prot_Ecto-sp13_S_contig1855.5799.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1855.5799.1 vs. uniprot
Match: A0A6H5L4H0_9PHAE (Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H0_9PHAE) HSP 1 Score: 824 bits (2128), Expect = 1.670e-283 Identity = 823/973 (84.58%), Postives = 836/973 (85.92%), Query Frame = 0
Query: 8 VTFAQMDTVALPPSVVSSPRRIRVVFTADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLTRQLKQRKGKKARSSSLVLTLDGFVLPPTESLDVLRETDVVTLTLQQSDGREHGRTAISGSSXXXXXXXXXXXXXXXXXXXXXS-KKRGGKEGSVSGVGNKAGGKKRGAPAVGAAACRKRSRTGSPAVESSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLPADIPARGAESTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKETKGAKENAKGKRTPTLSAGGTAGGRGDVGGMRGVGNATPNLVPSGRGAGXXXXXXXGGIGGGQQHWGGPLGRIVGQLRRPEGESESKLGGAAAATAPLEPEGRAGGRGGSTARGGVFGPGRGIGRGGMGMTRGGGFAGGGYADRNTRRHSTGDSANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPASIEDDKRDGGGSGSGALVNGCTKGHTAGQQQQGSSSSIAESNAEEGSVPTSNGHNEGGASGDSKGMEDPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARSTSSGEVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELKKRKQALQKWNSLGPGGGILGGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAGRGGRXXXXXXXXXXXXGSARKQGVKGKGASPKSXXXXXXXXXXXXXXXXXXXXXXXXXPTGGGRGATAKATAPSSAV 979
V F +MDTVALPP+V SSPRRIRVVF ADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLTRQLK+RKG+KARSSSLVLTLDGFVLPPTESLDVLRETDVVTLTL+QSDGREHGRTAISG+S XXXXXXX + KKRGG+EGSVSGVGNKAGGKKRGAPAVGAAA RKRSRTGSPAVESSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KLPADIPARGAES XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AKE KGAKENAKG NATPNLVPSGRGAGXXXXXXX GGQQHWGGPLGRIVGQLRRPEGESES GGAAAATAPLEPEGRAG GGVFGPG GMGMTRGGGFAGG YADRNTRRHSTG +ANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPAS EDD +DGGG+GSGA VN CTKGHT GQQQQGSSS IAESN EEGSVPTSNGHNEGG GDSKGME PAA XXXXXXXXXXXXXXXXXXXXXXXXXXX KARSTSSGEVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELKKRKQALQKWNSLGPGGGILGGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KKAGRGG+XXXXXXXXXXXXGSARKQG KG ASPKS PTGGGRGA + TAPSSAV
Sbjct: 49 VIFVKMDTVALPPAVASSPRRIRVVFKADAGCVPSSNPTLTKRWIFIPPRLTVIGDLAHHLTRQLKRRKGRKARSSSLVLTLDGFVLPPTESLDVLRETDVVTLTLRQSDGREHGRTAISGNSTTXXXXXXXGAGKAKTNQKAKAPKKRGGREGSVSGVGNKAGGKKRGAPAVGAAAGRKRSRTGSPAVESSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------KLPADIPARGAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKEPKGAKENAKG-------------------------NATPNLVPSGRGAGXXXXXXXXXXXGGQQHWGGPLGRIVGQLRRPEGESESNGGGAAAATAPLEPEGRAGXXXXXXXVGGVFGPGXXXXXXGMGMTRGGGFAGGRYADRNTRRHSTGHTANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPASTEDDNKDGGGAGSGAFVNDCTKGHTVGQQQQGSSSIIAESNTEEGSVPTSNGHNEGGFGGDSKGMEYPAAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSAEPTTDGRNKARSTSSGEVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELKKRKQALQKWNSLGPGGGILGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KKAGRGGKXXXXXXXXXXXXGSARKQGGKGXXASPKSVGKKQGAARGTLAVAGLLGKCAGKLPTGGGRGAAEEGTAPSSAV 988
BLAST of mRNA_Ecto-sp13_S_contig1855.5799.1 vs. uniprot
Match: D7FZW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW0_ECTSI) HSP 1 Score: 605 bits (1561), Expect = 6.360e-205 Identity = 442/528 (83.71%), Postives = 451/528 (85.42%), Query Frame = 0
Query: 454 MRGVGNATPNLVPSGRGAGXXXXXXXGGIG--GGQQHWGGPLGRIVGQLRRPEGESESKLGGAAAATAPLEPEGRAGGRGGSTARGGVFGPGRGIGRGGMGMTRGGGFAGGGYADRNTRRHSTGDSANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPASIEDDKRDGGGSGSGALVNGCTKGHTAGQQQQGSSSSIAESNAEEGSVPTSNGHNEGGASGDSKGMEDPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARSTSSGEVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELKKRKQALQKWNSLGPGGGILGGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAGRGGRXXXXXXXXXXXXGSARKQGVKGKGASPKSXXXXXXXXXXXXXXXXXXXXXXXXXPTGGGRGATAKATAPSSAV 979
MRGVGNATPNLVPSGRGAGXXXXXXX GGQQHWGGPLGRIVGQLRRPEGESES GGAAAA APLEPEGRAGGRG STARGGVFGPGRGIGRGGMGMTRGGG AGGGYA++NTRRHSTGD+ANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVEN DARYV YEELPTDMRPQV DVLAFKTLSLNEETWTPELSPYR AEV AFD SSGLVRL PASIEDD +DG LVNGCTKGHTAGQQQQGSSS I ESN EEG VPTSNGHN+GG SG+SKGMEDPAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KARSTSSG+VGGAEEDRELREGEEELEYSSLANVRVVRGPSMGEL+KRKQAL KWNSLGPGGGILGG XXXXXXXXXXXXXXXXXXXXXX KKAGRGGRXXXXXXXXXX GSARKQG KGKGASPKS PTGGG GA +ATAPSSAV
Sbjct: 1 MRGVGNATPNLVPSGRGAGXXXXXXXXXXXXXGGQQHWGGPLGRIVGQLRRPEGESESNGGGAAAAIAPLEPEGRAGGRGDSTARGGVFGPGRGIGRGGMGMTRGGGAAGGGYANKNTRRHSTGDTANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENGDARYVVYEELPTDMRPQVCDVLAFKTLSLNEETWTPELSPYRTAEVTAFDTSSGLVRLLPASIEDDNKDGXXXXXXXLVNGCTKGHTAGQQQQGSSSGITESNTEEGRVPTSNGHNQGGVSGNSKGMEDPAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKARSTSSGKVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELEKRKQALHKWNSLGPGGGILGGXXXXXXXXXXXXXXXXXXXXXXXXPASLPSATPKKAGRGGRXXXXXXXXXXACGSARKQGGKGKGASPKSVGKKQGAARGTLAVAGLLGKCAGKLPTGGGGGAAGEATAPSSAV 528
BLAST of mRNA_Ecto-sp13_S_contig1855.5799.1 vs. uniprot
Match: A0A0P0Y9A7_ORYSJ (Coilin n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0Y9A7_ORYSJ) HSP 1 Score: 55.1 bits (131), Expect = 1.310e-5 Identity = 28/83 (33.73%), Postives = 49/83 (59.04%), Query Frame = 0
Query: 28 RIRVVFTADAGCVPSSNPTLTKR-WIFIPPRLTVIGDLAHHLTRQLKQRKGKKARSSSLVLTLDGFVLPPTESLDVLRETDVV 109
R+R+VF S + +R W+ +PP L+ + DLA H+ + + R+ + S ++L++DGFVLPP ES + R+ D++
Sbjct: 10 RLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARFRLRR---SCPSCVILSIDGFVLPPFESTCIFRDNDII 89 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1855.5799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig1855.5799.1 ID=prot_Ecto-sp13_S_contig1855.5799.1|Name=mRNA_Ecto-sp13_S_contig1855.5799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=980bpback to top |