mRNA_Ecto-sp13_S_contig18341.5696.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18341.5696.1 vs. uniprot
Match: A0A6H5JMS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS0_9PHAE) HSP 1 Score: 179 bits (453), Expect = 4.840e-52 Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 1
Query: 4 KVIEDTDDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD 246
+VIEDTDDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD
Sbjct: 137 QVIEDTDDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD 217
BLAST of mRNA_Ecto-sp13_S_contig18341.5696.1 vs. uniprot
Match: D7G1D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D6_ECTSI) HSP 1 Score: 174 bits (441), Expect = 2.510e-50 Identity = 77/81 (95.06%), Postives = 80/81 (98.77%), Query Frame = 1
Query: 4 KVIEDTDDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD 246
+VIED DDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACED++EVSGEAAKAWVSRPALGKHICFD
Sbjct: 137 QVIEDADDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDMEEVSGEAAKAWVSRPALGKHICFD 217
BLAST of mRNA_Ecto-sp13_S_contig18341.5696.1 vs. uniprot
Match: A0A835ZJA8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJA8_9STRA) HSP 1 Score: 111 bits (277), Expect = 3.210e-27 Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 1 LKVIEDTDDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD 246
++VI DDIGWHWDKDY EA G NVHP LATVTYLS GGPTVVL K+ P+ C D + G + +SRPA+GKH+CFD
Sbjct: 127 VQVIGGDDDIGWHWDKDYATEASGFNVHPHLATVTYLSDVGGPTVVLNKRDPVTCGD--SLEGTITRCCLSRPAVGKHMCFD 206
BLAST of mRNA_Ecto-sp13_S_contig18341.5696.1 vs. uniprot
Match: W7T7W1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7W1_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.490e-22 Identity = 44/82 (53.66%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1 LKVIEDTDDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD 246
++V+E+ DDIG H+DKDY +EA G+N++P LATVTYLS+ GGPT+VL GP+ + ++SG + AW+S PA+GKH FD
Sbjct: 12 VQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGE--DLSGALSGAWLSLPAVGKHTVFD 91
BLAST of mRNA_Ecto-sp13_S_contig18341.5696.1 vs. uniprot
Match: A0A4D9D1L4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1L4_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.880e-22 Identity = 44/82 (53.66%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1 LKVIEDTDDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD 246
++V+E+ DDIG H+DKDY +EA G+N++P LATVTYLS+ GGPT+VL GP+ + ++SG + AW+S PA+GKH FD
Sbjct: 186 VQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGE--DLSGALSGAWLSLPAVGKHTVFD 265
BLAST of mRNA_Ecto-sp13_S_contig18341.5696.1 vs. uniprot
Match: K8YX42_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YX42_NANGC) HSP 1 Score: 98.2 bits (243), Expect = 2.540e-22 Identity = 44/82 (53.66%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1 LKVIEDTDDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD 246
++V+E+ DDIG H+DKDY +EA G+N++P LATVTYLS+ GGPT+VL GP+ + ++SG + AW+S PA+GKH FD
Sbjct: 164 VQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGE--DLSGALSGAWLSLPAVGKHTVFD 243
BLAST of mRNA_Ecto-sp13_S_contig18341.5696.1 vs. uniprot
Match: K8YUU4_NANGC (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YUU4_NANGC) HSP 1 Score: 98.2 bits (243), Expect = 3.940e-22 Identity = 44/82 (53.66%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1 LKVIEDTDDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD 246
++V+E+ DDIG H+DKDY +EA G+N++P LATVTYLS+ GGPT+VL GP+ + ++SG + AW+S PA+GKH FD
Sbjct: 186 VQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGE--DLSGALSGAWLSLPAVGKHTVFD 265
BLAST of mRNA_Ecto-sp13_S_contig18341.5696.1 vs. uniprot
Match: A0A8K1C7D8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7D8_PYTOL) HSP 1 Score: 95.5 bits (236), Expect = 2.590e-21 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 1 LKVIEDTDDIGWHWDKDYGMEAR-GINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD 246
L E DD+ +HWD+DYG+E +N+HP + TVTYLST GGPT+VL+K P+ D +G+ AK ++SRPA+GKHI FD
Sbjct: 156 LDAGETNDDVSFHWDRDYGLEDEYRVNLHPHIGTVTYLSTIGGPTIVLDKVSPVQTGSDDCGAGDIAKGYLSRPAMGKHISFD 238
BLAST of mRNA_Ecto-sp13_S_contig18341.5696.1 vs. uniprot
Match: A0A1Z5JMW3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMW3_FISSO) HSP 1 Score: 89.0 bits (219), Expect = 4.930e-19 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 22 DDIGWHWDKDYGMEARGIN--VHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD 246
D++G H+D DYG+E + N VHP LATVTYLS G PTVV KK P +D+D + GE AW+S+P++GKHI FD
Sbjct: 153 DEVGMHFDADYGLEEQAPNLLVHPRLATVTYLSDFGAPTVVFNKKSPPP-KDIDSLGGEIRTAWLSQPSVGKHIAFD 228
BLAST of mRNA_Ecto-sp13_S_contig18341.5696.1 vs. uniprot
Match: A0A7S0DNN1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DNN1_9EUKA) HSP 1 Score: 88.6 bits (218), Expect = 5.150e-19 Identity = 41/78 (52.56%), Postives = 52/78 (66.67%), Query Frame = 1
Query: 16 DTDD-IGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDVDEVSGEAAKAWVSRPALGKHICFD 246
D DD +GWH+DKDY +EA G+NVHP +ATVTYLS+ G PTV LEK ++G +K +VS P GKH+ FD
Sbjct: 109 DLDDAVGWHFDKDYALEANGVNVHPHIATVTYLSSGGAPTVFLEKCVSSPIVGSMALTGSVSKGYVSWPVTGKHVSFD 186 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18341.5696.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18341.5696.1 >prot_Ecto-sp13_S_contig18341.5696.1 ID=prot_Ecto-sp13_S_contig18341.5696.1|Name=mRNA_Ecto-sp13_S_contig18341.5696.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=82bp LKVIEDTDDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKback to top mRNA from alignment at Ecto-sp13_S_contig18341:2..544- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18341.5696.1 ID=mRNA_Ecto-sp13_S_contig18341.5696.1|Name=mRNA_Ecto-sp13_S_contig18341.5696.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18341:2..544- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18341:2..544- >mRNA_Ecto-sp13_S_contig18341.5696.1 ID=mRNA_Ecto-sp13_S_contig18341.5696.1|Name=mRNA_Ecto-sp13_S_contig18341.5696.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=246bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18341:2..544- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |