mRNA_Ecto-sp13_S_contig18213.5640.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18213.5640.1 vs. uniprot
Match: A0A6H5K9L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L6_9PHAE) HSP 1 Score: 323 bits (827), Expect = 2.870e-109 Identity = 155/166 (93.37%), Postives = 159/166 (95.78%), Query Frame = 1
Query: 1 MDVDVDKFQERELYGFGQNACGELGLGDTLERHTPTLSHTSRGKDIVDVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGAIDETVPETVPSLTKVTLREPSFQPAGRVSLVHSGNGSEHLVFVTEEGELQTCGRNDSGQLGHGEAGKGYSLPRPVAGFAGYRVTKV 498
MDVDV++FQERELYGFGQNACGELGLGDTLERHTPTLS TSRGKDIVDVTAGNELTAVLTNTGEVYSCGYN EGQCGIG IDETVPETVPSLTKV LREPSF+PAGRVSLVHSGNG EHLV VTEEG+LQTCGRNDSGQLGHGE GKGYSLPRPVAGFAGYRVTKV
Sbjct: 1 MDVDVNRFQERELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVDVTAGNELTAVLTNTGEVYSCGYNCEGQCGIGEIDETVPETVPSLTKVNLREPSFRPAGRVSLVHSGNGCEHLVLVTEEGKLQTCGRNDSGQLGHGEVGKGYSLPRPVAGFAGYRVTKV 166
BLAST of mRNA_Ecto-sp13_S_contig18213.5640.1 vs. uniprot
Match: D7G3F9_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F9_ECTSI) HSP 1 Score: 324 bits (831), Expect = 4.890e-107 Identity = 156/166 (93.98%), Postives = 160/166 (96.39%), Query Frame = 1
Query: 1 MDVDVDKFQERELYGFGQNACGELGLGDTLERHTPTLSHTSRGKDIVDVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGAIDETVPETVPSLTKVTLREPSFQPAGRVSLVHSGNGSEHLVFVTEEGELQTCGRNDSGQLGHGEAGKGYSLPRPVAGFAGYRVTKV 498
MDVD+D+FQERELYGFGQNACGELGLGDTLERHTPTLS TSRGKDIV VTAGNELTAVLTNTGEVYSCGYNSEGQCGIG IDETVPE VPSLTKVTLREPSF+PAGRVSLVHSGNGSEHLV VTEEGELQTCGRN+SGQLGHGE GKGYSLPRPVAGFAGYRVTKV
Sbjct: 1 MDVDIDRFQERELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKV 166
BLAST of mRNA_Ecto-sp13_S_contig18213.5640.1 vs. uniprot
Match: A0A7S3XQJ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQJ6_HETAK) HSP 1 Score: 161 bits (407), Expect = 1.090e-43 Identity = 83/157 (52.87%), Postives = 104/157 (66.24%), Query Frame = 1
Query: 28 ERELYGFGQNACGELGLGDTLERHTPTLSHTSRGKDIVDVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGAIDETVPETVPSLTKVTLREPSFQPAGRVSLVHSGNGSEHLVFVTEEGELQTCGRNDSGQLGHGEAGKGYSLPRPVAGFAGYRVTKV 498
+RE+Y GQN+ GELG GDT ERH P+L S GKDIV V AGNE TA+LT GEV+ CGYN GQCG+G + VP+LTK + +V+ +H+ NGSEHL+ VT++GEL +CG N GQLGHG AG Y+ PR V G+RVT+V
Sbjct: 78 QREVYTIGQNSYGELGHGDTAERHLPSLVQFSLGKDIVQVAAGNEFTAMLTAAGEVFCCGYNDSGQCGLGGT-----QRVPNLTKAEGIDHK-----KVTFIHTANGSEHLLLVTDDGELYSCGYNSKGQLGHGAAGAAYA-PRLVEALYGHRVTRV 223
BLAST of mRNA_Ecto-sp13_S_contig18213.5640.1 vs. uniprot
Match: A0A7S2V1B2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1B2_9STRA) HSP 1 Score: 153 bits (387), Expect = 8.610e-41 Identity = 81/158 (51.27%), Postives = 100/158 (63.29%), Query Frame = 1
Query: 25 QERELYGFGQNACGELGLGDTLERHTPTLSHTSRGKDIVDVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGAIDETVPETVPSLTKVTLREPSFQPAGRVSLVHSGNGSEHLVFVTEEGELQTCGRNDSGQLGHGEAGKGYSLPRPVAGFAGYRVTKV 498
+ERE+Y GQN+ GELG GDT+ERH P L+ ++GK I+ V AGNE TA+L + G VY CGYN GQCG G PS K+ E + +V ++HS NGSEHL+ VTEEGEL +CG N GQLG G G +S PR V G+RVTKV
Sbjct: 10 EEREVYTLGQNSYGELGHGDTVERHLPALADFAKGKGIIQVCAGNEFTALLGSDGSVYGCGYNDSGQCGTGGTGRC-----PSFRKIEAPELREK---KVVMIHSANGSEHLLLVTEEGELFSCGYNSKGQLGLGTNGNAFS-PRLVGALYGHRVTKV 158
BLAST of mRNA_Ecto-sp13_S_contig18213.5640.1 vs. uniprot
Match: A0A7S2RUI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUI3_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.310e-31 Identity = 73/156 (46.79%), Postives = 90/156 (57.69%), Query Frame = 1
Query: 31 RELYGFGQNACGELGLGDTLERHTPTLSHTSRGKDIVDVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGAIDETVPETVPSLTKVTLREPSFQPAGRVSLVHSGNGSEHLVFVTEEGELQTCGRNDSGQLGHGEAGKGYSLPRPVAGFAGYRVTKV 498
R+LY FGQN+ GELG GDT ERH+P L S +D+V + AGNE T +LT + V++CGYN GQC +G V V LT+V F+ RV ++H+ NG EH VTE GEL TCG N GQLGHG P V G RV +V
Sbjct: 39 RKLYSFGQNSYGELGHGDTAERHSPALVELSLKEDVVGICAGNEHTLLLTGSNTVFACGYNDSGQCAVG-----VNSRVSELTEVA----DFK-GKRVVMIHAANGCEHQCAVTELGELFTCGYNSRGQLGHGHTSP-VVRPMLVDALFGRRVLQV 183
BLAST of mRNA_Ecto-sp13_S_contig18213.5640.1 vs. uniprot
Match: A0A7S1C8F2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8F2_9STRA) HSP 1 Score: 120 bits (301), Expect = 8.410e-30 Identity = 74/159 (46.54%), Postives = 87/159 (54.72%), Query Frame = 1
Query: 25 QERELYGFGQNACGELGLGDTLERHTPTLSHTSRGKDIVDVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGAIDETVPETVPSLTKVTLREPSFQPAGRVSLVHSGNGSEHLVFVTEEGELQTCGRNDSGQLGHGEAGKGYSLPRPVAGFA--GYRVTK 495
QE + FGQNA ELG GDT+ERH PT+ RG + + AGNE + VL + G V SCGYN GQCGIG V +LT V + AG V + S NG EHLV +T +G L TCG N GQLGHG S P+ V F G RV K
Sbjct: 136 QEALVLSFGQNAYCELGHGDTVERHVPTVVEALRGHSVRQIVAGNEHSCVLCDDGSVLSCGYNDSGQCGIGQTGR-----VTTLTHVV----ELEGAG-VEYIQSANGCEHLVAITVDGSLFTCGYNARGQLGHGSTASQTS-PKLVDFFVANGKRVVK 283
BLAST of mRNA_Ecto-sp13_S_contig18213.5640.1 vs. uniprot
Match: A0A1V9YPY5_9STRA (RCC1 and BTB domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPY5_9STRA) HSP 1 Score: 120 bits (302), Expect = 7.850e-29 Identity = 66/159 (41.51%), Postives = 93/159 (58.49%), Query Frame = 1
Query: 25 QERELYGFGQNACGELGLGDTLERHTPTLSHTSRGKDIVDVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGAIDETVP-ETVPSLTKVTLREPSFQPAGRVSLVHSGNGSEHLVFVTEEGELQTCGRNDSGQLGHGEAGKGYSLPRPVAGFAGYRVTKV 498
+E +Y FGQN+ GELG GDT R P+ + GK+IVDV GNE T +L GEVY+CGYN GQCG+G + + +P+L F+ +V + +GNG EH++ +T++G++ T G N GQLGHG ++P V G +G V KV
Sbjct: 12 EEVAVYTFGQNSYGELGHGDTTTRFVPSKLDFAVGKNIVDVACGNENTILLCGNGEVYACGYNDSGQCGVGTVQRVTSFKALPAL---------FEK--QVVKLSAGNGCEHVIAITDKGDVYTFGYNARGQLGHGNTTP-VAVPTLVEGLSGKSVLKV 158
BLAST of mRNA_Ecto-sp13_S_contig18213.5640.1 vs. uniprot
Match: T0SDB9_SAPDV (BTB domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SDB9_SAPDV) HSP 1 Score: 119 bits (297), Expect = 3.750e-28 Identity = 69/158 (43.67%), Postives = 89/158 (56.33%), Query Frame = 1
Query: 25 QERELYGFGQNACGELGLGDTLERHTPTLSHTSRGKDIVDVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGAIDETVPETVPSLTKVTLREPSFQPAGRVSLVHSGNGSEHLVFVTEEGELQTCGRNDSGQLGHGEAGKGYSLPRPVAGFAGYRVTKV 498
+E ++ FGQN+ GELG GDT R PT + GK+IVDV GNE T +L + G+VY+CGYN GQCGIG T + L E +V + +GNG EH+V VTE G++ T G N GQLGHG + ++P V G G V KV
Sbjct: 7 EEVAVFTFGQNSYGELGHGDTTTRFVPTKLEFAVGKNIVDVACGNENTVLLCSNGDVYACGYNDSGQCGIG----TAQRVTSFKALMALCEK------QVVKLSAGNGCEHVVAVTETGDVYTFGYNARGQLGHGNT-QPVAVPTLVDGLVGKSVLKV 153
BLAST of mRNA_Ecto-sp13_S_contig18213.5640.1 vs. uniprot
Match: A0A067CWS2_SAPPC (BTB domain-containing protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CWS2_SAPPC) HSP 1 Score: 118 bits (296), Expect = 5.290e-28 Identity = 68/158 (43.04%), Postives = 89/158 (56.33%), Query Frame = 1
Query: 25 QERELYGFGQNACGELGLGDTLERHTPTLSHTSRGKDIVDVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGAIDETVPETVPSLTKVTLREPSFQPAGRVSLVHSGNGSEHLVFVTEEGELQTCGRNDSGQLGHGEAGKGYSLPRPVAGFAGYRVTKV 498
+E ++ FGQN+ GELG GDT R PT + GK+IVDV GNE T +L + G+VY+CGYN GQCG+G T + L E +V + +GNG EH+V VTE G++ T G N GQLGHG + ++P V G G V KV
Sbjct: 13 EEVAVFTFGQNSYGELGHGDTTTRFVPTKLEFAVGKNIVDVACGNENTVLLCSNGDVYACGYNDSGQCGVG----TAQRITSFKALMALCEK------QVVKLSAGNGCEHVVAVTESGDVYTFGYNARGQLGHGNT-QPVAVPTLVDGLVGKSVLKV 159
BLAST of mRNA_Ecto-sp13_S_contig18213.5640.1 vs. uniprot
Match: A0A6G0XKB1_9STRA (BTB domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKB1_9STRA) HSP 1 Score: 117 bits (294), Expect = 9.850e-28 Identity = 66/165 (40.00%), Postives = 90/165 (54.55%), Query Frame = 1
Query: 4 DVDVDKFQERELYGFGQNACGELGLGDTLERHTPTLSHTSRGKDIVDVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGAIDETVPETVPSLTKVTLREPSFQPAGRVSLVHSGNGSEHLVFVTEEGELQTCGRNDSGQLGHGEAGKGYSLPRPVAGFAGYRVTKV 498
+++ ++ + +Y FGQNA GELG GDT+ R PTL GK+++DV GNE T VL G+V+ CGYN GQCG+G +T + ++ V + +GNG EH+ VT+ GEL T G N GQLGHG + P V GF+ V KV
Sbjct: 4 EMNPERSSQVSVYTFGQNAYGELGHGDTIPRAVPTLVSFCEGKNVMDVACGNENTIVLCENGQVFVCGYNDSGQCGMGTTQRV--HAFKLITGLVDKQ--------VVKLSAGNGCEHVAAVTDLGELYTFGYNARGQLGHGSTAA-CAFPTRVLGFSQKSVVKV 157 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18213.5640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18213.5640.1 >prot_Ecto-sp13_S_contig18213.5640.1 ID=prot_Ecto-sp13_S_contig18213.5640.1|Name=mRNA_Ecto-sp13_S_contig18213.5640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=166bp MDVDVDKFQERELYGFGQNACGELGLGDTLERHTPTLSHTSRGKDIVDVTback to top mRNA from alignment at Ecto-sp13_S_contig18213:146..3314- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18213.5640.1 ID=mRNA_Ecto-sp13_S_contig18213.5640.1|Name=mRNA_Ecto-sp13_S_contig18213.5640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3169bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18213:146..3314- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18213:146..3314- >mRNA_Ecto-sp13_S_contig18213.5640.1 ID=mRNA_Ecto-sp13_S_contig18213.5640.1|Name=mRNA_Ecto-sp13_S_contig18213.5640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=498bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18213:146..3314- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |