mRNA_Ecto-sp13_S_contig1829.5674.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1829.5674.1
Unique NamemRNA_Ecto-sp13_S_contig1829.5674.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1829.5674.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 2.280e-71
Identity = 228/316 (72.15%), Postives = 249/316 (78.80%), Query Frame = 2 
Query:   14 MALADRDALVALFRSTGGASWGRKDRWDTSAEL--ATWCGVEVNDEGRVVRLSLGSNNLEGHIPPQLGKLGALEGL------------------------HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALWDHTRGVQD-VGQEAARTMSGGHIPSELRRLLDTLDRAERAYLDLGSNPWAEPPESIVANGMKSVRGYFEDLYAEPCRVQRSSIKIVLVGQEGAGKTSLRKSMKANEATLTGETKEESTVFADVEPMEIEGSSV 880
            MA  DR AL ALFRSTGG  W RKD WDT+A+L  ATW GVEVN +GRV++LSL  NNL+G +P +LG L  L+ L                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +ALWDHT  +QD V +E A  MSGG IPS+L RLLD LDRAE   L L  NPWAEPPESIVA G KS+RGYFEDLYAEPCRV+RSS+K++LVGQEGAGKTSLR+SMK NEAT TG+ KEESTVFADVEPME+EGSSV
Sbjct:    1 MADTDRGALKALFRSTGGVRWKRKDNWDTAADLHVATWLGVEVNHQGRVMKLSLDKNNLQGPMPAELGALAELKELWLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTALWDHTHYLQDIVHEEGAHGMSGGRIPSQLCRLLDVLDRAEGGVLSLEDNPWAEPPESIVAKGPKSIRGYFEDLYAEPCRVERSSVKVILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSV 316
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BLAST of mRNA_Ecto-sp13_S_contig1829.5674.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 3.380e-66
Identity = 208/289 (71.97%), Postives = 234/289 (80.97%), Query Frame = 2 
Query:   14 MALADRDALVALFRSTGGASWGRKDRWDTSAELATWCGVEVNDEGRVVRLSLGSNNLEGHIPPQLGKLGALEGLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALWDHTRGVQDVGQEAARTMSGGHIPSELRRLLDTLDRAERAYLDLGSNPWAEPPESIVANGMKSVRGYFEDLYAEPCRVQRSSIKIVLVGQEGAGKTSLRKSMKANEATLTGETKEESTVFADVEPMEIEGSSV 880
            MA  DRDALVALFRS GGA+W RK+ WDT+A+L +W GV +N++GRV  L L  NNL+G IP ++G L  +E L   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +ALWDHT+  Q V +   RT+ GG +PS+L RLLD LDRA    L L  NPWAEPP SIV+ G  S+RGYFEDLY E  RVQR+S+KI+LVGQEGAGKTSLR+SMKAN A  TGE KEESTVFADVEPM++EGS V
Sbjct:    1 MASTDRDALVALFRSAGGATWRRKENWDTAADLESWFGVILNNQGRVAELKLAVNNLQGVIPEKIGALNKIEILTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNELTALWDHTQNAQHVEEGGNRTL-GGQLPSQLCRLLDVLDRATGGILGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFV 288
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BLAST of mRNA_Ecto-sp13_S_contig1829.5674.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 8.100e-58
Identity = 106/134 (79.10%), Postives = 117/134 (87.31%), Query Frame = 2 
