPTGGGRGATAKATAPSSAV 2969
            V F +MDTVALPP+V SSPRRIRVVF ADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLTRQLK+RKG+KARSSSLVLTLDGFVLPPTESLDVLRETDVVTLTL+QSDGREHGRTAISG+S  XXXXXXX            + KKRGG+EGSVSGVGNKAGGKKRGAPAVGAAA RKRSRTGSPAVESSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       KLPADIPARGAES  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AKE KGAKENAKG                         NATPNLVPSGRGAGXXXXXXX    GGQQHWGGPLGRIVGQLRRPEGESES  GGAAAATAPLEPEGRAG        GGVFGPG      GMGMTRGGGFAGG YADRNTRRHSTG +ANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPAS EDD +DGGG+GSGA VN CTKGHT GQQQQGSSS IAESN EEGSVPTSNGHNEGG  GDSKGME PAA   XXXXXXXXXXXXXXXXXXXXXXXXXXX             KARSTSSGEVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELKKRKQALQKWNSLGPGGGILGGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KKAGRGG+XXXXXXXXXXXXGSARKQG KG  ASPKS                        LPTGGGRGA  + TAPSSAV
Sbjct:   49 VIFVKMDTVALPPAVASSPRRIRVVFKADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLTRQLKRRKGRKARSSSLVLTLDGFVLPPTESLDVLRETDVVTLTLRQSDGREHGRTAISGNSTTXXXXXXXGAGKAKTNQKAKAPKKRGGREGSVSGVGNKAGGKKRGAPAVGAAAGRKRSRTGSPAVESSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------KLPADIPARGAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKEPKGAKENAKG-------------------------NATPNLVPSGRGAGXXXXXXXXXXXGGQQHWGGPLGRIVGQLRRPEGESESNGGGAAAATAPLEPEGRAGXXXXXXXVGGVFGPGXXXXXXGMGMTRGGGFAGGRYADRNTRRHSTGHTANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPASTEDDNKDGGGAGSGAFVNDCTKGHTVGQQQQGSSSIIAESNTEEGSVPTSNGHNEGGFGGDSKGMEYPAAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSAEPTTDGRNKARSTSSGEVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELKKRKQALQKWNSLGPGGGILGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KKAGRGGKXXXXXXXXXXXXGSARKQGGKGXXASPKSVGKKQGAARGTLAVAGLLGKCAGKLPTGGGRGAAEEGTAPSSAV 988

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1855.5799.1 vs. uniprot
Match: D7FZW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW0_ECTSI)

HSP 1 Score: 609 bits (1570), Expect = 3.040e-204
Identity = 443/528 (83.90%), Postives = 452/528 (85.61%), Query Frame = 3

Query: 1392 MRGVGNATPNLVPSGRGAGXXXXXXXGGIG--GGQQHWGGPLGRIVGQLRRPEGESESKLGGAAAATAPLEPEGRAGGRGGSTARGGVFGPGRGIGRGGMGMTRGGGFAGGGYADRNTRRHSTGDSANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPASIEDDKRDGGGSGSGALVNGCTKGHTAGQQQQGSSSSIAESNAEEGSVPTSNGHNEGGASGDSKGMEDPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARSTSSGEVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELKKRKQALQKWNSLGPGGGILGGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAGRGGRXXXXXXXXXXXXGSARKQGVKGKGASPKSXXXXXXXXXXXXXXXXXXXXXXXXLPTGGGRGATAKATAPSSAV 2969
            MRGVGNATPNLVPSGRGAGXXXXXXX      GGQQHWGGPLGRIVGQLRRPEGESES  GGAAAA APLEPEGRAGGRG STARGGVFGPGRGIGRGGMGMTRGGG AGGGYA++NTRRHSTGD+ANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVEN DARYV YEELPTDMRPQV DVLAFKTLSLNEETWTPELSPYR AEV AFD SSGLVRL PASIEDD +DG       LVNGCTKGHTAGQQQQGSSS I ESN EEG VPTSNGHN+GG SG+SKGMEDPAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KARSTSSG+VGGAEEDRELREGEEELEYSSLANVRVVRGPSMGEL+KRKQAL KWNSLGPGGGILGG  XXXXXXXXXXXXXXXXXXXXXX         KKAGRGGRXXXXXXXXXX  GSARKQG KGKGASPKS                        LPTGGG GA  +ATAPSSAV
Sbjct:    1 MRGVGNATPNLVPSGRGAGXXXXXXXXXXXXXGGQQHWGGPLGRIVGQLRRPEGESESNGGGAAAAIAPLEPEGRAGGRGDSTARGGVFGPGRGIGRGGMGMTRGGGAAGGGYANKNTRRHSTGDTANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENGDARYVVYEELPTDMRPQVCDVLAFKTLSLNEETWTPELSPYRTAEVTAFDTSSGLVRLLPASIEDDNKDGXXXXXXXLVNGCTKGHTAGQQQQGSSSGITESNTEEGRVPTSNGHNQGGVSGNSKGMEDPAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKARSTSSGKVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELEKRKQALHKWNSLGPGGGILGGXXXXXXXXXXXXXXXXXXXXXXXXPASLPSATPKKAGRGGRXXXXXXXXXXACGSARKQGGKGKGASPKSVGKKQGAARGTLAVAGLLGKCAGKLPTGGGGGAAGEATAPSSAV 528

