mRNA_Ecto-sp13_S_contig18125.5585.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A6H5KWR4_9PHAE (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWR4_9PHAE) HSP 1 Score: 432 bits (1111), Expect = 9.660e-147 Identity = 215/219 (98.17%), Postives = 218/219 (99.54%), Query Frame = 2
Query: 2 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSPSDFGLFQAGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDKKGKPNASERVQASAKFFQDSI 658
QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRS SDFGLFQAGEAEETLSEF+VTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWD+SPPTNDQVESAVFDKKGKPNASERVQASAKFFQDS+
Sbjct: 122 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSSSDFGLFQAGEAEETLSEFEVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDRSPPTNDQVESAVFDKKGKPNASERVQASAKFFQDSL 340
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A6V1R6U0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R6U0_HETAK) HSP 1 Score: 172 bits (437), Expect = 3.830e-46 Identity = 89/233 (38.20%), Postives = 141/233 (60.52%), Query Frame = 2
Query: 2 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEG------------ASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSPSDFGLFQAGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSP--PTNDQVESAVFDKKGKPNASERVQASAKFFQDSI 658
+A +DG TRQ +++ LPLIG TE+DDWPGG +Q+Y+AC PMV S+L+ E I+ Q++D DAVG++Q Q + K D +IFP T+++ + +Q++ AG+RL LVNP W+ +DFG F +A++ L ++ +Y +QSL+VYG ++RLL YP PW+LF E +G L+ + + P +E + K G+ + +ER+Q S F +D++
Sbjct: 89 RAFNDGITRQQVKIELPLIGATELDDWPGGIKQQYQACEPMVISLLKKLAKLDEDDLNENEQKTTTQPQILSQVIDADDAVGVLQAQSSDPKKDKLAVIFPNTESIKVLKQLSESAGNRLKLLVNPQWKRVADFGFFGQQDAKKFLEPYERSYHIQSLLVYGRSVRLLRRYPDPWQLFSFDEKTGDSTLIHVFQEGKDVPEYKVIEDILDRKYGRMSVAERIQQSTDFIKDTL 321
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A7S1D696_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D696_CYCTE) HSP 1 Score: 131 bits (329), Expect = 3.070e-31 Identity = 78/248 (31.45%), Postives = 123/248 (49.60%), Query Frame = 2
Query: 2 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAG-SRLVALVNPAWRSPSDFGLFQAGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSG--------KRELLGS------------------WDQSPPTNDQVESAVFDKKG--KPNASERVQASAKFFQDSI 658
+A DG R +RL LPLIG TE+DDWPGG RQ +A P++E++L A + + + +LDESD V + Q EAKDD+ ++ P+ DT+ Q + G +R + + NP W+ SDFG F + F T+ +L+V G R+L +PGPWR+F+ + G +E L + +D PT ++ + ++G P +ER A+ F +D++
Sbjct: 26 RATEDGLHRHSVRLLLPLIGATELDDWPGGSRQMIEAAYPLMENILTNTGAER----VSQSVLDESDGVRAIMAQATEAKDDSCAVLLPSADTIPQLQTLEKQVGDTRNLVIANPQWKRQSDFGFFGRKNKIDFAETFVPTFHCTNLIVEGQQARILRSHPGPWRVFVSEDQRGVIEWKEIGSKEFLATKPEGWNGKAANSKDGGRLFDYGQPTYQEISEMIVSQEGYRPPTVTERAAAAFTFNKDAL 269
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A1Y1I3J2_KLENI (DUF1995 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3J2_KLENI) HSP 1 Score: 129 bits (324), Expect = 2.270e-30 Identity = 76/221 (34.39%), Postives = 133/221 (60.18%), Query Frame = 2
Query: 2 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSP---SDFGLFQAGEA-EETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDKKGKPNAS---ERVQASAKF 643
+A++DGKTR + L LPLIG T++DDWPGG +Q++KA P+V S+LRG + + +LDE+DAVG+ + D ++++FP +T+ +++AA G L+ ++NP W++ SDFG +A E+ L+ F+ Y LQ + G +R+L CYPGP++++LI + GK +++ S ++ PT ++++ + + G + E++ KF