Query:  479 LWDHTRGVQDVGQEAARTMSGGHIPSELRRLLDTLDRAERAYLDLGSNPWAEPPESIVANGMKSVRGYFEDLYAEPCRVQRSSIKIVLVGQEGAGKTSLRKSMKANEATLTGETKEESTVFADVEPMEIEGSSV 880
            LWDHT   +DVGQE A+ MSGG IPSELRRLL+TLD A+    DLG NPWAEPPESIV  GM+S+RGYFEDLYAEPCRVQR S+K+VLVGQEGAGKTSLR+SMKANEAT TGE KEESTVFADV+PME+EGSSV
Sbjct:  516 LWDHTCNAEDVGQERAKRMSGGTIPSELRRLLETLDGADT---DLGGNPWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRRSVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVQPMELEGSSV 646
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BLAST of mRNA_Ecto-sp13_S_contig1829.5674.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 6.880e-55
Identity = 217/395 (54.94%), Postives = 241/395 (61.01%), Query Frame = 2 
Query:   14 MALADRDALVALFRSTGGASWGRKDRWDTSAELATWCGVEVNDEGRVVRLSLGSNNLEGHIPPQLGKLGALEGLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------------------------------------------SALWDHTRGVQDVG-QEAARTMSGGHIPSELRRLLDTLDRAERAYLD---------LGSNPWAEPPESIVANGMKSVRGYFEDLYAEPCRVQRSSIKIVLVGQEGAGKTSLRKSMKANEATLTGETKEESTVFADVEPMEIEGSSV 880
            MA  DR+AL+ALFR T G  W R+  W T AELATW GV+VN +GRVV+L L +NNL+G IPP LGKL AL+ L+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                SALWDHT+ VQDV  +E   +M GG +PS+L RLLD  D  E   L+         L  NPWAEPPESIVA G KS+RGYFEDLYAE CR++R  +K+VLVGQEGAGKTSLR+SMKAN+ATLTGE KE STV ADVE ME+EGSSV
Sbjct:    1 MASTDREALIALFRLTCGYGWSRRGNWGTDAELATWDGVQVNGQGRVVKLGLAANNLQGPIPPALGKLAALQDLYLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALWDHTQNVQDVDHKERGHSMPGGPMPSQLCRLLDIFDSVEAQGLNDTGIGPSLSLSENPWAEPPESIVAKGPKSIRGYFEDLYAEHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATLTGEWKENSTVLADVESMELEGSSV 395
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BLAST of mRNA_Ecto-sp13_S_contig1829.5674.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 1.720e-52
Identity = 101/138 (73.19%), Postives = 115/138 (83.33%), Query Frame = 2 
Query:  473 SALWDHTRGVQDVG-QEAARTMSGGHIPSELRRLLDTLDRAERAY-LDLGSNPWAEPPESIVANGMKSVRGYFEDLYAEPCRVQRSSIKIVLVGQEGAGKTSLRKSMKANEATLTGETKEESTVFADVEPMEIEGSSV 880
            +ALW+HT  V+D   +EA+ +M GG  P +L RLLD LDRAER   L+L  NPWAEPPESIVA G K++RGYFEDLYAEPCRVQRSS+KI+LVGQEGAGKTSLRKSMKA EAT TGE KEESTVFADVE ME+EGSS+
Sbjct:  250 TALWNHTLNVEDARHEEASHSMQGGSFPRQLCRLLDVLDRAEREVDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSI 387
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BLAST of mRNA_Ecto-sp13_S_contig1829.5674.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 3.160e-52
Identity = 96/137 (70.07%), Postives = 115/137 (83.94%), Query Frame = 2 
Query:  473 SALWDHTRGVQDVGQEAARTMSGGHIPSELRRLLDTLDRAERA-YLDLGSNPWAEPPESIVANGMKSVRGYFEDLYAEPCRVQRSSIKIVLVGQEGAGKTSLRKSMKANEATLTGETKEESTVFADVEPMEIEGSSV 880
            +ALWDHT+ VQDV  +   +MSGG +PS+L RLLD L+  E   +L L SNPWAEPPESIVA G+KSVRGYFEDL+A+ CR++R  +K+VLVGQEGAGKTSLR+SMKAN+AT TGE KEESTVFADVEPM++EGSSV
Sbjct:   88 TALWDHTQNVQDVNHDGGDSMSGGPMPSQLCRLLDLLESREAGRHLSLNSNPWAEPPESIVAKGLKSVRGYFEDLFADHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMKLEGSSV 224
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BLAST of mRNA_Ecto-sp13_S_contig1829.5674.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 5.180e-51
Identity = 94/136 (69.12%), Postives = 113/136 (83.09%), Query Frame = 2 
Query:  476 ALWDHTRGVQDVG-QEAARTMSGGHIPSELRRLLDTLDRAERAYLDLGSNPWAEPPESIVANGMKSVRGYFEDLYAEPCRVQRSSIKIVLVGQEGAGKTSLRKSMKANEATLTGETKEESTVFADVEPMEIEGSSV 880
            ALWDHT+ VQD+  +E   +MSGG +PS+L RLLD LD     Y+ LG NPW EPPES+VA G KS+RGYFEDLYAEPCR+ RSS+K+VLVGQEGAGKTSLR+SMKAN+A+ TG+  EESTVFA+VEPME++GSSV
Sbjct:  323 ALWDHTQDVQDIDPKERGDSMSGGTMPSQLCRLLDVLDPVPSRYVGLGGNPWTEPPESVVAKGPKSIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVEPMELDGSSV 458
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BLAST of mRNA_Ecto-sp13_S_contig1829.5674.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 1.100e-50
Identity = 99/137 (72.26%), Postives = 112/137 (81.75%), Query Frame = 2 
Query:  473 SALWDHTRGVQDVG-QEAARTMSGGHIPSELRRLLDTLDRAERAYLDLGSNPWAEPPESIVANGMKSVRGYFEDLYAEPCRVQRSSIKIVLVGQEGAGKTSLRKSMKANEATLTGETKEESTVFADVEPMEIEGSSV 880
            +ALWDHT+ VQDV  +E    M GG +PS+L RLL  LDR     L L  NPWAEPPESIVA G KS+RGYFEDLYAEPC ++RSS+K+VLVGQEGAGKTSLR+SMKAN+AT TGE KEESTVFADVEPME+EGSSV
Sbjct:   39 AALWDHTQNVQDVHHKEGGDIMPGGAMPSQLCRLLVVLDRLSGVNLALLGNPWAEPPESIVAKGPKSIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSV 175
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BLAST of mRNA_Ecto-sp13_S_contig1829.5674.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 1.860e-50
Identity = 97/140 (69.29%), Postives = 113/140 (80.71%), Query Frame = 2 
Query:  473 SALWDHTRGVQDVGQ-EAARTMSGGHIPSELRRLLDTLDRAERAY---LDLGSNPWAEPPESIVANGMKSVRGYFEDLYAEPCRVQRSSIKIVLVGQEGAGKTSLRKSMKANEATLTGETKEESTVFADVEPMEIEGSSV 880
            SALWDHT+  +D+G  E  + MSGG +PS+L RLLD LD  ++     L LG+NPW EPPE IV  G K+VRGYFEDLYAEPCR++RS +K+VLVGQEGAGKTSLR+SMKANEAT TGE KEESTVFADVE ME+EGSSV
Sbjct:  105 SALWDHTQNAEDIGHDEGTQRMSGGPMPSQLCRLLDVLDDIQQGKFQSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLYAEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEGSSV 244
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BLAST of mRNA_Ecto-sp13_S_contig1829.5674.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 3.090e-48
Identity = 97/137 (70.80%), Postives = 109/137 (79.56%), Query Frame = 2 
Query:  473 SALWDHTRGVQDVGQEAART-MSGGHIPSELRRLLDTLDRAERAYLDLGSNPWAEPPESIVANGMKSVRGYFEDLYAEPCRVQRSSIKIVLVGQEGAGKTSLRKSMKANEATLTGETKEESTVFADVEPMEIEGSSV 880
            SALWDHT+ VQD  Q+     MSGG +P +L RLLD L   ERA + L  NPWAEPPESIV  G KS+R YFEDLYAEPCR++R S K+VLVGQEGAGK+SLR+SMKANE T TGE KEESTVFADVEPME+EGSSV
Sbjct:   61 SALWDHTQNVQDEDQDKGGCGMSGGSMPGQLCRLLDVL---ERAKIVLDGNPWAEPPESIVDKGRKSMRSYFEDLYAEPCRIERISTKVVLVGQEGAGKSSLRQSMKANEPTPTGEWKEESTVFADVEPMELEGSSV 194
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1829.5674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUC3_ECTSI2.280e-7172.15LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC9_ECTSI3.380e-6671.97LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LCS7_ECTSI8.100e-5879.10LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LJS7_ECTSI6.880e-5554.94LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUD0_ECTSI1.720e-5273.19LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5L650_9PHAE3.160e-5270.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF46_ECTSI5.180e-5169.12LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FZA1_ECTSI1.100e-5072.26LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5KSZ8_9PHAE1.860e-5069.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G431_ECTSI3.090e-4870.80LRR-GTPase of the ROCO family, incomplete sequence... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1829contigEcto-sp13_S_contig1829:2715..8387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score249.6
Seed ortholog evalue1.8e-63
Seed eggNOG ortholog2880.D7FUC3
Model size880
KEGG rclassRC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248
KEGG koko:K01188
KEGG ReactionR00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040
KEGG Pathwayko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003002,GO:0003006,GO:0003674,GO:0004857,GO:0007275,GO:0007389,GO:0008150,GO:0009791,GO:0009908,GO:0022414,GO:0030234,GO:0032501,GO:0032502,GO:0043086,GO:0044092,GO:0048367,GO:0048608,GO:0048731,GO:0048832,GO:0048833,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0061458,GO:0065007,GO:0065009,GO:0090567,GO:0098772
Exons8
EggNOG OGs2CYK8@1,2S4YE@2759
EC3.2.1.21
Cds size867
CAZyGH1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1829.5674.1prot_Ecto-sp13_S_contig1829.5674.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1829 2728..8387 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462942.023332-UTR-Ecto-sp13_S_contig1829:2714..27271681462942.023332-UTR-Ecto-sp13_S_contig1829:2714..2727Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1829 2715..2727 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462942.034401-CDS-Ecto-sp13_S_contig1829:2727..29021681462942.034401-CDS-Ecto-sp13_S_contig1829:2727..2902Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1829 2728..2902 +
1681462942.0443885-CDS-Ecto-sp13_S_contig1829:3380..34521681462942.0443885-CDS-Ecto-sp13_S_contig1829:3380..3452Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1829 3381..3452 +
1681462942.0537424-CDS-Ecto-sp13_S_contig1829:4501..45731681462942.0537424-CDS-Ecto-sp13_S_contig1829:4501..4573Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1829 4502..4573 +
1681462942.0638244-CDS-Ecto-sp13_S_contig1829:4923..49951681462942.0638244-CDS-Ecto-sp13_S_contig1829:4923..4995Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1829 4924..4995 +
1681462942.0739229-CDS-Ecto-sp13_S_contig1829:5387..54591681462942.0739229-CDS-Ecto-sp13_S_contig1829:5387..5459Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1829 5388..5459 +
1681462942.0829055-CDS-Ecto-sp13_S_contig1829:6380..64431681462942.0829055-CDS-Ecto-sp13_S_contig1829:6380..6443Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1829 6381..6443 +
1681462942.0917397-CDS-Ecto-sp13_S_contig1829:7615..78471681462942.0917397-CDS-Ecto-sp13_S_contig1829:7615..7847Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1829 7616..7847 +
1681462942.1014903-CDS-Ecto-sp13_S_contig1829:8278..83871681462942.1014903-CDS-Ecto-sp13_S_contig1829:8278..8387Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1829 8279..8387 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1829.5674.1

>prot_Ecto-sp13_S_contig1829.5674.1 ID=prot_Ecto-sp13_S_contig1829.5674.1|Name=mRNA_Ecto-sp13_S_contig1829.5674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp
MALADRDALVALFRSTGGASWGRKDRWDTSAELATWCGVEVNDEGRVVRL
SLGSNNLEGHIPPQLGKLGALEGLHLSWNKLDGHIPKELGALSKLETLWL
NGNKLAGSIPPELGSLRKLSILDLASNNLSGPIPKELGGLTELEGFNLSC
NQLSALWDHTRGVQDVGQEAARTMSGGHIPSELRRLLDTLDRAERAYLDL
GSNPWAEPPESIVANGMKSVRGYFEDLYAEPCRVQRSSIKIVLVGQEGAG
KTSLRKSMKANEATLTGETKEESTVFADVEPMEIEGSSV
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mRNA from alignment at Ecto-sp13_S_contig1829:2715..8387+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1829.5674.1 ID=mRNA_Ecto-sp13_S_contig1829.5674.1|Name=mRNA_Ecto-sp13_S_contig1829.5674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5673bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1829:2715..8387+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGTTCTCTAAGTAATGGCTTTGGCGGATCGTGACGCGCTGGTTGCCCTGT
TTCGTTCGACCGGCGGCGCTAGTTGGGGTAGAAAGGACCGCTGGGATACA
TCCGCTGAGCTAGCAACATGGTGTGGAGTCGAAGTAAATGACGAGGGCCG
TGTCGTGAGGCTATCCCTGGGCAGCAACAACCTCGAAGGTTTATTTCGAC
CTCCCCTGCTTCTGACTAGGAATAGATGCGTTTGACCAGTTCAAGAGTTG
GTATTCTGAGAGTGATCCTTTCAATATGCTCAACGAATATCCATCCATGT
GTTACCAACATATTCGTTTGGTGAAAGCCACTTTTGTTTGTGTTTGAAGC
ATATTCAGATTGGGTCTCGTTTCTCTGCATGCGTAAAATAAATTCTCCTA
CACTAGTATCAATTTCCTTGATAGAGGCTCACCACTTACCCCATTAGCTG
GCTTCCTCGAAGGGAGAGCTGCTGCTGCGAATGTTCCCAGCTCCAGCGGG
ATAAGGACTGCAAACGGAAGAGAAAACCCAAAGTTTGTGGGGAAATCTGT
AGCAACAACAATTTCCCGACTTCAAAACCTATTCGTGGGCAGGTAGGTGA
TGTTCTAGAAACCTAATTCTCCGGGACTCCAATGAAGATGCCTTGCATTG
ACTTGCATATCTACAGGTCACATACCGCCGCAGCTGGGAAAGCTTGGCGC
CTTGGAAGGCCTCCACCTCAGCTGGAACAAGTTGGATGGTGAGTCGGGGA
GGAATAAAAGCGAACTTGATTGTTCCGACTTCTGCAAAAAGTGTAGGTTG
TCGACAACTTTGCAACCTACGTAGGTGTGGGCGAGTTGGCTTCTAAACCC
AGCTTCCTACATGATGGTGGAAAAATAGACTCAAGGAAGTATTCGCCTCT
TCACCGGTGAGCCTATTGTTAAGAAGAAGCGTCGCCAGCTCGCTGAGATT
CTCCAGCGCCTCGGGAACCACGTGCTTACCGTAGTCGGGACATCGTTTAC
CCTCAACCAATCATGCACATATTGCAACGTTATTCGTCCTTGCCACGCAC
CGCCATCAATTCGCCCTCAACCCCGTCGACCCGCCGACTGTCAACCAAGA
AGCTGCGTACCAGTAACAGCTGCCAAATGTTCCTTGCATACCTCCACGAC
TGACGCATCAGTTTGGTCCGCAGTACAAAAATTCAACAGGGCATTCTGTA
TACAAACGAAAATTGTGTATGCTTTGCTAGGGCCTTGTACCGCAGATCTG
CCGGCACCAGGAAACCACTGTGGTGGTAATCGGTATCACACCTTTTGGGG
ATATCACACGGGGGACTTTGGACAGCACAATGGTAGGCCGATGTCTTCCA
GATCGCACCCGTTGTAGTTATCGCACCGGGGGGGCATGCTTTGGAAAAAG
CTAGGTAGGGCGAAATTGTTTCAGTGTATTTCCGCACCACTTAGGATAGT
GTGGCACCCCTCGGGGATATGGAACCAGGGTTCTTTGAAAACAAACTTTC
GCACCCCGGTACCCTGGCCAGCACAAATGCGGTATTGGAGTTGGTGAGGC
CTCCTGTGGCGGCCGGTGGTCCCACCCAACCTTCGGTTCATTTCAAATTA
ACCTTGGGATCGTCGACCCACGTCCGGTTTTGAGTCGAGACAAGCCCAAA
GCGTACGCTACTACTCCATCGGCTTGCACAACTAGCGGCAAAGGTATGGT
GTCCCAGATCCCGCAAAAACGAACCGTTGTGATTCGCGCGCAACGGTGCG
ATAGGGGAACAATTTATTTGTTGTCGAATTTGAACAGGACACATACCCAA
GGAGCTGGGAGCCCTAAGCAAGCTGGAAACGCTTTGGCTCAACGGCAACA
AGCTTGCTGGTGAGGAATCGTATCTTTATCATTGATTTGGTCTAGAATGC
TTGGTTTTCATGTTTCTGGCACACACCTCGAAATATGTATTTTTCGTTGT
TGCACCTCCGGGGCTCACCATACAACTCGTGCCGGTCAAGGTCGAGGCAC
TCCAAGGCGGTAGTATTTCCTAGATGTGGTGGTGTGTGTCCCGTAGATAT
GCAAGTCAAAGCAAGCCATACTGTTAGAAACCCGAAAAGCAACTCGGTTG
GCTTCTCGAACATCACTTGGCTCAACCCCGCGTAGGTGTTCTAGAAGTGA
TCATCGGCATATTTTTCTGCTTTTGTGCCCGTGAATTTACGCTTGCCCTT
CCGCAATAGGCTCAATCCCACCGGAGCTGGGAAGCCTGAGAAAGCTAAGT
ATTCTTGACCTCGCGAGCAACAACCTGAGCGGTGAGCAACTCGGTGCACG
AATACAGTGGCGGTTTGCTAGAGAATTTTCCGCATGTTCCATAACGTTCC
GGATGAACTCCACCAACTGCGTGGGTGGGATTCATGCATGCGGTACTCTC
TTGGCCATTGCGGTGTATCAAAATCTCAGTATGACCCACCGCTCAGTTGG
TTTCCCTCAGGGTCGAGGCGTGCCAGTGATGCGAAATTGCCCACCCCTGA
CGGGATATAATTTACAGCGCGTATTTGATTTAGCGGTTTCTACCGTGCTT
GCCTCGCATTGCTTGTAGAACATGTGATGATCGACTCACCCAAGCGTTGG
CAGGACAAACATCGTAGAAATGTTCAGGACACGATTTTCTATTTTTCATT
TGCTGTTGTGCGGCTTTGTGCAGGGCCGATACCCAAGGAGCTGGGAGGCC
TCACCGAGCTCGAGGGGTTTAATCTGAGCTGCAATCAGCTCTCAGGTATT
AGGCGGGGGCTTTCGTTTGCGGTTGTTTCTCCGAAGCCTGCCGGTTCCAG
ACCACCTCCTCGCCTACCCGTAGGGAGGTGACATGTTCTTAAGGCCGGCG
AATACCATTCACCCCTACGCCCGACAAATAGGAAGTGACCTCTGAGCTCG
TTGTCGTGGGGCCACGGACCCCGCAGCTCGCTGAGAGCTCCTAGTGACTG
GGAATAGGCCCTACTCACGAAATTCAAAAGGGAAAACACGGCATAGAGAA
ATCACGGAATCAATTGCCGTCGACAACGTTTCCCGCCATATTCAGAAATT
CATGGCCTACTCGCCCACGCGTTGGTACTTGGTGACGCCGCCCGGCCAGT
TCTGACTTGTGCCAGAAACAAAACAGGGAAATCTGCACATACAACATGAC
AATCTACTTCGGCATGACCTGTCCCGCTATTTTTTGGTTGCTAGTGTCAA
GTTAATCTGAGGATGAGTTCAATCAACTCCCGTGTATGTAGATCCAGCAA
TAATTAATTAGTTCCACGTCCCAGGTATGTTGAATACCATGGTTTGGAAA
GTGTGCGAAGGAAAGCGATTGTCAACATGCTCGGGCGCCGAGCCAGATCC
TCTCCAATGAAACGCTTTCACAGTTTGTCATTTGCGGGAGCCAGGATCGT
GTAGACACTGGTAAATATCGTGTGTTTCGACGCAGGAATAGCTGTCAAAG
TCCCCGAATAGCACATGGTGGACGTACGTCTACGATTTCACTGCGTCTAC
GGTAGATACTGCGATGATGTCCTGAGCTACTGCACTGTCTGCTTCTCGAT
CATGCCCACGAGTTTAAACATGAATCTCATCTTTGCTGCCCCTGAGTACA
ACGGCCCCACGCCTCTCTGGTTGACGGCGTTATATATCTGTCTGGCTATC
CCGATGTGTCCATTAGCTCTCTGGGACCACACGCGTGGCGTTCAGGATGT
CGGACAGGAGGCAGCCCGTACAATGTCAGGTATGCCGACATGCAACTGTC
TCGTCCACACGGCTCTAGTGGGCCTGCGGGTGGGCGTAGCTGTATTCGGC
GCGGTTTTGCATACCTCGTTGGCTACGGGTGCATATCGCACAGGTTACCC
TCGATGCCTGCAGCAGTGCCCGGTTGGATTACTCAGCGTTTTATGAGCTC
GTGTATGGGGTAGGTTTTGGTAAGAAATGCATACAAGTAGTTGGATCGAA
AGACAGGCACAAACTCGTTTTTGCTATGCTGGTATCTAACGTCTCTGGGC
ATCAAGTTCCTGAACACCTGCTGCATCTACGGTAGTGGGATTTCTGCCGC
ACCACGATTGACGTAGAACCTTTGCCCGATGGTAAGTGTGGTCTTGTAGG
CCGACTACTGTGTGCCACACCTCCCTGTAGAAGCTACGCTCTCGTACGGT
TGAGTCTCACTTTTGTCGCCCATCGCGCGTCCATCACAACACAAAGTTGT
AGGTTGGGTGGGAACTGCTACTGTCGGTAGACTGCTCTAACCTCAACAAC
CGATCTAAGGTGAACACCGTAGTATTATAGCATGTAGTCCCGTGAATTTT
TGCACAAGACGAAGAAGAGGCCAACAGTGCTGGTACGATGCAATCGCCAG
GCTTATAGTAGGAGCGTAGGTTCGGTCCCCATCCGTCCCACCACAACTTT
TCGTAATTACACAACATTGCAGTGCTTATGCTATCCCGTGTTGCAGGCGT
CTTGCTTGCGGTAGTTTCCGTTTTCCCGGTACAGTACGGCCATCCTACGT
TAGGGAGCGTGATACTAGCCCTACATTTTGTAATGTTTGATGGGGGCCCC
TATTTTGTAGGACCCAAGGCTACCGTCTCACCACCCTACTTATGGAGTGC
GCGAATTTGGTATATCAACGCTGTGCCTCTGACATGTCGAGCACCACGAC
GGACGTGGGACTTCTGCTCGACGATATTTTGGGTCGTATATGTTCACAGT
TGGCACTGTCATATGCTGCACCTGTTTCAGTCATGCTGTGTCGCTCGAAA
ACGTCTCAACCTCGTCCATAGTCTCGTGACCATCGTAAGACCATGCTGAG
CCGGTTTCTTCGGGAAACCAATGACCTCGTGTCCACCCACCACTGGCTAG
AACAACAAGAAGGTCCCTTCCACATTCGCATGCTCCCACGTTATTCCGCA
GGTGGGCACATTCCGAGTGAGCTGCGCCGCCTACTCGACACCCTAGATCG
TGCTGAGAGAGCATACCTCGATCTCGGTAGCAATCCGTGGGCTGAGCCGC
CAGAGTCCATTGTGGCCAACGGCATGAAATCTGTCAGGGGTTATTTCGAA
GACCTGTATGCTGAACCCTGCCGGGTCCAGCGCAGCAGCATTAAGATTGT
TCTTGTCGGGCAGGAAGGCGCAGGGAAGACAAGGTCAGTGGGTCGCTGCG
GTTAGATTTCGAGAATCCATCACTTTCAACAGCATGCCGATGCGCGGCAC
AGCCTACTGTAGCTTTGATTTGACCTATACCCCCGGCGACACTTCGTTTT
CGTCGCGCCACATTGCGCGCTCAGAGCTGCAAAAATGGCGATTTGAAGGA
CCAGCAGGTTTTGCCCACGCATGGTTTCTGACCACTCGTGAAGGGCTGCA
ACGTGCCGCCCGTTGTGGTTACAATATCTGTGTTTGGACGGAGTTAATGC
GTGGTGTTGTCATACGTATTCTTGCTTGAAAGTATTGAGTCAACACGCGT
CAAAACTGTGTCGAACGATGTCGACCGACAACATGTACAGATGTACACTC
GATAATCCGTGCTCTCTGTCGTCCTTGTTGCCCATTTGTTGGAACTCGTT
TCTCCCTAATACAGCTTGCGCAAGAGCATGAAGGCAAATGAAGCAACGCT
CACGGGCGAGACAAAGGAGGAGAGCACGGTTTTCGCGGATGTGGAGCCCA
TGGAGATAGAAGGCTCATCCGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1829:2715..8387+

>mRNA_Ecto-sp13_S_contig1829.5674.1 ID=mRNA_Ecto-sp13_S_contig1829.5674.1|Name=mRNA_Ecto-sp13_S_contig1829.5674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=867bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1829:2715..8387+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTTTGGCGGATCGTGACGCGCTGGTTGCCCTGTTTCGTTCGACCGG
CGGCGCTAGTTGGGGTAGAAAGGACCGCTGGGATACATCCGCTGAGCTAG
CAACATGGTGTGGAGTCGAAGTAAATGACGAGGGCCGTGTCGTGAGGCTA
TCCCTGGGCAGCAACAACCTCGAAGGTCACATACCGCCGCAGCTGGGAAA
GCTTGGCGCCTTGGAAGGCCTCCACCTCAGCTGGAACAAGTTGGATGGAC
ACATACCCAAGGAGCTGGGAGCCCTAAGCAAGCTGGAAACGCTTTGGCTC
AACGGCAACAAGCTTGCTGGCTCAATCCCACCGGAGCTGGGAAGCCTGAG
AAAGCTAAGTATTCTTGACCTCGCGAGCAACAACCTGAGCGGGCCGATAC
CCAAGGAGCTGGGAGGCCTCACCGAGCTCGAGGGGTTTAATCTGAGCTGC
AATCAGCTCTCAGCTCTCTGGGACCACACGCGTGGCGTTCAGGATGTCGG
ACAGGAGGCAGCCCGTACAATGTCAGGTGGGCACATTCCGAGTGAGCTGC
GCCGCCTACTCGACACCCTAGATCGTGCTGAGAGAGCATACCTCGATCTC
GGTAGCAATCCGTGGGCTGAGCCGCCAGAGTCCATTGTGGCCAACGGCAT
GAAATCTGTCAGGGGTTATTTCGAAGACCTGTATGCTGAACCCTGCCGGG
TCCAGCGCAGCAGCATTAAGATTGTTCTTGTCGGGCAGGAAGGCGCAGGG
AAGACAAGCTTGCGCAAGAGCATGAAGGCAAATGAAGCAACGCTCACGGG
CGAGACAAAGGAGGAGAGCACGGTTTTCGCGGATGTGGAGCCCATGGAGA
TAGAAGGCTCATCCGTG
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