mRNA_Ecto-sp13_S_contig18125.5585.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18125.5585.1
Unique NamemRNA_Ecto-sp13_S_contig18125.5585.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A6H5KWR4_9PHAE (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWR4_9PHAE)

HSP 1 Score: 432 bits (1111), Expect = 9.660e-147
Identity = 215/219 (98.17%), Postives = 218/219 (99.54%), Query Frame = 2
Query:    2 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSPSDFGLFQAGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDKKGKPNASERVQASAKFFQDSI 658
            QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRS SDFGLFQAGEAEETLSEF+VTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWD+SPPTNDQVESAVFDKKGKPNASERVQASAKFFQDS+
Sbjct:  122 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSSSDFGLFQAGEAEETLSEFEVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDRSPPTNDQVESAVFDKKGKPNASERVQASAKFFQDSL 340          
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A6V1R6U0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R6U0_HETAK)

HSP 1 Score: 172 bits (437), Expect = 3.830e-46
Identity = 89/233 (38.20%), Postives = 141/233 (60.52%), Query Frame = 2
Query:    2 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEG------------ASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSPSDFGLFQAGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSP--PTNDQVESAVFDKKGKPNASERVQASAKFFQDSI 658
            +A +DG TRQ +++ LPLIG TE+DDWPGG +Q+Y+AC PMV S+L+      E               I+ Q++D  DAVG++Q Q  + K D   +IFP T+++ + +Q++  AG+RL  LVNP W+  +DFG F   +A++ L  ++ +Y +QSL+VYG ++RLL  YP PW+LF   E +G   L+  + +    P    +E  +  K G+ + +ER+Q S  F +D++
Sbjct:   89 RAFNDGITRQQVKIELPLIGATELDDWPGGIKQQYQACEPMVISLLKKLAKLDEDDLNENEQKTTTQPQILSQVIDADDAVGVLQAQSSDPKKDKLAVIFPNTESIKVLKQLSESAGNRLKLLVNPQWKRVADFGFFGQQDAKKFLEPYERSYHIQSLLVYGRSVRLLRRYPDPWQLFSFDEKTGDSTLIHVFQEGKDVPEYKVIEDILDRKYGRMSVAERIQQSTDFIKDTL 321          
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A7S1D696_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D696_CYCTE)

HSP 1 Score: 131 bits (329), Expect = 3.070e-31
Identity = 78/248 (31.45%), Postives = 123/248 (49.60%), Query Frame = 2
Query:    2 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAG-SRLVALVNPAWRSPSDFGLFQAGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSG--------KRELLGS------------------WDQSPPTNDQVESAVFDKKG--KPNASERVQASAKFFQDSI 658
            +A  DG  R  +RL LPLIG TE+DDWPGG RQ  +A  P++E++L    A +    + + +LDESD V  +  Q  EAKDD+  ++ P+ DT+   Q +    G +R + + NP W+  SDFG F      +    F  T+   +L+V G   R+L  +PGPWR+F+  +  G         +E L +                  +D   PT  ++   +  ++G   P  +ER  A+  F +D++
Sbjct:   26 RATEDGLHRHSVRLLLPLIGATELDDWPGGSRQMIEAAYPLMENILTNTGAER----VSQSVLDESDGVRAIMAQATEAKDDSCAVLLPSADTIPQLQTLEKQVGDTRNLVIANPQWKRQSDFGFFGRKNKIDFAETFVPTFHCTNLIVEGQQARILRSHPGPWRVFVSEDQRGVIEWKEIGSKEFLATKPEGWNGKAANSKDGGRLFDYGQPTYQEISEMIVSQEGYRPPTVTERAAAAFTFNKDAL 269          
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A1Y1I3J2_KLENI (DUF1995 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3J2_KLENI)

HSP 1 Score: 129 bits (324), Expect = 2.270e-30
Identity = 76/221 (34.39%), Postives = 133/221 (60.18%), Query Frame = 2
Query:    2 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSP---SDFGLFQAGEA-EETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDKKGKPNAS---ERVQASAKF 643
            +A++DGKTR  + L LPLIG T++DDWPGG +Q++KA  P+V S+LRG        +  + +LDE+DAVG+ +       D  ++++FP  +T+   +++AA  G  L+ ++NP W++    SDFG     +A E+ L+ F+  Y LQ   + G  +R+L CYPGP++++LI +  GK +++ S  ++ PT  ++++ +  + G   +    E++    KF
Sbjct:   68 RAIADGKTRLQIELLLPLIGATDLDDWPGGIKQQFKAAVPLVYSLLRGLVGTSSAEASKKTLLDEADAVGVWE------SDSVALVLFPNAETVPDLERLAAVEGRPLL-IMNPQWQAGQVISDFGFGARKQASEDFLATFEPAYQLQQKRIQGEDVRILRCYPGPYQVYLIDD-RGKSDVVTS-SETLPTYKEIDALLRGRVGSRASKSWLEKLMGETKF 279          
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A6T7UM00_9CHLO (Hypothetical protein n=2 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A6T7UM00_9CHLO)

HSP 1 Score: 125 bits (314), Expect = 1.980e-28
Identity = 84/225 (37.33%), Postives = 126/225 (56.00%), Query Frame = 2
Query:    5 ALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAW---RSPSDFGLFQAGEAEET-LSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDKKGK-PNAS--ERVQASAKFFQDSI 658
            A++DGK    +   LPLIG T++DDWPGG RQ +KA  PMVE +LR      +      +ILD++DA+GL      + K  A+V+ FPT DT+     +A    SR +  VN  W   +  SDFG     E  E+ ++ F+  Y L+S  V G  +R+L  YPG W+++ I E +G+ EL+G  D + PT  ++E+ +  ++G   N S  +R+ A  KF  DS+
Sbjct:  123 AIADGKILVDVEFVLPLIGATDLDDWPGGVRQMFKAAAPMVEEILRNILGVMDKGGCRTEILDQADAIGLW-----DGKGIAAVL-FPTADTVDEIMDLAKKDRSRPIITVNKQWTYGQVISDFGFGPWRERRESFINSFEPAYCLKSFRVLGENVRILRGYPGTWKVYAISE-AGEAELVGDQD-AQPTYKELEAMLRAREGSISNQSIFQRLSAEFKFNADSL 339          
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A176WGM7_MARPO (DUF1995 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WGM7_MARPO)

HSP 1 Score: 124 bits (312), Expect = 8.760e-28
Identity = 76/192 (39.58%), Postives = 111/192 (57.81%), Query Frame = 2
Query:    2 QALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRG---NPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSP---SDFGL-FQAGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSP 556
            QA+ DG  R  L + LPLIG T++DDWPGG +Q++KA GP+V S+L G   +   K        I+D+SDAVG  +       DDA++++FPT ++L   Q +AA    R + LVN  W+S    SDFG   Q    EE ++ F+V Y L+ + + G  LRLL  YPG W++F++ + +G  E +    Q P
Sbjct:  172 QAIKDGIKRMQLEVLLPLIGATDLDDWPGGIQQQFKAAGPVVTSLLSGLVDSDNYKAEGGYRSYIIDDSDAVGAWE------NDDAALVLFPTAESLDSVQALAAAKEDRPLLLVNVQWQSGQVISDFGFGAQKRSREEFVNSFEVVYFLKQMRMLGEDLRLLKRYPGDWQVFVM-DAAGGSECVAVEPQRP 356          
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: D8UJ99_VOLCA (DUF1995 domain-containing protein n=3 Tax=Volvox TaxID=3066 RepID=D8UJ99_VOLCA)

HSP 1 Score: 119 bits (297), Expect = 6.420e-27
Identity = 83/228 (36.40%), Postives = 122/228 (53.51%), Query Frame = 2
Query:    5 ALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKE-GASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGS-RLVALVNPAWRSP----SDFGLFQA-GEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDK-KGKPNAS--ERVQASAKFFQDSI 658
            A  DG   Q L L LPLIG T++DDWPGG RQ++KA  PMVESVLR     K     +   I D+ DAVG           + + ++FPT  TL    Q+  G  +  LV +VNP W +     SDFG  Q   EAE  ++ F  TY L+ L VYG ++R L  +P  W++ ++  G G  + + + D+ P +  ++E+ + D+ +   N S  +R++    F QDS+
Sbjct:   30 AWRDGVRLQRLELLLPLIGATDLDDWPGGIRQQFKAAQPMVESVLRTVKQIKGLQGPLAANIWDQGDAVGAW------TGKNLACVLFPTAGTLDKLTQLCNGPDAPELVLIVNPQWETRGNLVSDFGFGQRKAEAERFINSFQPTYCLKQLRVYGDSIRTLKAHPNRWQVHVVDRG-GSSDCIATRDEQP-SYQEIEALLRDRPESMMNKSIFDRIKIEFAFNQDSL 249          
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A835WHR4_9CHLO (DUF1995 domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WHR4_9CHLO)

HSP 1 Score: 119 bits (298), Expect = 9.830e-27
Identity = 82/229 (35.81%), Postives = 122/229 (53.28%), Query Frame = 2
Query:    5 ALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGAS--IVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGS-RLVALVNPAWRSP----SDFGLFQAGEAEET-LSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDKKG---KPNASERVQASAKFFQDSI 658
            A  DG  RQ L LSLPLIG T++DDWPGG RQ++KA  PMVES+LR      EG    +   I D+ DAVG           + + ++FPT  TL    ++  G  +  LV +VNP W +     SDFG     EA E  ++ F  TYSL+   VYG  LR L  YP  W++ L+ +G    E + +  ++ P+  ++E+ + D+       +  +R+Q   +F ++S+
Sbjct:   63 AWRDGIKRQRLELSLPLIGATDLDDWPGGIRQQFKAAQPMVESILR-TVKQVEGLQGPLAANIWDQGDAVGAW------TGKNLACVLFPTASTLDRLNKLCTGPDAPELVLIVNPQWETRGNLVSDFGFGARKEASERFIASFADTYSLRQWRVYGDQLRTLRAYPNRWQVHLV-QGRNASECIAT-REAAPSYQEIEALLRDRPDAMMNKSIFDRIQTEFRFNEESL 282          
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A4RU68_OSTLU (DUF1995 domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RU68_OSTLU)

HSP 1 Score: 117 bits (292), Expect = 4.390e-26
Identity = 79/229 (34.50%), Postives = 117/229 (51.09%), Query Frame = 2
Query:    5 ALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSPS----DFGLFQ-AGEAEETLSEFDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKR---ELLGSWDQSPPTNDQVESAVFDKKGK---PNASERVQASAKFFQDSI 658
            AL DGKT Q + L+LPLIG T++DDWPGG RQ+Y A  PMV  VLR   A  EG +  ++++D++DAV  + L          V+ FPT + L   + +      RL  + NP W +      DFG       AEE + +F+ TY L+   + G  +R L  YP  W++F +      +   E LG +D+ P   DQ++  +  ++G     N  ER +  A F   S+
Sbjct:   40 ALRDGKTTQAIELNLPLIGATDLDDWPGGIRQQYGALAPMVSEVLRLINAGAEG-TCQQRVIDDADAVAALTL------GSDVVVSFPTAEVLDDLRAIENKNDFRLKIIANPQWNTKGAIIGDFGFGPWKRRAEEFVGKFEQTYYLKEQRIQGEIVRTLKVYPNKWQVFALAPNENNKIVAEALGEFDERP-LYDQLKKLLESREGSIAAMNWVERAKREATFNAKSL 260          
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Match: A0A0D6QZW1_ARACU (DUF1995 domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QZW1_ARACU)

HSP 1 Score: 117 bits (292), Expect = 6.790e-26
Identity = 77/228 (33.77%), Postives = 126/228 (55.26%), Query Frame = 2
Query:    5 ALSDGKTRQILRLSLPLIGKTEIDDWPGGDRQRYKACGPMVESVLRG---NPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPTTDTLSLQQQVAAGAGSRLVALVNPAWRSP---SDFGLFQAGEAEETLSE-FDVTYSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQVESAVFDKKGKPNASE---RVQASAKFFQDSI 658
            A+ DG TR  L   LPLIG T++DDWPGG +Q++KA  P+V S+L G   + AA    S     LDE DA G+ +      KD+ ++++FPT ++L   + +     +R + L+NP W++    SDFG  +  +  E L E F   Y L+ + + G  +RLL  YPG W++F+I +G G  + + + ++  P+  +++  + ++KG         R+    KF QDS+
Sbjct:   68 AIEDGSTRLQLEFLLPLIGATDLDDWPGGIQQQFKAAVPVVSSLLNGIIEDEAAAADNSYKIYFLDEGDATGVWE------KDEIALVLFPTAESLPAIENLEK-IKNRPLLLLNPQWQAGQVISDFGFGEQRKQREKLVESFSTVYFLKQVRILGEDVRLLKTYPGDWQVFVIDKG-GSIDCIAT-EEEKPSYKRLQDILKERKGSVANKGWFGRLMNELKFNQDSL 286          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18125.5585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWR4_9PHAE9.660e-14798.17DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6V1R6U0_HETAK3.830e-4638.20Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1D696_CYCTE3.070e-3131.45Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Y1I3J2_KLENI2.270e-3034.39DUF1995 domain-containing protein n=1 Tax=Klebsorm... [more]
A0A6T7UM00_9CHLO1.980e-2837.33Hypothetical protein n=2 Tax=Pyramimonas obovata T... [more]
A0A176WGM7_MARPO8.760e-2839.58DUF1995 domain-containing protein n=2 Tax=Marchant... [more]
D8UJ99_VOLCA6.420e-2736.40DUF1995 domain-containing protein n=3 Tax=Volvox T... [more]
A0A835WHR4_9CHLO9.830e-2735.81DUF1995 domain-containing protein n=2 Tax=Chlamydo... [more]
A4RU68_OSTLU4.390e-2634.50DUF1995 domain-containing protein n=1 Tax=Ostreoco... [more]
A0A0D6QZW1_ARACU6.790e-2633.77DUF1995 domain-containing protein n=1 Tax=Araucari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18125contigEcto-sp13_S_contig18125:115..3500 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score351.3
Seed ortholog evalue2.7e-94
Seed eggNOG ortholog2880.D8LK72
Model size1480
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.Domain of unknown function (DUF1995)
EggNOG OGs2CY3V@1,2S1TJ@2759
Ec32 ortholog descriptionDomain of unknown function DUF1995
Ec32 orthologEc-08_002980.1
Cds size540
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18125.5585.1prot_Ecto-sp13_S_contig18125.5585.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18125 934..3379 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462935.765225-UTR-Ecto-sp13_S_contig18125:114..9331681462935.765225-UTR-Ecto-sp13_S_contig18125:114..933Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18125 115..933 -
1681462935.8228865-UTR-Ecto-sp13_S_contig18125:3379..35001681462935.8228865-UTR-Ecto-sp13_S_contig18125:3379..3500Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18125 3380..3500 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462935.7773197-CDS-Ecto-sp13_S_contig18125:933..11371681462935.7773197-CDS-Ecto-sp13_S_contig18125:933..1137Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18125 934..1137 -
1681462935.7875116-CDS-Ecto-sp13_S_contig18125:1568..17271681462935.7875116-CDS-Ecto-sp13_S_contig18125:1568..1727Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18125 1569..1727 -
1681462935.7978883-CDS-Ecto-sp13_S_contig18125:2237..23751681462935.7978883-CDS-Ecto-sp13_S_contig18125:2237..2375Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18125 2238..2375 -
1681462935.8115485-CDS-Ecto-sp13_S_contig18125:3340..33791681462935.8115485-CDS-Ecto-sp13_S_contig18125:3340..3379Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18125 3341..3379 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18125.5585.1

>prot_Ecto-sp13_S_contig18125.5585.1 ID=prot_Ecto-sp13_S_contig18125.5585.1|Name=mRNA_Ecto-sp13_S_contig18125.5585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp
MVESVLRGNPAAKEGASIVEQILDESDAVGLMQLQCKEAKDDASVMIFPT
TDTLSLQQQVAAGAGSRLVALVNPAWRSPSDFGLFQAGEAEETLSEFDVT
YSLQSLVVYGYTLRLLYCYPGPWRLFLIGEGSGKRELLGSWDQSPPTNDQ
VESAVFDKKGKPNASERVQASAKFFQDSI*
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mRNA from alignment at Ecto-sp13_S_contig18125:115..3500-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18125.5585.1 ID=mRNA_Ecto-sp13_S_contig18125.5585.1|Name=mRNA_Ecto-sp13_S_contig18125.5585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3386bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18125:115..3500- (Ectocarpus species13 EcNAP12_S_4_19m)
GCAGGCTCTCTCTGACGGCAAGACTCGCCAGATTTTGAGGCTGTCCCTCC CTTTGATCGGGAAAACCGAGATCGACGACTGGCCGGGTGGGGATCGACAA CGCTACAAGGCCTGTGGGCCAATGGTGGAAAGCGTGCTGCGTGGAAATCC AGCGGCAAAGGTACTGATGCAGGGGTACGTTGTTACATCTCACCATTGTC CTCGCGCAGCATCCGTACACGATGTGTTGTAATACCTCCGCGTACACTCC CAAAAATTTTCAACCATGCAGATTGGTGCCACAGCAACAGCAACGTGCTC GCTGCGTGCAGTGCTTTGAATCTGCTTGCACGGAGCGAGACAACGCATAG CAGGGGAGGTATTTGGGCACCGTTGTTTTGCAAGAAGGCCCTCATGTAGG GGCTTTAACGCAGCTCTGCTTTTTTGTGTGGTTTGGGGCGAGGGCAAGGC GGTCGATGGAGGGTTGCGAACTCTAGGCTAGGCGTCCTAACGATGAGCAA TGGCGATGAAAAGTTGGGGCATGTGTAGAGTAACGTGGACAGCACAGACG TGGGTTTGATGAGGAGGCCAGAGAGAGGGGAAGAGGGGGTGGAAAGGGAA CGAGCCGAGAGAGAAGGGCGACGAGGGTGGCGGGCAAGCGACCGTCAAGC GATTGAGCCACTCCTAAAATCGGACAGATCAAGCCCGCGATTTGTCTACC CGGAGGGATTTGTCCCGCCGGCGTTGGGCGTTGCAGATGGACAAGAGTAG GCATGTTTGATTCAAGGGACCCCCACCTTACACAGATGACCGCGCATTCG ATAGCTGGATCCACCTCGCCAGGAAACACGGTCGCCTCAATTTGACAGTC TGCGAGCGTGAGTAACGAAAAGGGCGTTTTGTTCAACCTGCAAGGACAGA GAATCTACGCTACTCAGGCCAGTTGCGACGTCCAGCACCCCGCTACCACC GCCTGTTCGAAACGGATTGTCAACTATTGCAAGGTTGCGGGACTTTCTCT CCATGAAAGTAGACGTCCTGAACCAATCTTGCTCCATCTTGGGACGGATG CATGGCGAAAACGCTGAAGAAAGGCGAGTAACGAATGACATGAGGACACC ACGATCCCCACCCCCCTCCTCACAGGAAGGCGCGTCGATTGTGGAGCAGA TTCTTGACGAGTCTGACGCGGTGGGGCTCATGCAGCTGCAGTGCAAGGAG GCCAAAGACGACGCTTCCGTCATGATTTTCCCGACAACGGACACTCTCTC CTTGCAGCAACAGGTGAAGATTAAGATTTGCAAGCATTGCGTCCGCTCTG CCTGTGCTTTATTACCATACGTTTATATTGTAGTACAACCTAAAGCTCCA GGCGCTGTTGAGGTTGGCGGCAGCCAGTGAAGTGATGCTGTGCTATCACT GCCGCATACAAATGCGAATTACAGCTTTGACGTTGTAGGTTCAATTAAGG GGGTAGCACAACGTCCGGCAGCCGGCAGCTGGCACTGCTTGTCGATCTCA CCGCGTTTTCACCTCGCTTCGGTCCCACTCCGTTACACCTACCTGCGGGG TAGATACGCTACCCCACAGCCTTTTTTCTTTGTCACAAGCAGCGCTTGTG CACATAATCCCCTTCCGTTTTGCTCGCCAATATGTAGGCCAATTGACTCA AGATCGACCGCAGTGGTACTATAGTATTGTGCCCCGCTTGTTCGGTGTAT CCGAATCTTTAACCGCCATCCCGCACCCCCGTGACCAAAACCCGCGGGTA CAAAATCGCAAACGGGGGATTAGGTAGCGGCGGGCGCCGGCTCCCGGCTC GTGGCGCTCGTCAATCCTGCATGGAGGTCCCCATCAGACTTCGGGCTGTT CCAGGCCGGAGAAGCAGAGGAAACGCTGTCCGAATTTGATGTCACCTACT CGCTCCAGAGCCTTGTAGTCTACGGTTACACGGTGAGAACACCGATCGTC CTGAATCTGATCACCGTGCTACCTTTGTTATTATTGCCCCTCGATGCTGG TTGTTTCCTCTTTCTTTCGATGTTTACCTACGGGAAATTGGGCGTTATAG TTCCCCGATATTTGGTTCTTTGCCTTTCGATTCTTTCTCGTGCTCGTGTG GCGGAAGCCAACCCATCGATGTGGTCATTGTCTGACAAAGTTTGTGTTGT AGAGTTCAGCGCTGCCTTCTGCCTCCACAGAAGCTTGTGGTCATTCTCAC ACACACCATCGCCCTGAGGGTTGCACCACAACAGATATGACTAGGAGTAC GCAAGTATTACCTCTCACACACCCCGCCGTCGCTCCCTCACGGGGATGTT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTATCTATCT ATCTCTCTAACAGCTACGGCTGCTGTACTGCTACCCTGGCCCGTGGAGGC TCTTCCTCATCGGTGAAGGCAGCGGAAAGCGCGAGCTCCTGGGTTCTTGG GACCAAAGCCCGCCAACAAACGACCAAGTGGAGAGCGCGGTGTTCGACAA GAAGGGAAAGCCGAACGCGTCGGAGAGGGTTCAGGCTAGCGCAAAGTTTT TCCAGGATAGCATATGATGCTTGCGCTACAAAGTGCGTCACGATATACCC CGACGGTTGAAAACACAGTGGTTGTCGAGGTTTCTACAGTGCCGCAGCCC GCTCGAAAATAGCGCAGCAGCAAAGATAGATAATTTATTGGAGTCTTCCT ATACTGACAGCGTTGTGATTCTCCAAGTAGAGTCCGCCAGTAGAGTATCG CAGCACGCCACATGTTATCCTTGGCTGTTGTGGCATCGCGCTTTTCGTTT CTTTTTTGGCCATAGCGCAGGCATCGTAGAGAAAGATTAAGCCAAAGATG ATGCGGGGACGACGAGAAGCAATAGAGGAGACTACACCCCACACCACCAA CTACTATCGCTGTTTGACGGTATACAGATGCTTGTCGGCAGGGAGGTACA AACTCAGGGCGACAGCTTTGAACGGGGAGGGTGTTGGTCGGTGGACGACG AGTGTTTCCATGGCCGATAAGATTAGCAAGCGTGCGCGTCTGCGTCGAGA GGTGGCGCATCGCCCGACTCGAACATGTTGAGCACACCGGACGCGAGGGA CACCGACGCAAACACTTTCAAACACACACAAGTAAACAAATGTCCTTGCG GGAACCCATGGAAAAGAATAGGCGCCGCACTCTTGGCGGTGGTCTCATCA TGTTGGAAATTAGAGGCTTCGGGTCTGCTGTAGTCAAAAACATTTCACTG GTGGGATCGCTTGTGCTAGATCGCTTGGTGTATTCCTTTCAGCGAACGTC AGTCTGCTGAAAAGCGATCCTCACTAAAACAAAGATAGTAGTCTATCTGT TCAAAAGTGACCTGTGCTACGGCGGTAAGTAACAGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18125:115..3500-

>mRNA_Ecto-sp13_S_contig18125.5585.1 ID=mRNA_Ecto-sp13_S_contig18125.5585.1|Name=mRNA_Ecto-sp13_S_contig18125.5585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=540bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18125:115..3500- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGGAAAGCGTGCTGCGTGGAAATCCAGCGGCAAAGGAAGGCGCGTC
GATTGTGGAGCAGATTCTTGACGAGTCTGACGCGGTGGGGCTCATGCAGC
TGCAGTGCAAGGAGGCCAAAGACGACGCTTCCGTCATGATTTTCCCGACA
ACGGACACTCTCTCCTTGCAGCAACAGGTAGCGGCGGGCGCCGGCTCCCG
GCTCGTGGCGCTCGTCAATCCTGCATGGAGGTCCCCATCAGACTTCGGGC
TGTTCCAGGCCGGAGAAGCAGAGGAAACGCTGTCCGAATTTGATGTCACC
TACTCGCTCCAGAGCCTTGTAGTCTACGGTTACACGCTACGGCTGCTGTA
CTGCTACCCTGGCCCGTGGAGGCTCTTCCTCATCGGTGAAGGCAGCGGAA
AGCGCGAGCTCCTGGGTTCTTGGGACCAAAGCCCGCCAACAAACGACCAA
GTGGAGAGCGCGGTGTTCGACAAGAAGGGAAAGCCGAACGCGTCGGAGAG
GGTTCAGGCTAGCGCAAAGTTTTTCCAGGATAGCATATGA
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