Sbjct: 68 RAIADGKTRLQIELLLPLIGATDLDDWPGGIKQQFKAAVPLVYSLLRGLVGTSSAEASKKTLLDEADAVGVWE------SDSVALVLFPNAETVPDLERLAAVEGRPLL-IMNPQWQAGQVISDFGFGARKQASEDFLATFEPAYQLQQKRIQGEDVRILRCYPGPYQVYLIDD-RGKSDVVTS-SETLPTYKEIDALLRGRVGSRASKSWLEKLMGETKF 279
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A6T7UM00_9CHLO (Hypothetical protein n=2 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A6T7UM00_9CHLO) HSP 1 Score: 125 bits (314), Expect = 1.980e-28 Identity = 84/225 (37.33%), Postives = 126/225 (56.00%), Query Frame = 2
Query: 5 ALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAW---RSPSDFGLFQAGEAEET-LSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDKKGK-PNAS--ERVQASAKFFQDSI 658
A++DGK + LPLIG T++DDWPGG RQ +KA PMVE +LR + +ILD++DA+GL + K A+V+ FPT DT+ +A SR + VN W + SDFG E E+ ++ F+ Y L+S V G +R+L YPG W+++ I E +G+ EL+G D + PT ++E+ + ++G N S +R+ A KF DS+
Sbjct: 123 AIADGKILVDVEFVLPLIGATDLDDWPGGVRQMFKAAAPMVEEILRNILGVMDKGGCRTEILDQADAIGLW-----DGKGIAAVL-FPTADTVDEIMDLAKKDRSRPIITVNKQWTYGQVISDFGFGPWRERRESFINSFEPAYCLKSFRVLGENVRILRGYPGTWKVYAISE-AGEAELVGDQD-AQPTYKELEAMLRAREGSISNQSIFQRLSAEFKFNADSL 339
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A176WGM7_MARPO (DUF1995 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WGM7_MARPO) HSP 1 Score: 124 bits (312), Expect = 8.760e-28 Identity = 76/192 (39.58%), Postives = 111/192 (57.81%), Query Frame = 2
Query: 2 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRG---NPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSP---SDFGL-FQAGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSP 556
QA+ DG R L + LPLIG T++DDWPGG +Q++KA GP+V S+L G + K I+D+SDAVG + DDA++++FPT ++L Q +AA R + LVN W+S SDFG Q EE ++ F+V Y L+ + + G LRLL YPG W++F++ + +G E + Q P
Sbjct: 172 QAIKDGIKRMQLEVLLPLIGATDLDDWPGGIQQQFKAAGPVVTSLLSGLVDSDNYKAEGGYRSYIIDDSDAVGAWE------NDDAALVLFPTAESLDSVQALAAAKEDRPLLLVNVQWQSGQVISDFGFGAQKRSREEFVNSFEVVYFLKQMRMLGEDLRLLKRYPGDWQVFVM-DAAGGSECVAVEPQRP 356
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: D8UJ99_VOLCA (DUF1995 domain-containing protein n=3 Tax=Volvox TaxID=3066 RepID=D8UJ99_VOLCA) HSP 1 Score: 119 bits (297), Expect = 6.420e-27 Identity = 83/228 (36.40%), Postives = 122/228 (53.51%), Query Frame = 2
Query: 5 ALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKE-GASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGS-RLVALVNPAWRSP----SDFGLFQA-GEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDK-KGKPNAS--ERVQASAKFFQDSI 658
A DG Q L L LPLIG T++DDWPGG RQ++KA PMVESVLR K + I D+ DAVG + + ++FPT TL Q+ G + LV +VNP W + SDFG Q EAE ++ F TY L+ L VYG ++R L +P W++ ++ G G + + + D+ P + ++E+ + D+ + N S +R++ F QDS+
Sbjct: 30 AWRDGVRLQRLELLLPLIGATDLDDWPGGIRQQFKAAQPMVESVLRTVKQIKGLQGPLAANIWDQGDAVGAW------TGKNLACVLFPTAGTLDKLTQLCNGPDAPELVLIVNPQWETRGNLVSDFGFGQRKAEAERFINSFQPTYCLKQLRVYGDSIRTLKAHPNRWQVHVVDRG-GSSDCIATRDEQP-SYQEIEALLRDRPESMMNKSIFDRIKIEFAFNQDSL 249
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A835WHR4_9CHLO (DUF1995 domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WHR4_9CHLO) HSP 1 Score: 119 bits (298), Expect = 9.830e-27 Identity = 82/229 (35.81%), Postives = 122/229 (53.28%), Query Frame = 2
Query: 5 ALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGAS--IVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGS-RLVALVNPAWRSP----SDFGLFQAGEAEET-LSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDKKG---KPNASERVQASAKFFQDSI 658
