prot_Ecto-sp13_S_contig18175.5620.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18175.5620.1
Unique Nameprot_Ecto-sp13_S_contig18175.5620.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length142
Homology
BLAST of mRNA_Ecto-sp13_S_contig18175.5620.1 vs. uniprot
Match: D7G2S2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2S2_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 7.090e-72
Identity = 111/115 (96.52%), Postives = 114/115 (99.13%), Query Frame = 0
Query:   27 MKFLGFFAVCLTAVSGFVAPTGPRLSAAVRPSTAATPMRMGLKEDVQKVANAASVAVLTAAPALATEGTGEPLGFENAQAVVVPLFFLVSINLLFNNWAKDQPDGDFFAEYDERR 141
            MKFLGFF VCLTAVSGFVAPTGPRLSAAVRPSTAATPMRMGLKEDVQKVANAASVAVLTAAPALATEGTGEPLGFEN+QAV+VPLFFLVSINLLFNNWAKDQP+GDFFAEYDERR
Sbjct:    1 MKFLGFFVVCLTAVSGFVAPTGPRLSAAVRPSTAATPMRMGLKEDVQKVANAASVAVLTAAPALATEGTGEPLGFENSQAVIVPLFFLVSINLLFNNWAKDQPEGDFFAEYDERR 115          
BLAST of mRNA_Ecto-sp13_S_contig18175.5620.1 vs. uniprot
Match: A0A835Z064_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z064_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.310e-18
Identity = 52/109 (47.71%), Postives = 65/109 (59.63%), Query Frame = 0
Query:   34 AVCLTAV-SGFVAPTGPRLSAAVRPSTAATPMRMGLKEDVQKVANAASVAVLTAAPALATEGTGEPLGFENAQAVVVPLFFLVSINLLFNNWAKDQPDGDFFAEYDERR 141
            A+C+ A  S FVAP  P    A     +A P + G    V       S A+L+AAPALATEGT E LG +N  A  VPL  + +INL+F  WA+ QP+G+FF EYDERR
Sbjct:    8 ALCMVAAASAFVAPAAPTAIRATTTVMSAAP-KAGAIATV-------SAALLSAAPALATEGTSEALGIDNPLAFWVPLTVIFAINLIFFQWARTQPEGEFFGEYDERR 108          
BLAST of mRNA_Ecto-sp13_S_contig18175.5620.1 vs. uniprot
Match: A0A835ZAY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAY3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.600e-17
Identity = 48/107 (44.86%), Postives = 61/107 (57.01%), Query Frame = 0
Query:   35 VCLTAVSGFVAPTGPRLSAAVRPSTAATPMRMGLKEDVQKVANAASVAVLTAAPALATEGTGEPLGFENAQAVVVPLFFLVSINLLFNNWAKDQPDGDFFAEYDERR 141
            V     + FVAP  P + AA       T M M     V  +A A S A+LT+AP LATEGT E  G ++     +PL  +V INL+F  WA+ QP+G+FF EYDERR
Sbjct:   13 VAAMGANAFVAPAAPTMRAA-------TVMSMSAAPKVGAIATA-SAALLTSAPVLATEGTSEAFGIDSPLGFWLPLTVIVFINLIFFQWARTQPEGEFFGEYDERR 111          
BLAST of mRNA_Ecto-sp13_S_contig18175.5620.1 vs. uniprot
Match: A0A0G4F681_VITBC (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A0G4F681_VITBC)

HSP 1 Score: 66.6 bits (161), Expect = 2.310e-11
Identity = 48/118 (40.68%), Postives = 64/118 (54.24%), Query Frame = 0
Query:   34 AVCLTAV------SGFVAPTGPRLSAAVRPSTAATPMRMGLKEDVQKVANAASVAV---LTAAPALATEGTGEPLGFENAQAVVVPLFFLVSINLLFNNWAKDQPD--GDFFAEYDER 140
            A+CL A       S    PT P L  A R   A +P+RM  + D       A++AV   L    ALATEGTGEPLG ++   ++      +S+ +LF NW+K+ PD  GDFF+EYD R
Sbjct:   11 AMCLVAQLAEAMDSAAYVPTNPLLLRARR--QAPSPLRMSAETDKLSKNLGAALAVSPLLAPLAALATEGTGEPLGVDSPLQLLAITAIPLSLGILFINWSKENPDNEGDFFSEYDRR 126          
BLAST of mRNA_Ecto-sp13_S_contig18175.5620.1 vs. uniprot
Match: A0A1X6P1X1_PORUM (PSII 6.1 kDa protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1X1_PORUM)

HSP 1 Score: 55.1 bits (131), Expect = 4.020e-7
Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   41 SGFVAPTGPRLSAAVRPSTAATPMRMGLKEDVQKVANA-ASVAVL--TAAPALATEGTGEPLGFENAQAVVVPLFFLVSINL-LFNNWAKDQPDGDFFAEYDERR 141
            S FVA +   L++  R +  AT  RM +       A A AS+A L  TAAP LATEGTGE LG +NA  + VPL  + ++ L LF  +   Q + DFF   D+RR
Sbjct:    3 SAFVATSPLLLASPRRAAATATAPRMAVAPVXXXXAQASASLAALAATAAPVLATEGTGEGLGIDNAL-LYVPLLGIPAVFLFLFLQFGSSQDNEDFFGTIDDRR 106          
BLAST of mRNA_Ecto-sp13_S_contig18175.5620.1 vs. uniprot
Match: L1JFS1_GUITC (Uncharacterized protein n=4 Tax=Guillardia theta TaxID=55529 RepID=L1JFS1_GUITC)

HSP 1 Score: 51.6 bits (122), Expect = 1.040e-5
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 0
Query:   37 LTAVSGFVAP--TGPRLSAAVRPSTAATPMRMGLKEDVQKVANAASVAVLTAAPALATEGTGEPLGFENAQA----VVVPLFFLVSINLLFNNWAKDQPDGDFFAEYDERR 141
            + A + F AP   G RL +A    +      + + E V+K    A      AAPA A EGTGE LG ++ +     +VVPLF    + LLF  +A +Q + DFF  YD+RR
Sbjct:   11 VAAAAAFTAPHSAGLRLRSATPAMSMKADSNIRIPEGVKKALAPAIAFAGAAAPAFA-EGTGEALGVDDGKLLIPIIVVPLF----VFLLFQGFAANQDNEDFFDTYDQRR 116          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18175.5620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G2S2_ECTSI7.090e-7296.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z064_9STRA1.310e-1847.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAY3_9STRA1.600e-1744.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4F681_VITBC2.310e-1140.68Uncharacterized protein n=3 Tax=Sar TaxID=2698737 ... [more]
A0A1X6P1X1_PORUM4.020e-742.86PSII 6.1 kDa protein n=1 Tax=Porphyra umbilicalis ... [more]
L1JFS1_GUITC1.040e-536.94Uncharacterized protein n=4 Tax=Guillardia theta T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..121
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 122..141
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..91
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18175contigEcto-sp13_S_contig18175:790..3317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18175.5620.1mRNA_Ecto-sp13_S_contig18175.5620.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18175 790..3317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18175.5620.1 ID=prot_Ecto-sp13_S_contig18175.5620.1|Name=mRNA_Ecto-sp13_S_contig18175.5620.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=142bp
DRSLFPLSPLLIAPVSPVTRQPFTATMKFLGFFAVCLTAVSGFVAPTGPR
LSAAVRPSTAATPMRMGLKEDVQKVANAASVAVLTAAPALATEGTGEPLG
FENAQAVVVPLFFLVSINLLFNNWAKDQPDGDFFAEYDERR*
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