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1855.5799.1 vs. uniprot
Match: A0A0P0Y9A7_ORYSJ (Coilin n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0Y9A7_ORYSJ)

HSP 1 Score: 55.1 bits (131), Expect = 1.530e-5
Identity = 28/83 (33.73%), Postives = 49/83 (59.04%), Query Frame = 3

Query:  114 RIRVVFTADAGCVPSSNPTLTKR-WIFIPPRLTVIGDLAHHLTRQLKQRKGKKARSSSLVLTLDGFVLPPTESLDVLRETDVV 359
            R+R+VF        S   +  +R W+ +PP L+ + DLA H+  + + R+   +  S ++L++DGFVLPP ES  + R+ D++
Sbjct:   10 RLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARFRLRR---SCPSCVILSIDGFVLPPFESTCIFRDNDII 89

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1855.5799.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1855.5799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5L4H0_9PHAE	1.080e-282	84.69	Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=8...	[more]
D7FZW0_ECTSI	3.040e-204	83.90	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A0P0Y9A7_ORYSJ	1.530e-5	33.73	Coilin n=1 Tax=Oryza sativa subsp. japonica TaxID=...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1855	contig	Ecto-sp13_S_contig1855:8986..14267 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	3422
Hectar predicted targeting category	other localisation
Exons	4
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-22_003890.1
Cds size	2940

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1855.5799.1	prot_Ecto-sp13_S_contig1855.5799.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig1855 9018..13817 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462952.407967-UTR-Ecto-sp13_S_contig1855:8985..9017	1681462952.407967-UTR-Ecto-sp13_S_contig1855:8985..9017	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig1855 8986..9017 +
1681462952.4592137-UTR-Ecto-sp13_S_contig1855:13817..14267	1681462952.4592137-UTR-Ecto-sp13_S_contig1855:13817..14267	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig1855 13818..14267 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462952.4178953-CDS-Ecto-sp13_S_contig1855:9017..10145	1681462952.4178953-CDS-Ecto-sp13_S_contig1855:9017..10145	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1855 9018..10145 +
1681462952.428925-CDS-Ecto-sp13_S_contig1855:10849..11598	1681462952.428925-CDS-Ecto-sp13_S_contig1855:10849..11598	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1855 10850..11598 +
1681462952.437157-CDS-Ecto-sp13_S_contig1855:11838..11965	1681462952.437157-CDS-Ecto-sp13_S_contig1855:11838..11965	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1855 11839..11965 +
1681462952.4494028-CDS-Ecto-sp13_S_contig1855:12881..13817	1681462952.4494028-CDS-Ecto-sp13_S_contig1855:12881..13817	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1855 12882..13817 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig1855:8986..14267+
coding sequence from alignment at Ecto-sp13_S_contig1855:8986..14267+

protein sequence of mRNA_Ecto-sp13_S_contig1855.5799.1

>prot_Ecto-sp13_S_contig1855.5799.1 ID=prot_Ecto-sp13_S_contig1855.5799.1|Name=mRNA_Ecto-sp13_S_contig1855.5799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=980bp
MSVASTSVTFAQMDTVALPPSVVSSPRRIRVVFTADAGCVPSSNPTLTKR
WIFIPPRLTVIGDLAHHLTRQLKQRKGKKARSSSLVLTLDGFVLPPTESL
DVLRETDVVTLTLQQSDGREHGRTAISGSSSATTTTTTGAGATKNKQKAS
ASKKRGGKEGSVSGVGNKAGGKKRGAPAVGAAACRKRSRTGSPAVESSAS
SGKRRKVGSSSTAEKAKKAARKRTKGKGADSAAATQDSSSSDGDSSSCGE
SAPAKRGGRAAAGGKGATTVAAKKAGELTAATVYPAGGGEEAVAMSSTKR
KKKQKLPADIPARGAESTSSSSSDESSSSSSSSSSSTSSSSSSSSSSSGS
EDEESDSEEEEEEAEVKKTTSRKTKEVKLNAVAAAAAAGDGDDSSSSSSS
SSGSDSSDSDESSSPDEEEKAKETKGAKENAKGKRTPTLSAGGTAGGRGD
VGGMRGVGNATPNLVPSGRGAGGRGRVGGGGIGGGQQHWGGPLGRIVGQL
RRPEGESESKLGGAAAATAPLEPEGRAGGRGGSTARGGVFGPGRGIGRGG
MGMTRGGGFAGGGYADRNTRRHSTGDSANGDGGSAKKRGRGGWKKDYEVI
ASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTL
SLNEETWTPELSPYRMAEVIAFDASSGLVRLRPASIEDDKRDGGGSGSGA
LVNGCTKGHTAGQQQQGSSSSIAESNAEEGSVPTSNGHNEGGASGDSKGM
EDPAAVAGSTGGGSVSRKEEEESGSVAQQPEEPAAAGASPEPTTDGGNKA
RSTSSGEVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELKKRKQAL
QKWNSLGPGGGILGGSAAGNNINNSNNNSNTDVDSAAASPASLPSATPKK
AGRGGRGRGRGRGGGGAGGSARKQGVKGKGASPKSVGKKQGAARGTLAVA
GLLGKCAGKLPTGGGRGATAKATAPSSAV*

mRNA from alignment at Ecto-sp13_S_contig1855:8986..14267+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig1855.5799.1 ID=mRNA_Ecto-sp13_S_contig1855.5799.1|Name=mRNA_Ecto-sp13_S_contig1855.5799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5282bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1855:8986..14267+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGACTTGCTGCTCCACTCTCTCTGATGTGTGATGAGCGTAGCGTCTACA
TCAGTGACATTCGCACAAATGGATACCGTGGCTCTTCCCCCCTCGGTGGT
ATCCTCCCCACGTCGGATCCGAGTGGTCTTTACAGCAGATGCGGGGTGCG
TTCCGAGCTCAAACCCCACCCTCACCAAGCGGTGGATATTCATCCCTCCC
CGTCTCACCGTCATCGGTGACCTGGCACACCACCTCACGCGGCAGCTCAA
GCAGAGGAAGGGAAAGAAGGCGCGTTCTTCTTCCCTCGTGCTCACCCTAG
ATGGGTTCGTGCTGCCCCCGACCGAAAGCCTGGATGTCCTGCGCGAAACC
GACGTCGTCACGCTCACCCTTCAGCAGAGCGACGGACGAGAGCACGGCCG
TACAGCCATCTCTGGCAGCAGCAGCGCTACCACCACCACCACCACTGGCG
CCGGCGCGACAAAAAATAAACAAAAGGCAAGTGCGTCGAAAAAGAGAGGT
GGCAAAGAGGGATCTGTGAGCGGTGTCGGGAATAAGGCGGGAGGCAAGAA
ACGAGGAGCACCTGCCGTTGGTGCTGCCGCATGCAGGAAGCGGTCCCGCA
CTGGCTCTCCCGCCGTGGAGAGTAGCGCCTCGTCGGGAAAGAGGCGGAAG
GTCGGTTCTTCCTCCACAGCAGAGAAGGCCAAGAAGGCGGCGAGGAAGAG
AACGAAGGGAAAGGGCGCCGATTCGGCGGCAGCTACGCAGGATTCCTCTT
CCTCCGATGGCGATTCTTCCTCTTGTGGTGAGAGCGCTCCAGCGAAGCGT
GGGGGCCGTGCTGCTGCTGGCGGCAAGGGTGCGACTACTGTCGCCGCTAA
GAAAGCCGGCGAGCTCACAGCAGCAACGGTCTACCCCGCGGGTGGAGGGG
AGGAGGCAGTGGCAATGTCGTCGACCAAGAGGAAGAAGAAGCAAAAGCTA
CCGGCGGACATCCCTGCTCGCGGTGCCGAGTCCACCTCCTCGTCTTCGTC
AGACGAGTCTTCGTCGTCATCATCGTCCAGCAGCAGCAGCACTTCGTCAT
CCTCGTCCTCCAGTAGCAGCAGCAGCGGCAGCGAAGACGAAGAAAGCGAC
AGCGAGGAGGAAGAAGAGGAAGCTGAGGTGAAGAAGACGACAAGCCGCAA
GACGAAGGAGGTACAGGACTTGCGTCTCGAGTGGGAAGCCTTTTATTCCA
ATTAGATTCGAGTAGTGGAACCAGGCTAAGTAGGCGACAAGTGAAAATTG
TAGGGACACCTGATCAAGTGGAGAGCCTTCTGCTGTAGACGCGATGTGTG
CAACGATCCGCTCTGGACATGATTGTCTGCGACAGAAGCGTTCTGCTGAG
TGTATCCCAGCTTCTGAAATATCAAGTTGTCAAATGTCGTGACCCACATC
GGACGTGTGTCGCGCTTTGCAGCAATATTTTGGCCAACTAATCACGCTCG
TTGTACCCAGAGTTAATTCTCGTTGTAGCGGATTCGTCTGTTCACACAAG
GAAAGGGCGCTGCGTCGGCGACCCCCACATAGTGCGAAGTGAATTTCGTC
CTGATGCCACGTCTCACTCGCCGCACACCTCTGGAGATTGGTGTCGTTTC
CACCAGATGGTCCTGTCTATAGCCATCTCAACGATGGAGGGTACGTGAGT
CATGATTAAATTTGGATCAACGTTCCGTTTCCAAGTGCCTAGATGGATCG
CCAGGTCTCCAGTAAATTTTAGAATTCGGTCTAGGAAACAATGAAAGAAC
ACACTAAATTCACGCGCCCTGTTAACGTCGAATCCCACATGAGGTTATCT
AATCTCGGGATTTACACCCCCTAGTCTCGTTCGTGCTTCCTCTACATGGC
ATACTTTCGGGCAGGTGAAACTCAATGCTGTCGCCGCCGCAGCAGCAGCA
GGAGATGGCGACGACAGCAGCAGCAGCAGCAGCAGCAGCAGCGGTAGTGA
TAGCAGCGACAGCGATGAGTCGTCATCGCCTGACGAGGAGGAGAAGGCAA
AGGAGACAAAAGGTGCAAAAGAAAACGCCAAGGGGAAGCGAACACCGACC
CTGTCTGCGGGAGGGACCGCCGGTGGCCGCGGCGACGTAGGGGGCATGCG
CGGTGTAGGTAATGCCACCCCCAACTTGGTGCCCTCAGGCAGGGGGGCGG
GGGGTAGAGGTAGGGTCGGCGGCGGCGGAATTGGGGGCGGCCAGCAACAC
TGGGGAGGGCCGCTGGGTCGAATCGTGGGACAACTCAGGAGACCGGAGGG
AGAGAGCGAGAGCAAACTTGGCGGTGCTGCAGCCGCAACAGCACCGTTAG
AACCGGAAGGCCGTGCTGGTGGTCGTGGGGGTTCCACAGCTAGAGGGGGC
GTGTTCGGCCCCGGCAGAGGCATTGGGCGCGGGGGCATGGGGATGACGAG
GGGGGGCGGGTTTGCCGGCGGGGGGTACGCGGACAGGAACACCCGGCGGC
ATAGTACCGGCGACAGCGCGAACGGTGACGGCGGTAGCGCGAAGAAGAGG
GGGAGGGGGGGTTGGAAGAAGGACTACGAGGTGATCGCGTCGGTGGAGAG
CAAGGCTGGGGAAGCGGCGGCGGAGGCAGCAGCTGCTGGATCGGTTGAGA
ACGCCGACGCTCGGTGAGAATAATTATAAGATTATAAGGAGGTTTGTGTT
CTTGTGCTTCATTGTGCTGCTGTTGTTGTTCGTCGTCCAGGTACGCCATG
TTTGTCGACTCACGTGACTGCCTTTGACGAAGCTTGGAACCATTGAAAAC
ATGCGAACCAGCGCAATGTATGGTTGCTCATCCTCGCTTCGTGTGACTTG
TTCTGACTCGTCCCCGCTCCCCCGCCCCTCCTCTGCCAATTTTCTGCGCC
CAGGTACGTCGGCTATGAAGAGCTCCCCACAGACATGCGTCCGCAAGTGC
GCGACGTCCTCGCGTTTAAGACGCTTTCCCTCAACGAGGAGACGTGGACA
CCCGAGCTCTCGCCATACCGGATGGCGGAGGTGAGGTCCACTTGTCGCGG
TGGTATGTCTGCCCGTGCTGCCTCGTTTTTTTAATGTCTTGGGTTCCCAT
CCGCTCGACGTCTTGGCCTGTTCTGTCTCGCAGTAGGCGTCGAGCTTAAG
GTGTTTGCGGTGCCCGGGGGAATGCGCTCCCAAGACGTCTGGTTGCTTTC
ACTGCTGTCGCTGTTTCTTGGAAATTAAGAATTTTTCCTTGCGCCTTCTT
GGTCTGCTGTTGGGCTGCCCTTTCGCCGTTGCTGATTCCACTTTTTGCGT
ACAAGCTCCGGTTGGATTCCGACCGAGTGACAGGGTGCTGTTGTTGGTGG
TGGTGCTGTTGGCTTGGGTGCACGAGGTGTTTCGCGCTCGGCGCCTCCGA
CATCCCGGATCCGCATCGCCTTTGGTTTCTGAGCAAACTTCTTTAGGACT
AGGGTACGAACAGCGCAGCTTTAAAAGCACCGCGAGCTATGGCAAGGCGA
CGGGCTTTCAAGTCTGTCTTTCGTGTCGTCGTTCGCTCCCCAACCAATCA
GGTCTCTTCTCGTAGAAAATGACATCTTTCGAATAATTGGTGGTGCATTC
CGTTGGCCTGCCCGAAGTGGGGTATTGCTATTGGCTCTGACCGAACTGCT
GTATCTGTCGAGAAACGATGGCTATGTTTGGACCGGGGCATGGATGGCTT
TCGTCTGGGATGTTGACGGGCGCCCGGGCAACTTGCGTCAACGGTACTGA
AGCCGGAAATCAGTGGATGAAAACATCGACGTGCGCTGGGCAAACGATAT
ACTCAACAACACAAATGTGTTGGATCGAGCGACCGATCACAACTATCTTT
CTAACCTCCACCGCTTGTCCGTCCCCTCTTTTACCTTCTCACGTCCTTCG
CCCCCCCCCTATCAAACGGCGGCGGCGGTGTCACATTCCTTTTCAGGTGA
TTGCCTTCGACGCATCCTCGGGGCTTGTACGATTGCGTCCTGCGTCGATA
GAGGATGACAAAAGGGATGGCGGAGGTAGCGGTAGCGGCGCTCTCGTGAA
CGGTTGCACGAAGGGCCACACAGCCGGCCAACAGCAACAGGGCAGCAGTA
GCAGCATTGCTGAGTCCAACGCCGAGGAGGGGAGCGTACCGACAAGCAAT
GGGCACAACGAAGGTGGAGCTAGTGGCGACTCGAAGGGCATGGAAGACCC
AGCGGCGGTAGCAGGTAGTACAGGTGGTGGTTCGGTTAGTCGGAAGGAAG
AAGAGGAGAGCGGCAGTGTTGCGCAACAGCCTGAGGAACCCGCTGCCGCT
GGGGCTTCGCCGGAACCAACAACGGACGGAGGAAACAAAGCCAGGAGTAC
CAGCAGCGGGGAGGTCGGCGGAGCGGAGGAAGACCGGGAGTTGCGCGAAG
GCGAGGAAGAGCTCGAGTACAGCTCTCTCGCGAACGTCCGCGTCGTGCGA
GGACCCTCGATGGGCGAGCTGAAGAAGCGCAAGCAAGCCCTCCAGAAGTG
GAACTCCCTCGGTCCCGGGGGCGGTATTCTAGGGGGATCGGCGGCTGGGA
ACAATATCAACAATAGCAACAATAACAGCAACACAGATGTTGACAGCGCT
GCTGCTTCCCCGGCGTCGCTGCCCTCGGCTACCCCCAAGAAGGCGGGAAG
GGGGGGGAGGGGACGGGGTAGGGGAAGAGGAGGTGGAGGCGCTGGTGGTT
CTGCTAGAAAGCAGGGCGTGAAGGGTAAAGGGGCGTCGCCGAAGAGCGTG
GGGAAGAAGCAGGGGGCAGCACGGGGGACCCTAGCGGTCGCAGGGCTGCT
GGGAAAGTGTGCGGGAAAGCTACCGACGGGTGGAGGGAGAGGGGCTACAG
CGAAGGCCACCGCTCCTTCGTCCGCGGTGTAAATGTTTTTTTTCATGTAC
GTTTCACGGCGTTTTTGTACCGTTTTTTGCGGTTGTTTTCGAGCAGCAGG
AAAGGAATGTTTGTGGGTTGGCTTTCTGTCTTTGGTGGCTGGGCCTTGTG
AGGCATGATCTGTGGGGTGCGATTTTATGGTTCGGTGCTGCTATTCTGGT
TGTTACGTTTGAGCAGCACAATGGCTCTTGCTGTTGCGCAGGGCTGGAGG
AAGTTGACGGGCGGGTGTTGTTTGTGTTGTGTCGTCCGCTGCTTTTGCCG
ACGATCCCTCCGTCATGCGACCGGTGTGATTCTGATTATGGCGCAATGCG
TGGTCATGGGATAGTCCTTCGTGTGAAGAAGGCCACCACATTATGCAAGG
CAATTTGTACGCATCGCAGCAGTTTGCTAAAACATAACATCCCATATGGT
ATGTATGCAAATGTTTCATGGGTGTTTCCGCC

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1855:8986..14267+

>mRNA_Ecto-sp13_S_contig1855.5799.1 ID=mRNA_Ecto-sp13_S_contig1855.5799.1|Name=mRNA_Ecto-sp13_S_contig1855.5799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2940bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1855:8986..14267+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCGTAGCGTCTACATCAGTGACATTCGCACAAATGGATACCGTGGC
TCTTCCCCCCTCGGTGGTATCCTCCCCACGTCGGATCCGAGTGGTCTTTA
CAGCAGATGCGGGGTGCGTTCCGAGCTCAAACCCCACCCTCACCAAGCGG
TGGATATTCATCCCTCCCCGTCTCACCGTCATCGGTGACCTGGCACACCA
CCTCACGCGGCAGCTCAAGCAGAGGAAGGGAAAGAAGGCGCGTTCTTCTT
CCCTCGTGCTCACCCTAGATGGGTTCGTGCTGCCCCCGACCGAAAGCCTG
GATGTCCTGCGCGAAACCGACGTCGTCACGCTCACCCTTCAGCAGAGCGA
CGGACGAGAGCACGGCCGTACAGCCATCTCTGGCAGCAGCAGCGCTACCA
CCACCACCACCACTGGCGCCGGCGCGACAAAAAATAAACAAAAGGCAAGT
GCGTCGAAAAAGAGAGGTGGCAAAGAGGGATCTGTGAGCGGTGTCGGGAA
TAAGGCGGGAGGCAAGAAACGAGGAGCACCTGCCGTTGGTGCTGCCGCAT
GCAGGAAGCGGTCCCGCACTGGCTCTCCCGCCGTGGAGAGTAGCGCCTCG
TCGGGAAAGAGGCGGAAGGTCGGTTCTTCCTCCACAGCAGAGAAGGCCAA
GAAGGCGGCGAGGAAGAGAACGAAGGGAAAGGGCGCCGATTCGGCGGCAG
CTACGCAGGATTCCTCTTCCTCCGATGGCGATTCTTCCTCTTGTGGTGAG
AGCGCTCCAGCGAAGCGTGGGGGCCGTGCTGCTGCTGGCGGCAAGGGTGC
GACTACTGTCGCCGCTAAGAAAGCCGGCGAGCTCACAGCAGCAACGGTCT
ACCCCGCGGGTGGAGGGGAGGAGGCAGTGGCAATGTCGTCGACCAAGAGG
AAGAAGAAGCAAAAGCTACCGGCGGACATCCCTGCTCGCGGTGCCGAGTC
CACCTCCTCGTCTTCGTCAGACGAGTCTTCGTCGTCATCATCGTCCAGCA
GCAGCAGCACTTCGTCATCCTCGTCCTCCAGTAGCAGCAGCAGCGGCAGC
GAAGACGAAGAAAGCGACAGCGAGGAGGAAGAAGAGGAAGCTGAGGTGAA
GAAGACGACAAGCCGCAAGACGAAGGAGGTGAAACTCAATGCTGTCGCCG
CCGCAGCAGCAGCAGGAGATGGCGACGACAGCAGCAGCAGCAGCAGCAGC
AGCAGCGGTAGTGATAGCAGCGACAGCGATGAGTCGTCATCGCCTGACGA
GGAGGAGAAGGCAAAGGAGACAAAAGGTGCAAAAGAAAACGCCAAGGGGA
AGCGAACACCGACCCTGTCTGCGGGAGGGACCGCCGGTGGCCGCGGCGAC
GTAGGGGGCATGCGCGGTGTAGGTAATGCCACCCCCAACTTGGTGCCCTC
AGGCAGGGGGGCGGGGGGTAGAGGTAGGGTCGGCGGCGGCGGAATTGGGG
GCGGCCAGCAACACTGGGGAGGGCCGCTGGGTCGAATCGTGGGACAACTC
AGGAGACCGGAGGGAGAGAGCGAGAGCAAACTTGGCGGTGCTGCAGCCGC
AACAGCACCGTTAGAACCGGAAGGCCGTGCTGGTGGTCGTGGGGGTTCCA
CAGCTAGAGGGGGCGTGTTCGGCCCCGGCAGAGGCATTGGGCGCGGGGGC
ATGGGGATGACGAGGGGGGGCGGGTTTGCCGGCGGGGGGTACGCGGACAG
GAACACCCGGCGGCATAGTACCGGCGACAGCGCGAACGGTGACGGCGGTA
GCGCGAAGAAGAGGGGGAGGGGGGGTTGGAAGAAGGACTACGAGGTGATC
GCGTCGGTGGAGAGCAAGGCTGGGGAAGCGGCGGCGGAGGCAGCAGCTGC
TGGATCGGTTGAGAACGCCGACGCTCGGTACGTCGGCTATGAAGAGCTCC
CCACAGACATGCGTCCGCAAGTGCGCGACGTCCTCGCGTTTAAGACGCTT
TCCCTCAACGAGGAGACGTGGACACCCGAGCTCTCGCCATACCGGATGGC
GGAGGTGATTGCCTTCGACGCATCCTCGGGGCTTGTACGATTGCGTCCTG
CGTCGATAGAGGATGACAAAAGGGATGGCGGAGGTAGCGGTAGCGGCGCT
CTCGTGAACGGTTGCACGAAGGGCCACACAGCCGGCCAACAGCAACAGGG
CAGCAGTAGCAGCATTGCTGAGTCCAACGCCGAGGAGGGGAGCGTACCGA
CAAGCAATGGGCACAACGAAGGTGGAGCTAGTGGCGACTCGAAGGGCATG
GAAGACCCAGCGGCGGTAGCAGGTAGTACAGGTGGTGGTTCGGTTAGTCG
GAAGGAAGAAGAGGAGAGCGGCAGTGTTGCGCAACAGCCTGAGGAACCCG
CTGCCGCTGGGGCTTCGCCGGAACCAACAACGGACGGAGGAAACAAAGCC
AGGAGTACCAGCAGCGGGGAGGTCGGCGGAGCGGAGGAAGACCGGGAGTT
GCGCGAAGGCGAGGAAGAGCTCGAGTACAGCTCTCTCGCGAACGTCCGCG
TCGTGCGAGGACCCTCGATGGGCGAGCTGAAGAAGCGCAAGCAAGCCCTC
CAGAAGTGGAACTCCCTCGGTCCCGGGGGCGGTATTCTAGGGGGATCGGC
GGCTGGGAACAATATCAACAATAGCAACAATAACAGCAACACAGATGTTG
ACAGCGCTGCTGCTTCCCCGGCGTCGCTGCCCTCGGCTACCCCCAAGAAG
GCGGGAAGGGGGGGGAGGGGACGGGGTAGGGGAAGAGGAGGTGGAGGCGC
TGGTGGTTCTGCTAGAAAGCAGGGCGTGAAGGGTAAAGGGGCGTCGCCGA
AGAGCGTGGGGAAGAAGCAGGGGGCAGCACGGGGGACCCTAGCGGTCGCA
GGGCTGCTGGGAAAGTGTGCGGGAAAGCTACCGACGGGTGGAGGGAGAGG
GGCTACAGCGAAGGCCACCGCTCCTTCGTCCGCGGTGTAA