A DG RQ L LSLPLIG T++DDWPGG RQ++KA PMVES+LR EG + I D+ DAVG + + ++FPT TL ++ G + LV +VNP W + SDFG EA E ++ F TYSL+ VYG LR L YP W++ L+ +G E + + ++ P+ ++E+ + D+ + +R+Q +F ++S+
Sbjct: 63 AWRDGIKRQRLELSLPLIGATDLDDWPGGIRQQFKAAQPMVESILR-TVKQVEGLQGPLAANIWDQGDAVGAW------TGKNLACVLFPTASTLDRLNKLCTGPDAPELVLIVNPQWETRGNLVSDFGFGARKEASERFIASFADTYSLRQWRVYGDQLRTLRAYPNRWQVHLV-QGRNASECIAT-REAAPSYQEIEALLRDRPDAMMNKSIFDRIQTEFRFNEESL 282
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A4RU68_OSTLU (DUF1995 domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RU68_OSTLU) HSP 1 Score: 117 bits (292), Expect = 4.390e-26 Identity = 79/229 (34.50%), Postives = 117/229 (51.09%), Query Frame = 2
Query: 5 ALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSPS----DFGLFQ-AGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKR---ELLGSWDQSPPTNDQVESAVFDKKGK---PNASERVQASAKFFQDSI 658
AL DGKT Q + L+LPLIG T++DDWPGG RQ+Y A PMV VLR A EG + ++++D++DAV + L V+ FPT + L + + RL + NP W + DFG AEE + +F+ TY L+ + G +R L YP W++F + + E LG +D+ P DQ++ + ++G N ER + A F S+
Sbjct: 40 ALRDGKTTQAIELNLPLIGATDLDDWPGGIRQQYGALAPMVSEVLRLINAGAEG-TCQQRVIDDADAVAALTL------GSDVVVSFPTAEVLDDLRAIENKNDFRLKIIANPQWNTKGAIIGDFGFGPWKRRAEEFVGKFEQTYYLKEQRIQGEIVRTLKVYPNKWQVFALAPNENNKIVAEALGEFDERP-LYDQLKKLLESREGSIAAMNWVERAKREATFNAKSL 260
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A0D6QZW1_ARACU (DUF1995 domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QZW1_ARACU) HSP 1 Score: 117 bits (292), Expect = 6.790e-26 Identity = 77/228 (33.77%), Postives = 126/228 (55.26%), Query Frame = 2
Query: 5 ALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRG---NPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSP---SDFGLFQAGEAEETLSE-FDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDKKGKPNASE---RVQASAKFFQDSI 658
A+ DG TR L LPLIG T++DDWPGG +Q++KA P+V S+L G + AA S LDE DA G+ + KD+ ++++FPT ++L + + +R + L+NP W++ SDFG + + E L E F Y L+ + + G +RLL YPG W++F+I +G G + + + ++ P+ +++ + ++KG R+ KF QDS+
Sbjct: 68 AIEDGSTRLQLEFLLPLIGATDLDDWPGGIQQQFKAAVPVVSSLLNGIIEDEAAAADNSYKIYFLDEGDATGVWE------KDEIALVLFPTAESLPAIENLEK-IKNRPLLLLNPQWQAGQVISDFGFGEQRKQREKLVESFSTVYFLKQVRILGEDVRLLKTYPGDWQVFVIDKG-GSIDCIAT-EEEKPSYKRLQDILKERKGSVANKGWFGRLMNELKFNQDSL 286 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18125.5585.1 >prot_Ecto-sp13_S_contig18125.5585.1 ID=prot_Ecto-sp13_S_contig18125.5585.1|Name=mRNA_Ecto-sp13_S_contig18125.5585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp MVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTback to top mRNA from alignment at Ecto-sp13_S_contig18125:115..3500- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18125.5585.1 ID=mRNA_Ecto-sp13_S_contig18125.5585.1|Name=mRNA_Ecto-sp13_S_contig18125.5585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3386bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18125:115..3500- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18125:115..3500- >mRNA_Ecto-sp13_S_contig18125.5585.1 ID=mRNA_Ecto-sp13_S_contig18125.5585.1|Name=mRNA_Ecto-sp13_S_contig18125.5585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=540bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18125:115..3500- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |