mRNA_Ecto-sp13_S_contig18462.5756.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18462.5756.1 vs. uniprot
Match: D8LTV2_ECTSI ((R)-citramalate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV2_ECTSI) HSP 1 Score: 638 bits (1646), Expect = 3.040e-226 Identity = 333/350 (95.14%), Postives = 336/350 (96.00%), Query Frame = 1
Query: 1 ADIPQGTVNGIGERTGNANLMTIIPTLQLKMGMTGVGEHLTNLTALSRFTDEQARHIYLFPAIKRFNMAHTSGAPFTGMSAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNKKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRTPGGLEFPSGPTTARATVKVRVPSIDSEAELGIEGENPGVRLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSCSIDAGTRS 1050
AD+ QGTVNGIGERTGNANLMTIIPTLQLKMGMTGVGEHLTNLTALSRFTDEQ FNMAHTSGAPFTG+SAFAHKGGIHVSAVNKIPDSYQHIDPAQVGN KRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRTPGGLEFPSGPTTARATVKVRVPS+DSEAELGIEGENPGVRLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSCSIDAGTRS
Sbjct: 269 ADVVQGTVNGIGERTGNANLMTIIPTLQLKMGMTGVGEHLTNLTALSRFTDEQ------------FNMAHTSGAPFTGISAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNMKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRTPGGLEFPSGPTTARATVKVRVPSMDSEAELGIEGENPGVRLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSCSIDAGTRS 606
BLAST of mRNA_Ecto-sp13_S_contig18462.5756.1 vs. uniprot
Match: A0A836CCG4_9STRA ((R)-citramalate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCG4_9STRA) HSP 1 Score: 330 bits (847), Expect = 1.520e-104 Identity = 210/392 (53.57%), Postives = 243/392 (61.99%), Query Frame = 1
Query: 37 ERTGNANLMTIIPTLQLKMGMTGVGEHLTNLTALSRFTDEQARHIYLFPAIKRFNMAHTSGAPFTGMSAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNKKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLL------------------VRRTMSGYVPPFKLLDYLVQIWD---SDR-------TPGGLEFPSGPTTARATVKVRVPS----IDSEAELGIEGENPGVRLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYK---------------------------VRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSCSID 1035
ERTGNANL +I+PTLQLKMG GVGE L LTAL RF DEQ N S AP+ G SAFAHKGGIHVSAVNKIPDSYQHIDPA VGN +R LVSELSG+SNILSKVE+ GM SK E +S W++RM +VL VK LE G ++EGADA+VNL+ +RR M GY PF+L+DY V D SD TPG + PS RATVKV++P+ ++S A G+ RLE AEGNGPV+ALAK L +ALLPTFPSLQ V L DYK VRILDQESAT A TRV+IEF + + W+TVGV+TNIISASM ALMDGFEYALVE+ CS+D
Sbjct: 295 ERTGNANLASIVPTLQLKMGCAGVGERLPELTALCRFVDEQ------------LNRLPDSKAPYVGQSAFAHKGGIHVSAVNKIPDSYQHIDPAAVGNVRRTLVSELSGRSNILSKVEEFGMGSKEEF-SSPEWQDRMNRVLTAVKTLEKRGSTFEGADATVNLIEPLRXXXXXXXXXXXXXMIRRLMPGYTAPFRLMDYTVTAADTMGSDALRGEETGTPGSV-MPS----VRATVKVKLPAGVSQMESLASFWDNGDRT-QRLESAEGNGPVNALAKALNKALLPTFPSLQHVVLKDYKASRRPAQLPELRVFVGEVVQELKFQLKVRILDQESATAANTRVMIEFMDSHHNQQWATVGVDTNIISASMCALMDGFEYALVEYAPCCSLD 667
BLAST of mRNA_Ecto-sp13_S_contig18462.5756.1 vs. uniprot
Match: A0A7S2UWY3_9STRA ((R)-citramalate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWY3_9STRA) HSP 1 Score: 306 bits (784), Expect = 1.810e-95 Identity = 182/361 (50.42%), Postives = 243/361 (67.31%), Query Frame = 1
Query: 1 ADIPQGTVNGIGERTGNANLMTIIPTLQLKMGMTGVGEHLTNLTALSRFTDEQARHIYLFPAIKRFNMAHTSGAPFTGMSAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNKKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSD-------RTPGGLEFPSGPTTARATVKVRVPSID-SEAELGIEGENPGVRLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQ---ESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQ-SCSIDAGTR 1047
A + QGT+NG+GERTGNANL ++IP LQLKMG GVG+ L +LT++SRF+DE N + APF G SAFAHKGGIHVSA+ K P SYQHI+P +VGN KRVLVSEL+G+SNI++KVE+ G+ + VW+ER Q+L VK LE GY++EGA+ASVNL++RR+ Y PPF + DY++QIWD D P +E +ARATVKV V +E +L LEVAEGNGPV+ALA L + L+PTFP L+ ++LSDYKVRILD +S T + RV+++F +KS+ ++TVG ++NIISAS++AL+DG EYAL+ G+ +C++D T
Sbjct: 316 ATVVQGTINGLGERTGNANLCSVIPNLQLKMGYHGVGDKLKDLTSVSRFSDEL------------MNRSPNPAAPFVGASAFAHKGGIHVSAIAKNPLSYQHIEPEEVGNLKRVLVSELAGRSNIMTKVEEYGLIGQDS--DLNVWKERSVQILNKVKALEKSGYTFEGAEASVNLMLRRSSDMYTPPFAIQDYMLQIWDQDVDSVMRFSDPSVVEPYYFHGSARATVKVLVMEHTCNEKQL----------LEVAEGNGPVNALANALMKGLVPTFPVLEELELSDYKVRILDMSCGKSGTSSVVRVMMDF-KKSNGDKYTTVGADSNIISASLNALVDGLEYALI--GELNCAVDYDTE 649
BLAST of mRNA_Ecto-sp13_S_contig18462.5756.1 vs. uniprot
Match: A0A1Z5JTT2_FISSO ((R)-citramalate synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTT2_FISSO) HSP 1 Score: 302 bits (774), Expect = 2.720e-94 Identity = 176/351 (50.14%), Postives = 232/351 (66.10%), Query Frame = 1
Query: 13 QGTVNGIGERTGNANLMTIIPTLQLKMGMT-GVGEHLTNLTALSRFTDEQARHIYLFPAIKRFNMAHTSGAPFTGMSAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNKKRVLVSELSGQSNILSKVEDSGM-ASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRTPG-------GLEFPSGPTTARATVKVRVPSIDSEAELGIEGENPGV--RLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSCSI 1032
QGT+NGIGERTGNA+L +IIPTL L MG + L NLT++SR+ DE N + AP+ G+SAFAHKGG+HV+A+ + P SYQHIDPA VGN+ RVL+SELSG+ NILSK+E +G+ S+T +R +L VK LE GY++EGA+ASV+L++ GY PPF++LDY Q++DS+ G+ S TARAT+KVR S S+ + P RLEV +GNGPVDALA L RA+ P+ P L++++L DYKVRILD +SATQA TRV+IEF + D W+TV V+TN+ISAS++AL+DGFEYAL+E QSC +
Sbjct: 291 QGTINGIGERTGNADLCSIIPTLALHMGSNIACKKQLLNLTSVSRYVDEI------------LNRSPNVAAPYVGISAFAHKGGLHVAAMERSPLSYQHIDPALVGNEMRVLISELSGRQNILSKMEAAGVDISETGTN------DRALAILNRVKELEAVGYTFEGAEASVHLMILHATRGYCPPFRVLDYSAQVYDSNIDSATRVMKKHGISSSSLAPTARATIKVRTVSGSSDDDDCDTTNRPPFEDRLEVGDGNGPVDALAAALTRAVTPSHPYLKNIELVDYKVRILDPQSATQAATRVMIEFRDTQKDTKWTTVSVDTNVISASLNALVDGFEYALIEHSQSCPL 623
BLAST of mRNA_Ecto-sp13_S_contig18462.5756.1 vs. uniprot
Match: A0A7S4QUS5_9STRA ((R)-citramalate synthase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QUS5_9STRA) HSP 1 Score: 300 bits (767), Expect = 7.040e-93 Identity = 174/356 (48.88%), Postives = 235/356 (66.01%), Query Frame = 1
Query: 1 ADIPQGTVNGIGERTGNANLMTIIPTLQL--KMGMTGVGEHLTNLTALSRFTDEQARHIYLFPAIKRFNMAHTSGAPFTGMSAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNKKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRTP-------GGLEFPSG--PTTARATVKVRVPSIDSEAELGIEGENPGV---RLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSC 1026
A + QGT+NGIGERTGNA+L +I+P+L L K +T L N+T+LSRF DE N + S AP+ G SAFAHKGG+HV+A+ + P SYQH++PA VGN+KRVLVSELSG+ NIL K D+G+ + ER +L VK LE+ GY++EGADASV+L++ + GY PPF++LDY Q++D++ G LE +G +TARAT+KVR ++D EA G+ P RLEV++GNGPVDAL+ L RAL P P L +++L+DYKVRILD E AT A TRV+I+F + ++ W+TV V+ N+ISAS++AL+DGFEYALV+ SC
Sbjct: 319 AGMIQGTINGIGERTGNADLCSIVPSLSLHVKSNLT-CNPSLANITSLSRFIDET------------LNRSPDSAAPYVGASAFAHKGGLHVAAMERSPMSYQHVEPALVGNEKRVLVSELSGRQNILGKFRDAGLVDHPD---DDPVEERASAILNRVKHLESIGYTFEGADASVHLMILHSTRGYCPPFRILDYSAQVYDNNMDSASRVLEKGKLEHANGMGSSTARATIKVRTLNLDDEAYTS--GDAPLAFIDRLEVSDGNGPVDALSSALKRALSPPHPFLNTIELTDYKVRILDPEKATGATTRVMIDFEDTTTGESWTTVSVDRNVISASLNALVDGFEYALVQHSDSC 656
BLAST of mRNA_Ecto-sp13_S_contig18462.5756.1 vs. uniprot
Match: A0A7S1VQR5_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VQR5_9STRA) HSP 1 Score: 291 bits (745), Expect = 2.330e-92 Identity = 171/361 (47.37%), Postives = 233/361 (64.54%), Query Frame = 1
Query: 1 ADIPQGTVNGIGERTGNANLMTIIPTLQLKMGMT-GVGEHLTNLTALSRFTDEQARHIYLFPAIKRFNMAHTSGAPFTGMSAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNKKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRTPGGLEFPS-------------GPTTARATVKVRVPSIDSEAELGIEGENPGV---RLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSCSI 1032
A + QGT+NGIGERTGNA+L +IIPTL LK GVG L LT++S+F DE I AP+ G SAF HKGG+HV+A+ + DSYQHI+P VGN++R +VSEL+G+ IL K+ D+G+ ++++ R +L VKRLE++GY++EGA+ASV+L++ GY PPFK+LDY VQ++DS+ GPT ARATVKVR ++D +A ++ P + LEV++GNGPVDALA+ L R+L+P+ P+L ++L DYKVRILD ESAT A TRV+IEF + D W+T V+ NIISAS++AL+DGFEYAL+E QSC +
Sbjct: 87 AGLIQGTINGIGERTGNADLCSIIPTLALKEESNMGVGGQLHELTSVSKFVDELLGRI------------PNPAAPYVGSSAFCHKGGLHVAAMERNADSYQHIEPTLVGNERRTVVSELAGRQTILGKMRDAGVETESD---------RAMAILNRVKRLESKGYTFEGAEASVHLMILHASRGYCPPFKVLDYSVQVYDSNMDSASRVMQKQMQSTNEDNDGDVGPT-ARATVKVRTLNLDEDAYSSMD--EPLLFKDHLEVSDGNGPVDALAQALMRSLVPSHPTLSGMQLVDYKVRILDPESATGASTRVMIEF--RDGDATWTTTSVDRNIISASVNALVDGFEYALIEHAQSCML 421
BLAST of mRNA_Ecto-sp13_S_contig18462.5756.1 vs. uniprot
Match: B8C732_THAPS ((R)-citramalate synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C732_THAPS) HSP 1 Score: 291 bits (746), Expect = 9.260e-91 Identity = 176/354 (49.72%), Postives = 234/354 (66.10%), Query Frame = 1
Query: 13 QGTVNGIGERTGNANLMTIIPTLQLKMG--MTGVGEHLTNLTALSRFTDEQARHIYLFPAIKRFNMAHTSGAPFTGMSAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNKKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSD---------RTPGGLEFPSG-PTT-ARATVKVRVPSIDSEAELGIEGENPGVRLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSCSID 1035
QGTVNGIGERTGNA+L +I+P+L L + MT ++L +T+LSRF DE N GAP+ G SAFAHKGG+HV+A+ + PDSYQHI+P +VGN+ RVL+SELSG+ NI+ K++ + ++ A ER +L VK+LE+ GY++EGADASV L++ + GY PPF++LDY Q++D++ + G G PT ARATVKVRV + +E RLEV+EGNGPVDALA L +AL P+ PSL++++L DYKVRILD ESATQA TRV+IEF + +++ WSTV V+ NIISAS++AL+DGFEYAL E SC ID
Sbjct: 234 QGTVNGIGERTGNADLCSIVPSLALHVDSKMT-CNDNLEEITSLSRFLDET------------LNRTPNKGAPYVGHSAFAHKGGLHVAALERSPDSYQHIEPGKVGNQLRVLISELSGRQNIVGKIKKLDLDIGDDVVA-----ERSLVILDRVKKLESMGYTFEGADASVELMILHSTQGYCPPFRVLDYTAQVYDTNVDSASRVMSKMENGKHNNDGIPTNLARATVKVRVLDDPNHSEDEFLD-----RLEVSEGNGPVDALANALKKALTPSHPSLENLQLIDYKVRILDPESATQAATRVMIEFTDVTTNQKWSTVSVDRNIISASLNALVDGFEYALKEVVASCVID 564
BLAST of mRNA_Ecto-sp13_S_contig18462.5756.1 vs. uniprot
Match: A0A2V3IHB1_9FLOR ((R)-citramalate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHB1_9FLOR) HSP 1 Score: 288 bits (737), Expect = 2.770e-89 Identity = 172/352 (48.86%), Postives = 226/352 (64.20%), Query Frame = 1
Query: 1 ADIPQGTVNGIGERTGNANLMTIIPTLQLKMGMTGVGEHLTNLTALSRFTDEQARHIYLFPAIKRFNMAHTSGAPFTGMSAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNKKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRTPGGLEF---PSGPTTARATVKVRVPSIDSEAELGIE--GENPGVRL--EVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSCSID 1035
A + QGT+NG GERTGNANLM+I+PTLQLKMG VG+ L LT LSR+TDE N H P+ G S+FAHKGG+HV+AV K ++YQHIDP VGN++R+LVSELSG+ NIL+K E+ G+ E K W R+ VL+ VK LE +GYS+EGA+AS+ L++RRT+ GY PPF+LLD+ V D+ R G P+ + +A+VK+ A LG E G+ ++ E+AEGNGPVDA+ L + LLP + L+SV L DYKVRILD S T A TRV++EF E S+ W+TV + NII AS++ALMDGFE A+ + C I+
Sbjct: 251 ATLVQGTINGFGERTGNANLMSIVPTLQLKMGHDCVGDRLQQLTDLSRYTDEIT------------NQPHVPNRPYVGASSFAHKGGLHVAAVLKDENTYQHIDPVLVGNERRILVSELSGRRNILTKAEELGLHPADESKDGVEWNVRVKAVLEQVKELENKGYSFEGAEASLELMLRRTVHGYRPPFELLDFSVST-DNKRVVYGNVLNATPNNESVTQASVKL--------ALLGPEDGGDQCPTKICFEIAEGNGPVDAVNGALQKCLLPVYAPLRSVSLVDYKVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAMWDQLPQCIIN 581
BLAST of mRNA_Ecto-sp13_S_contig18462.5756.1 vs. uniprot
Match: R7QGZ5_CHOCR ((R)-citramalate synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGZ5_CHOCR) HSP 1 Score: 287 bits (735), Expect = 3.120e-89 Identity = 171/348 (49.14%), Postives = 228/348 (65.52%), Query Frame = 1
Query: 1 ADIPQGTVNGIGERTGNANLMTIIPTLQLKMGMTGVGEHLTNLTALSRFTDEQARHIYLFPAIKRFNMAHTSGAPFTGMSAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNKKRVLVSELSGQSNILSKVEDSGMA-SKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRT---PGGLEFPSGPTTARATVKVRVPSIDSEAELGIEGENPGVRLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSCSI 1032
A + QGTVNG GERTGNANLM+I+PTLQLK+G VG+ L+ LT+LSRF DE A SG PF G+S+FAHKGG+HV+AV K D+YQHIDP+ VGN+KR+LVSEL+G+ N+LSK E+ G+ + + A + W R QVL VK LE +GYS+EGA+AS+ L++RR++ GY PPF+LLD+ V D+ R P P + +ATVK+ + + G E + LEVAEGNGP+DA+ L + L + LQ+V L+DYKVRILD ESAT A TRV+++F + +S W+TV + NII AS++ALMDGFE A+ + C I
Sbjct: 229 ASLVQGTVNGYGERTGNANLMSIVPTLQLKLGYACVGDALSKLTSLSRFVDEIACQ------------KPVSGQPFVGVSSFAHKGGLHVAAVLKNEDTYQHIDPSLVGNEKRILVSELAGRRNVLSKAEELGLVPAGDDAGARQEWGNRAKQVLGQVKDLENKGYSFEGAEASLELMLRRSVEGYRPPFELLDFSVTT-DNKRIHYGPNSEGPPFNESVTQATVKIALLG----PKDGGEACPTKICLEVAEGNGPIDAVNGALGKVLFSMYQPLQTVALTDYKVRILDSESATAATTRVVVDFEDSASGRQWTTVYAHPNIIVASVNALMDGFEVAMWDSLPQCCI 559
BLAST of mRNA_Ecto-sp13_S_contig18462.5756.1 vs. uniprot
Match: A0A7S0C9D0_9STRA ((R)-citramalate synthase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9D0_9STRA) HSP 1 Score: 284 bits (727), Expect = 3.480e-89 Identity = 170/367 (46.32%), Postives = 228/367 (62.13%), Query Frame = 1
Query: 1 ADIPQGTVNGIGERTGNANLMTIIPTLQLKMGMTGVG--EHLTNLTALSRFTDEQARHIYLFPAIKRFNMAHTSGAPFTGMSAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNKKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRTPGG--------------------LEFPSGPTTARATVKVRVPSIDSEAELGIEGENPGVRLEVAEGNGPVDALAKGLFRALLPTFPSL-QSVKLSDYKVRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSCSI 1032
A + QGT+NGIGERTGNA+L TIIP+L L G + + + L+ LT LSRF DE N + + APF G SAFAHKGG+HV+A+ + PDSYQHIDP VGN+KRVL+SELSG+ NIL K+ ++G+ + S+V ER +L+ VK LE+ GY++EGA+ASV+L++ GY PPF +LDY Q++DS+ + TARAT+K+R P++D A+ G E RLE A+G GP+DAL L AL + P L QSV + DYKVRILD ++AT+A RV+IEF +D W+TV V+ NIISAS++AL+DGFEYAL+E C +
Sbjct: 105 AGMVQGTMNGIGERTGNADLCTIIPSLALH-GSSNLTCRDSLSGLTTLSRFVDET------------MNRSPVTSAPFVGASAFAHKGGLHVAAMERSPDSYQHIDPTAVGNEKRVLISELSGRQNILDKIREAGVLFGDTHEQSEVMSERANAILERVKLLESIGYTFEGANASVHLMILHATRGYCPPFSVLDYSAQVFDSNMDSASRVMRKQXXXXXXXXXXXXXXVVIQRASPTARATIKIRTPNVD--AKHGDELYTD--RLEAADGKGPIDALGTALTNALKSSHPLLSQSVIIVDYKVRILDPKTATEAAARVMIEFKNVETDTSWTTVSVDRNIISASLNALVDGFEYALIEDHSECML 454 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18462.5756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18462.5756.1 >prot_Ecto-sp13_S_contig18462.5756.1 ID=prot_Ecto-sp13_S_contig18462.5756.1|Name=mRNA_Ecto-sp13_S_contig18462.5756.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=351bp ADIPQGTVNGIGERTGNANLMTIIPTLQLKMGMTGVGEHLTNLTALSRFTback to top mRNA from alignment at Ecto-sp13_S_contig18462:9..3398- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18462.5756.1 ID=mRNA_Ecto-sp13_S_contig18462.5756.1|Name=mRNA_Ecto-sp13_S_contig18462.5756.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3390bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18462:9..3398- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18462:9..3398- >mRNA_Ecto-sp13_S_contig18462.5756.1 ID=mRNA_Ecto-sp13_S_contig18462.5756.1|Name=mRNA_Ecto-sp13_S_contig18462.5756.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1053bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18462:9..3398- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |