mRNA_Ecto-sp13_S_contig18150.5605.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18150.5605.1 vs. uniprot
Match: A0A6H5KWE3_9PHAE (GCFC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE3_9PHAE) HSP 1 Score: 420 bits (1080), Expect = 3.700e-141 Identity = 225/233 (96.57%), Postives = 226/233 (97.00%), Query Frame = 1
Query: 1 SKKKGLFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGASEQMDYMRVVEHRRMEAATARQRDNAXXXXXXXXXXXEEARSRGPTTASFKDVVEGYAAQNG 699
S+ GLFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGASEQMDYMRVVEHRRMEAATARQ XXXXXXXXXXXEEARSRGPTTASFKDVVEGYAA NG
Sbjct: 356 SRLAGLFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGASEQMDYMRVVEHRRMEAATARQXXXXXXXXXXXXXXXEEARSRGPTTASFKDVVEGYAAHNG 588
BLAST of mRNA_Ecto-sp13_S_contig18150.5605.1 vs. uniprot
Match: D8LQD4_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD4_ECTSI) HSP 1 Score: 424 bits (1090), Expect = 4.400e-138 Identity = 230/253 (90.91%), Postives = 234/253 (92.49%), Query Frame = 1
Query: 1 SKKKGLFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGASEQMDYMRVVEHRRMEAATARQRDNAXXXXXXXXXXXEEARSRGPTTASFKDVVEGYAAQNG---------------TKVGC 714
S+ GLFPEIRRKLEAVLVHWNDVFDSTVYVILSPWK+VFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPE LRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGASEQMDYMRVVEHRRMEAAT RQR+NAXXXXXXXXXXXE+ARSRGPTTASFKDVVEGYAAQNG TKVGC
Sbjct: 786 SRLAGLFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKNVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPERLRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGASEQMDYMRVVEHRRMEAATVRQRENAXXXXXXXXXXXEQARSRGPTTASFKDVVEGYAAQNGVMFVPKPGRQHEGKQTKVGC 1038
BLAST of mRNA_Ecto-sp13_S_contig18150.5605.1 vs. uniprot
Match: A0A2V0PC38_9CHLO (G-patch domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PC38_9CHLO) HSP 1 Score: 144 bits (363), Expect = 2.430e-35 Identity = 75/168 (44.64%), Postives = 101/168 (60.12%), Query Frame = 1
Query: 13 GLFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGAS 516
+P IR +L A L W+ DS +L+PW+ FD+ +ALL + VAPKL L+ LVINPA QD++PF+ +M W LL M ++L+ FFPKWL VL WL+ + DY EV WY WK FP+SL PRV + F+AAL++M+ G PLPA A+
Sbjct: 694 AFYPTIRHRLSAALTAWHPADDSA-RALLAPWRRAFDAGDWDALLGRSVAPKLALALQ-ELVINPAAQDLSPFNWVMAWEGLLAGQQMAALLEQGFFPKWLAVLRHWLTASPDYDEVTRWYLAWKGLFPQSLLDQPRVRSNFNAALNMMNAAAD-----GAPLPAAAA 854
BLAST of mRNA_Ecto-sp13_S_contig18150.5605.1 vs. uniprot
Match: A0A7S3QTZ3_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QTZ3_DUNTE) HSP 1 Score: 141 bits (355), Expect = 2.700e-34 Identity = 72/149 (48.32%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 16 LFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMD 462
L+P IR KL L W+ DS+ V+L PW VFD+ +ALL + + PKL L+A +NP QDMAPF +M W ++LP +M ++LDV FFPKW VLH WLS T +Y EV WY GWK FP L RV QF+AAL++M+
Sbjct: 590 LYPVIRHKLGVALQAWHPS-DSSALVLLRPWHRVFDASEWDALLLRCIVPKLAMALQA-FAVNPVAQDMAPFQWVMGWNEVLPHHHMAALLDVGFFPKWHQVLHYWLSHTPNYDEVTAWYLGWKAAFPPGLLDHERVRRQFNAALNMMN 736
BLAST of mRNA_Ecto-sp13_S_contig18150.5605.1 vs. uniprot
Match: A0A5J4XK29_9CHLO (Tuftelin-interacting 11-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XK29_9CHLO) HSP 1 Score: 137 bits (345), Expect = 5.820e-33 Identity = 66/153 (43.14%), Postives = 93/153 (60.78%), Query Frame = 1
Query: 16 LFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMDQVMQ 474
L+P IR KL L W+ D + +LSPW VFD++ +AL+ + + PKL L+ LVINP QD+APF L +W +LP +M ++L+ FFP W VLH WLS D+ EV WY GWK FP+ L R+ AQF++AL+ M+ ++
Sbjct: 587 LYPGIRFKLSTALQQWHPS-DQSALALLSPWHTVFDAKDWDALVMRSIVPKLAWALQDVLVINPLQQDLAPFHWLTVWHAVLPQHHMVNLLEFRFFPAWHRVLHHWLSSQPDFEEVTRWYLGWKSLFPQDLADHERIRAQFTSALNSMNHAVE 738
BLAST of mRNA_Ecto-sp13_S_contig18150.5605.1 vs. uniprot
Match: UPI000A1C4930 (tuftelin-interacting protein 11 n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C4930) HSP 1 Score: 135 bits (341), Expect = 1.940e-32 Identity = 84/236 (35.59%), Postives = 130/236 (55.08%), Query Frame = 1
Query: 1 SKKKGLFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGASEQMDYMRVVEHRR-MEAATARQRDNAXXXXXXXXXXXEEARSRGPTTA---SFKDVVEGYAAQN 696
S+ + L+P IR KL L W+ D++ +IL PWK VF + EA + K + PKL L LVINP Q M PF+ +++W +L P + S+LD FFPKWL VL WLS + +Y E+ WY GWK F ++L + P + +F+ AL +M++ + +GV + GA E + Y+ E R+ + ++R +A E +RG +T+ +FKD+V+ A +N
Sbjct: 557 SRLEPLYPPIRSKLSNALQRWHPS-DASARLILQPWKDVFTPGAWEAFMVKNIIPKLALCLE-ELVINPHQQQMDPFNWVIVWEGMLSPSSLVSLLDKNFFPKWLQVLCSWLSNSPNYEEITKWYLGWKGMFSDALLTQPPIKEKFNEALDIMNRAVSSG--VGVYMQPGARENIAYLTQTERRKDFQYEALQERRDA-----------ESVATRGFSTSGPTNFKDLVQAKAEEN 777
BLAST of mRNA_Ecto-sp13_S_contig18150.5605.1 vs. uniprot
Match: A0A3P8W6H2_CYNSE (Tuftelin-interacting protein 11 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8W6H2_CYNSE) HSP 1 Score: 134 bits (336), Expect = 9.060e-32 Identity = 87/242 (35.95%), Postives = 123/242 (50.83%), Query Frame = 1
Query: 1 SKKKGLFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGASEQMDYMRVVE----------HRRMEAATARQRDNAXXXXXXXXXXXEEARSRGPTTASFKDVVEGYAAQN 696
S+ + L+P IR KL L W+ DS+ +IL PWK VF + EA + K + PKL L LVINP Q M PF +M W +L P + S+LD FFPKWL VL WLS +Y E+ WY GWK F ++L + P + +F+ AL +M++ + +G + GA E + Y+ E H R EA + QR + S GPT +FKD+++ A +N
Sbjct: 562 SRLEPLYPPIRSKLSNALQRWHPS-DSSARLILQPWKDVFTPGAWEAFMVKNIIPKLALCLE-ELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLLDKNFFPKWLQVLCSWLSNNPNYEEITKWYLGWKSMFSDALLAQPVIKEEFNEALDIMNRAVST--AMGGYMQPGARENIAYLTQTERRKDFQYEAMHERREAESVAQRGVS---------------SSGPT--NFKDLIQTKAEEN 782
BLAST of mRNA_Ecto-sp13_S_contig18150.5605.1 vs. uniprot
Match: A0A843U0H8_COLES (G-patch domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843U0H8_COLES) HSP 1 Score: 134 bits (336), Expect = 9.250e-32 Identity = 81/229 (35.37%), Postives = 122/229 (53.28%), Query Frame = 1
Query: 16 LFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGASEQMDYMRVVEHRRMEAATARQRDNAXXXXXXXXXXXEEARSRGPTTA-SFKDVVEGYAAQNG 699
L+ I KL VL W+ D++ + ILSPWK VFD+ S L+ + + PKL+ L+ INPANQ + F+ +M WA ++P YM ++L+ EFF KWL L+ WL ++ EV W+ GWK FP+ L ++ R+ Q + L +M+Q ++ + V P GA E + Y+RV E R+ EA + S G + S KD +E +A +NG
Sbjct: 588 LYSTITIKLGIVLRAWH-ASDASAHAILSPWKDVFDAGSWNRLICERIVPKLMEALKG-FEINPANQKLDQFNWVMTWASVIPIDYMATLLEAEFFTKWLQALYIWLCSNPNFNEVTEWFLGWKGLFPQELLANERIRRQLNRGLDMMNQAVEG---MEVVQP-GARENVSYLRVTEKRQFEAQQQAAASASYQHISGVFGNGAHVDSTGTSAQISLKDHIEAFAVENG 810
BLAST of mRNA_Ecto-sp13_S_contig18150.5605.1 vs. uniprot
Match: A0A0K9NQ04_ZOSMR (Putative Tuftelin interacting protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NQ04_ZOSMR) HSP 1 Score: 134 bits (336), Expect = 9.350e-32 Identity = 82/233 (35.19%), Postives = 131/233 (56.22%), Query Frame = 1
Query: 16 LFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGASEQMDYMRVVEHRRMEAATARQRDNAXXXXXXXXXXXEEARSRGPTTA-----SFKDVVEGYAAQNG 699
L+ IR KL VL W+ D++ Y++LSPWK VFD+ + E L+ +++ PKL+ L+ INP NQ++ F+ +M WA ++P +M ++L+V FF KW V++ WLS ++ EV W+ GWK FP L ++ R+ Q +A L +M+Q + D ++ P GA E ++++RV E R+ EA +Q+ A E R + + K+ VE YA +NG
Sbjct: 610 LYHTIRFKLGNVLHAWH-AHDASAYIMLSPWKDVFDAGNWEQLIVRYIVPKLMIALQ-EFQINPNNQNLDHFNWVMRWASVIPIHHMVTMLEVGFFTKWKQVVYTWLSSNPNFNEVMQWFLGWKSLFPPELLANERIRLQLNAGLDMMNQAV-DGMQIVQP---GARENINFLRVSEKRQFEA---QQQQAAVRASYHNSSVISENGIRMDVSTDIPEMTLKETVEAYAVENG 833
BLAST of mRNA_Ecto-sp13_S_contig18150.5605.1 vs. uniprot
Match: A0A2L2YLM0_PARTP (Tuftelin-interacting protein 11 (Fragment) n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YLM0_PARTP) HSP 1 Score: 128 bits (321), Expect = 2.530e-31 Identity = 73/177 (41.24%), Postives = 102/177 (57.63%), Query Frame = 1
Query: 16 LFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSILDVEFFPKWLTVLHRWLSETADYAEVALWYQGWKDRFPESLRSDPRVMAQFSAALSLMDQVMQDHQRLGVPLPAGASEQMDYMRVVE 546
L+ IR KL + LV+W+ D + +IL PWK VF MEA + + PKLVA ++ + VINP Q + ++ +M W D++P M +IL+ FFPKWL VL+ WL+ + +Y EV WY GWK P SL P + QF AL +M++ + Q L P GA E M Y+ VE
Sbjct: 72 LYAPIRHKLASALVNWHPS-DCSAKLILEPWKGVFSQGVMEAFVVTNIVPKLVAVMQ-TYVINPHQQHLDVWNWVMAWFDMMPEPCMVTILEKNFFPKWLQVLYTWLTHSPNYEEVTKWYTGWKSMLPPSLHHHPIIKEQFRQALDIMNRAVSAPQGLLGQQP-GAKESMAYLTNVE 245 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18150.5605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18150.5605.1 >prot_Ecto-sp13_S_contig18150.5605.1 ID=prot_Ecto-sp13_S_contig18150.5605.1|Name=mRNA_Ecto-sp13_S_contig18150.5605.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp MEALLSKFVAPKLVAGLRASLVINPANQDMAPFDMLMMWADLLPPLYMTSback to top mRNA from alignment at Ecto-sp13_S_contig18150:389..3069+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18150.5605.1 ID=mRNA_Ecto-sp13_S_contig18150.5605.1|Name=mRNA_Ecto-sp13_S_contig18150.5605.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2681bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18150:389..3069+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18150:389..3069+ >mRNA_Ecto-sp13_S_contig18150.5605.1 ID=mRNA_Ecto-sp13_S_contig18150.5605.1|Name=mRNA_Ecto-sp13_S_contig18150.5605.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=615bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18150:389..3069+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |