prot_Ecto-sp13_S_contig18126.5587.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18126.5587.1
Unique Nameprot_Ecto-sp13_S_contig18126.5587.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length109
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18126.5587.1 vs. uniprot
Match: A0A6H5KVN8_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVN8_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 6.470e-57
Identity = 103/109 (94.50%), Postives = 106/109 (97.25%), Query Frame = 0 
Query:    1 QRHNLLLSTNARINAEVVATVRSVVIAIERSKLCRVLRLDTEFVLDGNDELWLVGVTSCTVAARPTISGAQELGDNGPRGASFLQEEERALATELRHRKHEADQISGVL 109
            QRHNLLLS NARINAEVVATVRSVVIAIERSK CRVLRLDTEFVLDGNDELWLVGVT CTVAARPTISGAQELGDNGP+GASFL+EEERALATELRHRKHEADQI+GVL
Sbjct:  231 QRHNLLLSKNARINAEVVATVRSVVIAIERSKHCRVLRLDTEFVLDGNDELWLVGVTCCTVAARPTISGAQELGDNGPQGASFLKEEERALATELRHRKHEADQIAGVL 339
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BLAST of mRNA_Ecto-sp13_S_contig18126.5587.1 vs. uniprot
Match: D8LEN9_ECTSI (Membrane acyl-CoA binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN9_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 1.260e-54
Identity = 100/109 (91.74%), Postives = 103/109 (94.50%), Query Frame = 0 
Query:    1 QRHNLLLSTNARINAEVVATVRSVVIAIERSKLCRVLRLDTEFVLDGNDELWLVGVTSCTVAARPTISGAQELGDNGPRGASFLQEEERALATELRHRKHEADQISGVL 109
            QR NLLLS NARIN EVVATVRSVVIAIERSKLCRVLRLDTEFVLDGNDELWLVGVT CTVAAR TISGAQ+LGDNGP+GASFL+EEER LATELRHRKHEADQISGVL
Sbjct:  199 QRQNLLLSKNARINTEVVATVRSVVIAIERSKLCRVLRLDTEFVLDGNDELWLVGVTCCTVAARSTISGAQQLGDNGPQGASFLKEEERTLATELRHRKHEADQISGVL 307
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18126.5587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVN8_9PHAE6.470e-5794.50SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LEN9_ECTSI1.260e-5491.74Membrane acyl-CoA binding protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18126contigEcto-sp13_S_contig18126:476..802 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18126.5587.1mRNA_Ecto-sp13_S_contig18126.5587.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18126 476..803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18126.5587.1 ID=prot_Ecto-sp13_S_contig18126.5587.1|Name=mRNA_Ecto-sp13_S_contig18126.5587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=109bp
QRHNLLLSTNARINAEVVATVRSVVIAIERSKLCRVLRLDTEFVLDGNDE
LWLVGVTSCTVAARPTISGAQELGDNGPRGASFLQEEERALATELRHRKH
EADQISGVL
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