mRNA_Ecto-sp13_S_contig1820.5634.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1820.5634.1 vs. uniprot
Match: D7FZS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS5_ECTSI) HSP 1 Score: 269 bits (687), Expect = 3.590e-89 Identity = 127/155 (81.94%), Postives = 139/155 (89.68%), Query Frame = 1
Query: 1 HDGYWTSDRMCAQLPAAIAMFELTNGPHRQGVFIYDNSTGHNAYDSDALLAHKINLAPGGEKVAFRVFEDDNGTTVYPTFQLGDTLLTDEKIFLPKTEAQKKIKGRRFGTGLDKKKFPVGTKVTPESPLLGLNKGGEQMLKEMRLWRLDGEKPRG 465
HDGYWTSDRMCAQLPAAIA FELT+GPHRQGV I+DNSTGHN YD DALLAHK++LAPGGEK A RVFEDDNG TV+PT QLG TLLTD+KIFLPKTEAQ+K KGR+FGTGLDKK++P GTK TP SPLLGLNKGGEQMLK M LWRLDGE+ +G
Sbjct: 7 HDGYWTSDRMCAQLPAAIATFELTHGPHRQGVSIFDNSTGHNTYDDDALLAHKMSLAPGGEKTALRVFEDDNGRTVHPTPQLGGTLLTDKKIFLPKTEAQEKTKGRKFGTGLDKKQYPFGTKATPGSPLLGLNKGGEQMLKGMGLWRLDGERAKG 161
BLAST of mRNA_Ecto-sp13_S_contig1820.5634.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 288 bits (738), Expect = 5.060e-89 Identity = 135/155 (87.10%), Postives = 147/155 (94.84%), Query Frame = 1
Query: 1 HDGYWTSDRMCAQLPAAIAMFELTNGPHRQGVFIYDNSTGHNAYDSDALLAHKINLAPGGEKVAFRVFEDDNGTTVYPTFQLGDTLLTDEKIFLPKTEAQKKIKGRRFGTGLDKKKFPVGTKVTPESPLLGLNKGGEQMLKEMRLWRLDGEKPRG 465
HDGYWTSDRMCAQLPAAIAMFEL+NGPHRQGVFI+DNSTGHNAYD DALLAHKI+LAPGGEK A RVFEDDNG TV+PTFQ+GDTLLTD+KIFLPKTEAQKK+KGR+FGTGLDKKK+PVGT+VT SPLLGLNKGGEQMLKEM LWRLDGE+ +G
Sbjct: 507 HDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKG 661
BLAST of mRNA_Ecto-sp13_S_contig1820.5634.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 271 bits (693), Expect = 2.450e-82 Identity = 129/154 (83.77%), Postives = 140/154 (90.91%), Query Frame = 1
Query: 4 DGYWTSDRMCAQLPAAIAMFELTNGPHRQGVFIYDNSTGHNAYDSDALLAHKINLAPGGEKVAFRVFEDDNGTTVYPTFQLGDTLLTDEKIFLPKTEAQKKIKGRRFGTGLDKKKFPVGTKVTPESPLLGLNKGGEQMLKEMRLWRLDGEKPRG 465
DGYWTSDRMCAQLPAA+A FELTNGPHRQGVFI+DNSTGHNAYD DALLAHKI+LAPGGEK A RVFEDDNG V+PTFQ GDTLLTD+KIFLPKT QKKIKGR+ GTGLDKK++PVGTKVT SPLLGL+KGGEQMLKEM LWRLDGE+ +G
Sbjct: 560 DGYWTSDRMCAQLPAALATFELTNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKTALRVFEDDNGRMVHPTFQDGDTLLTDKKIFLPKTPEQKKIKGRKHGTGLDKKQYPVGTKVTHGSPLLGLSKGGEQMLKEMGLWRLDGERAKG 713
BLAST of mRNA_Ecto-sp13_S_contig1820.5634.1 vs. uniprot
Match: A0A6H5JD27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD27_9PHAE) HSP 1 Score: 256 bits (654), Expect = 6.230e-78 Identity = 125/152 (82.24%), Postives = 131/152 (86.18%), Query Frame = 1
Query: 1 HDGYWTSDRMCAQLPAAIAMFELTNGPHRQGVFIYDNSTGHNAYDSDALLAHKINLAPGGEKVAFRVFEDDNGTTVYPTFQLGDTLLTDEKIFLPKTEAQKKIKGRRFGTGLDKKKFPVGTKVTPESPLLGLNKGGEQMLKEMRLWRLDGEK 456
HDGYWTSD MCAQLPA IAM ELT+GPHRQGVFI+DNSTGHN YD+DALLAH INLAPGGEKVA RVFED +G VYPTFQLGDTLLTD KIFLPKTE QKK K R+ GT LDK KFPVGTKV SPLLGLNKGGEQML+EM LWRL GEK
Sbjct: 374 HDGYWTSDDMCAQLPAIIAMAELTSGPHRQGVFIFDNSTGHNPYDADALLAHNINLAPGGEKVALRVFEDVDGKKVYPTFQLGDTLLTDRKIFLPKTEEQKKNKKRKSGTALDKDKFPVGTKVVLRSPLLGLNKGGEQMLREMGLWRLRGEK 525
BLAST of mRNA_Ecto-sp13_S_contig1820.5634.1 vs. uniprot
Match: A0A6H5KE66_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE66_9PHAE) HSP 1 Score: 194 bits (494), Expect = 2.000e-55 Identity = 100/155 (64.52%), Postives = 109/155 (70.32%), Query Frame = 1
Query: 1 HDGYWTSDRMCAQLPAAIAMFELTNGPHRQGVFIYDNSTGHNAYDSDALLAHKINLAPGGEKVAFRVFEDDNGTTVYPTFQLGDTLLTDEKIFLPKTEAQKKIKGRRFGTGLDKKKFPVGTKVTPESPLLGLNKGGEQMLKEMRLWRLDGEKPRG 465
HD YWTSDRMCA+LPA IAM ELT+GPHRQ V I+DNSTGHNAY DALLAHKIN+APGGEK A RVFEDDNG TV +KK K R+ GT LDKKKF VGTKV SPLLG+NKG EQML+EM LWRL GE+ G
Sbjct: 366 HDRYWTSDRMCARLPAIIAMVELTSGPHRQDVLIFDNSTGHNAYGEDALLAHKINMAPGGEKGALRVFEDDNGNTV-----------------------EKKQKERKNGTALDKKKFSVGTKVVAGSPLLGVNKGAEQMLREMGLWRLGGERKEG 497
BLAST of mRNA_Ecto-sp13_S_contig1820.5634.1 vs. uniprot
Match: A0A6H5KGB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB3_9PHAE) HSP 1 Score: 134 bits (337), Expect = 9.120e-34 Identity = 73/156 (46.79%), Postives = 97/156 (62.18%), Query Frame = 1
Query: 4 DGYWTSDRMCAQLPAAIAMFELTNGPHRQGVFIYDNSTGHNAYDSDALLAHKINLAPGGEKVAFRVFEDDNGTTVYPTFQLGDTLLTDEKIFLPKTEAQKKIK---GRRFGTGLDKKKFPVGTKV---TPESPLLGLNKGGEQMLKEMRLWRLDGE 453
DGYW +R+C QLPA A FEL+ P RQ + ++DNSTGHNA+ DAL A I L+ GGE+V FE NG T+Y TFQLGD L F KTE +K K G++ G FP+GT + TP L+G+ KG +++L++M L++LDGE
Sbjct: 184 DGYWDCNRLCVQLPAIFAAFELSREPGRQMLMVFDNSTGHNAFSPDALRAQNIALSAGGEQVPPHSFEY-NGRTIYTTFQLGDKLRFKTAPFARKTEEEKTAKKRNGKKLGV------FPIGTVIRQGTPSEKLVGIAKGMKEILEDMELYKLDGE 332
BLAST of mRNA_Ecto-sp13_S_contig1820.5634.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 132 bits (333), Expect = 2.140e-32 Identity = 76/167 (45.51%), Postives = 97/167 (58.08%), Query Frame = 1
Query: 4 DGYWTSDRMCAQLPAAIAMFELTNGPHRQGVFIYDNSTGHNAYDSDALLAHKINLAPGGEKVAFRVFEDDNGTTVYPTFQLGDTLLTDEKIFLPKT---------EAQKK---IKGRRFGTGLDKKKFPVGTKVTPE---SPLLGLNKGGEQMLKEMRLWRLDGEKP 459
DGYWT+DRMC Q+P IA+ ELT+ PHR V ++DNSTGH AY+ AL+A I PGG +V F DD G V+ TF+ GDT+L D ++ KT EA KK K +FG+ L F G KV S L+G KGG+Q+L EM LW + G+ P
Sbjct: 531 DGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKFGSSLGD--FKAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAP 695
BLAST of mRNA_Ecto-sp13_S_contig1820.5634.1 vs. uniprot
Match: A0A6H5JT56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT56_9PHAE) HSP 1 Score: 130 bits (327), Expect = 4.840e-32 Identity = 73/165 (44.24%), Postives = 94/165 (56.97%), Query Frame = 1
Query: 4 DGYWTSDRMCAQLPAAIAMFELTNGPHRQGVFIYDNSTGHNAYDSDALLAHKINLAPGGEKVAFRVFEDDNGTTVYPTFQLGDTLLTDEKIFLPKTE----------AQKKIKGRRFGTGLDKKKFPVGTKVTPE---SPLLGLNKGGEQMLKEMRLWRLDGEKP 459
DGYWT+DRMC Q+P IA+ ELT+ PHR V ++DNSTGH AY+ AL+A I PGG +V F DD G V+ TF+ GDT+L D ++ KT A+K K +R G F G KV S L+G KGG+Q+L EM LW + G+ P
Sbjct: 98 DGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKIGSSLGDFNAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAP 262
BLAST of mRNA_Ecto-sp13_S_contig1820.5634.1 vs. uniprot
Match: A0A6H5JRU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU6_9PHAE) HSP 1 Score: 129 bits (324), Expect = 8.950e-32 Identity = 76/167 (45.51%), Postives = 97/167 (58.08%), Query Frame = 1
Query: 4 DGYWTSDRMCAQLPAAIAMFELTNGPHRQGVFIYDNSTGHNAYDSDALLAHKINLAPGGEKVAFRVFEDDNGTTVYPTFQLGDTLLTDEKIFLPKT---------EAQKK---IKGRRFGTGLDKKKFPVGTKVTPE---SPLLGLNKGGEQMLKEMRLWRLDGEKP 459
DGYWT+DRMC Q+P IA+ ELT+ PHR V ++DNSTGH AY+ AL+A I PGG +V F DD G V+ TF+ GDT+L D ++ KT EA KK K +FG+ L F G KV S L+G KGG+Q+L EM LW + G+ P
Sbjct: 271 DGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILD-FLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKFGSSLGD--FKAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAP 434
BLAST of mRNA_Ecto-sp13_S_contig1820.5634.1 vs. uniprot
Match: A0A6H5L669_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L669_9PHAE) HSP 1 Score: 128 bits (321), Expect = 8.260e-31 Identity = 72/162 (44.44%), Postives = 94/162 (58.02%), Query Frame = 1
Query: 4 DGYWTSDRMCAQLPAAIAMFELTNGPHRQGVFIYDNSTGHNAYDSDALLAHKINLAPGGEKVAFRVFEDDNGTTVYPTFQLGDTLLTDEKIFLPKTE----AQKKI------------KGRRFGTGLDKKKFPVGTKVT-PESPLLGLNKGGEQMLKEMRLW 438
DGYW RM Q+P IA+ ELT+ PHRQ V ++DNSTGH+A+ + AL+ + L PGG + A R FEDD G V+ TF++GD L +F PKTE A+KK K ++ G L K K K T P + L+GL KGG+Q+L EM LW
Sbjct: 367 DGYWNCARMLEQIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKSKKNGKNLGKFKKDDEVKATGPTAVLIGLPKGGKQLLMEMGLW 528 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1820.5634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1820.5634.1 >prot_Ecto-sp13_S_contig1820.5634.1 ID=prot_Ecto-sp13_S_contig1820.5634.1|Name=mRNA_Ecto-sp13_S_contig1820.5634.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp MCAQLPAAIAMFELTNGPHRQGVFIYDNSTGHNAYDSDALLAHKINLAPGback to top mRNA from alignment at Ecto-sp13_S_contig1820:3813..4393- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1820.5634.1 ID=mRNA_Ecto-sp13_S_contig1820.5634.1|Name=mRNA_Ecto-sp13_S_contig1820.5634.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=581bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1820:3813..4393- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1820:3813..4393- >mRNA_Ecto-sp13_S_contig1820.5634.1 ID=mRNA_Ecto-sp13_S_contig1820.5634.1|Name=mRNA_Ecto-sp13_S_contig1820.5634.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1820:3813..4393- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |