mRNA_Ecto-sp13_S_contig1810.5572.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1810.5572.1 vs. uniprot
Match: D7G5S3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S3_ECTSI) HSP 1 Score: 207 bits (527), Expect = 6.330e-62 Identity = 98/113 (86.73%), Postives = 99/113 (87.61%), Query Frame = 2
Query: 716 MGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLCANGTASDQCAVPPAGFPHGSPDLWCQAKYDSDECTAIKAE 1054
MGCFQ VSLHMMVFYFWLV+LVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLC NGTASDQCAVPPAGFPHGSPDLWCQAKYDSDECTAIKAE
Sbjct: 1 MGCFQ-------------VSLHMMVFYFWLVSLVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLCLNGTASDQCAVPPAGFPHGSPDLWCQAKYDSDECTAIKAE 100
BLAST of mRNA_Ecto-sp13_S_contig1810.5572.1 vs. uniprot
Match: D7G5S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S4_ECTSI) HSP 1 Score: 206 bits (525), Expect = 1.360e-60 Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 2
Query: 1193 MQSMINYLLVFPVVGAIVMGYVQSLHRPMLEVLGLVDLHYVVGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLVLITLGLVSWARLANGFDPDDPEGLVRIACEV 1528
MQSMINYLLVFPVVGAIVMGYVQSLHRPMLEVLGLVDLHYVVGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLVLITLGLVSWARLA+GFDPDDPEGLVRIACEV
Sbjct: 1 MQSMINYLLVFPVVGAIVMGYVQSLHRPMLEVLGLVDLHYVVGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLVLITLGLVSWARLADGFDPDDPEGLVRIACEV 112
BLAST of mRNA_Ecto-sp13_S_contig1810.5572.1 vs. uniprot
Match: A0A7S2R9T0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9T0_9STRA) HSP 1 Score: 120 bits (300), Expect = 6.850e-26 Identity = 72/240 (30.00%), Postives = 123/240 (51.25%), Query Frame = 2
Query: 560 RNWLIALNSFSMASGVVLAASAVSLL--LFTRYEEEEADGTDSTVYSTAVALAIMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLCANGTASD-QCAVPPAGFPHG------SPDLWCQAKYDSDECTAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLAALVLTVRVVTIPIIMRSMQSMINYLLVFPVVGAIVMG 1252
R WLI N + + +A + ++ ++ E D D+ +Y +A+A++GC + AV+GI A KVSL M+V YFWL L++ ++S+ +F FR W+ WD P +++VR C + SD +CAV P P + D WC+ +++ +C I EA D+ F + S ++ + +L L R+VT+ II +SM +INY ++ P + +++G
Sbjct: 13 RQWLILTNCLILICSLFIAGVSAYVINEIYKETFERSTDQEDTMLYFW-IAMAVLGCLHGLCAVVGITGALKVSLDMIVTYFWLAVLLLAPTLLFSVLMFEFQKLFRSWIKHRWDTPEMSSVRRSFCKPRSVSDTKCAVYPPSLPFKYNITDYTVDEWCEDFWNATDCRLIYIEATDQVTVFAEQALTATATASAVEILLLFFSLYLAYRIVTMSIITKSMNELINYFMILPAIAILLVG 251
BLAST of mRNA_Ecto-sp13_S_contig1810.5572.1 vs. uniprot
Match: A0A8K1C801_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C801_PYTOL) HSP 1 Score: 77.4 bits (189), Expect = 1.200e-11 Identity = 69/282 (24.47%), Postives = 131/282 (46.45%), Query Frame = 2
Query: 692 STAVALAIMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLCANGTASDQCAVPPAGFPHGSPDLWCQAKYDSDECTAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLAALVLTVRVVTIPIIMRSMQSMINYLLVFPVVGAIVMGY---VQSLHRPMLEVLGLVDLHYVVGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLVLITLGLVSWARLANGFDPDDPEGLVRIACEV 1528
++A ALA +G F + +V+G V A + M++ YF+L +I +F+ S +A+ F + WL HW P L +R + C E D+A+ +L + G L ++ +LAA+ +R+VT+PI+M+++ ++IN+ +F V+G + GY V+S + + VVG L+ ++V+G++A + +L +Y+ G+GA + LV +LA+ ++ + +AC++
Sbjct: 37 ASAAALASIGAFVVLFSVLGFVGAGREKSAMLMLYFFLNFFLITCLFISSYSAIAFQDSLESWLKIHWKHPVLDYLRTKPCC--------------------------------------ENYDEAVSYLESKFLILGALGFVCLLLVLAAMYCVIRIVTVPIVMKNLLTVINF--IFIVLGTGIFGYGCAVKSKDELTSGQEWIAIMFIVVGTLIFALSVIGIIASRSKSRTMLLIYIVGIGACFVALLVCAGAAFSFSDKLADNYNASQHRDV--MACDI 276
BLAST of mRNA_Ecto-sp13_S_contig1810.5572.1 vs. uniprot
Match: A0A3F2RM06_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RM06_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 4.150e-11 Identity = 76/294 (25.85%), Postives = 131/294 (44.56%), Query Frame = 2
Query: 557 ERNWLIALNSFSMASGVVLAASAVSLLLFTRYEEEEADGTDSTVYSTAVALAIMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLCANGTASDQCAVPPAGFPHGSPDLWCQAKYDSDECTAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLAALVLTVRVVTIPIIMRSMQSMINYLLVFPVVGAIVMGYVQSLHRPMLEVLGLVDLHY-VVGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLV 1435
R L L S A GV L + + L S V ++A AL+ +G ++A++G V A + +++ +F+L L++ +F+ AA F W+ HW LA +R++ C CA DK +D+L + V G + V ++ ++AA+ VR+VT+PI+MRSM S+ N + V G + G +H M + + + VVG L++ ++V+G++ + LL +Y+ GLG+ L+ LV
Sbjct: 4 SRKVLRLLCLLSFAGGVSLLGLGLQISL------------SSHVGASAAALSGLGGCVVLLALLGFVGAGRDKSRLLLLFFFLNFLLLTGLFVACYAAFFFRDALESWVKHHWSSDVLAALREKEC--------CAT------------------------------YDKTVDYLEHQLVVVGAVGVVCMLLVVAAMYCVVRIVTVPIVMRSMLSVTNAVFVLLGTGLFIFGLSVKVHDEMTSGQRWIAIIFIVVGTLMVALSVLGIVGSRAKSRSLLLIYVIGLGSCLIALLV 247
BLAST of mRNA_Ecto-sp13_S_contig1810.5572.1 vs. uniprot
Match: H3GVR1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GVR1_PHYRM) HSP 1 Score: 74.3 bits (181), Expect = 1.260e-10 Identity = 73/294 (24.83%), Postives = 130/294 (44.22%), Query Frame = 2
Query: 557 ERNWLIALNSFSMASGVVLAASAVSLLLFTRYEEEEADGTDSTVYSTAVALAIMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLCANGTASDQCAVPPAGFPHGSPDLWCQAKYDSDECTAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLAALVLTVRVVTIPIIMRSMQSMINYLLVFPVVGAIVMGYVQSLHRPMLEVLGLVDLHY-VVGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLV 1435
R +L L S GV L A+ L+L T + ++A ALA +G +++ +G V A + +++ +F++ +++ +F+ AA F W+ HW LA +RD C T SD A+ +L + V G + V+ ++ +LA++ VR+VT+PI+MRSM S++N + G + G +H M + + + VVG L++ ++V+G++ + LL +Y+ GLG L+ LV
Sbjct: 4 SRKFLRLLTLLSFGCGVSLLGLALHLVLSTNFS------------ASAAALAALGGCVVLLSALGFVGAGRDKSRLLLLFFFVNFVLVTGLFVACYAAFFFQDALESWVKHHWTAHVLAALRDTSCC-ATYSD-------------------------------------AVQYLEHRVAVVGAVGVACMLLVLASMYCVVRIVTVPIVMRSMLSVMNAIFTLLGTGLFIFGLSVKVHDEMTSGQRWIAIIFIVVGTLMVALSVLGIIGSRSKSRSLLLIYIVGLGGCLVALLV 247
BLAST of mRNA_Ecto-sp13_S_contig1810.5572.1 vs. uniprot
Match: A0A2P4WWC0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWC0_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 2.980e-10 Identity = 73/294 (24.83%), Postives = 132/294 (44.90%), Query Frame = 2
Query: 557 ERNWLIALNSFSMASGVVLAASAVSLLLFTRYEEEEADGTDSTVYSTAVALAIMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLCANGTASDQCAVPPAGFPHGSPDLWCQAKYDSDECTAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLAALVLTVRVVTIPIIMRSMQSMINYLLVFPVVGAIVMGYVQSLHRPMLEVLGLVDLHY-VVGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLV 1435
R +L L S + GV L AV ++ T + ++A ALA +G +++V+G V A + +++ +F+ +++ +F+ AA F W+ HW P LA +RD C T SD A+++L + V G + V+ ++ ++A++ VR+VT+PI+MRSM S++N + G + G +H M + + + VVG L++ ++V+G++ + LL +Y+ GLG L+ LV
Sbjct: 4 SRKFLRLLTLLSFSCGVSLLGLAVHIVATTDFG------------ASAAALAALGGCVVLLSVLGFVGAGRDKSRLLLLFFFADFVLVTGLFVACYAAFFFQDALESWVKHHWTAPVLAALRDTSCCV-TYSD-------------------------------------AVEYLEHRVVVIGAVGVACMLLVIASMYCVVRIVTVPIVMRSMLSVMNAVFTLLGTGLFIFGLSVKVHDEMTSGQRWIAIIFIVVGTLMVALSVLGIIGSRSKSRSLLLIYIIGLGGCLIALLV 247
BLAST of mRNA_Ecto-sp13_S_contig1810.5572.1 vs. uniprot
Match: K3XBP0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBP0_GLOUD) HSP 1 Score: 72.4 bits (176), Expect = 5.300e-10 Identity = 76/327 (23.24%), Postives = 141/327 (43.12%), Query Frame = 2
Query: 557 ERNWLIALNSFSMASGVVLAASAVSLLLFTRYEEEEADGTDSTVYSTAVALAIMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLCANGTASDQCAVPPAGFPHGSPDLWCQAKYDSDECTAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLAALVLTVRVVTIPIIMRSMQSMINYLLVFPVVGAIVMGY---VQSLHRPMLEVLGLVDLHYVVGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLVLITLGLVSWARLANGFDPDDPEGLVRIACEV 1528
R +L L + + ASG L A + + L + ++++AVALA +G +++ +G V A + M++ +F+L ++ +F+ S AA F WL HW D L +R + C C+ + F++L G + + + +LA+L +R+VT+PI+M++M ++IN+ +F +GA V Y V+S + + VG ++ ++V+GV+ + LL +Y+ G+GA L+ L G LA ++ E +AC++
Sbjct: 4 SRRFLRFLCALTFASGAALLALGLHVAL------------SAHLHASAVALASLGGIVVLLSTLGFVGAGREKSGMLMLFFFLNFFLVTCLFVASYAAFCFQDAMESWLKHHWSDEVLDYLRSKPC---------------------------------CSTYEDTVTYLEHKFMTL-----GAIGFACIALVLASLYCVIRIVTVPIVMKNMLTVINF--IFIALGAGVFAYGLTVKSRDEMTAGQEWIAIVFITVGTFIVALSVLGVIGARAKSRTLLLIYILGIGACLLALLTCAVGGFTFSGELAKTYEKHASENS-SLACDI 277
BLAST of mRNA_Ecto-sp13_S_contig1810.5572.1 vs. uniprot
Match: D0NLX1_PHYIT (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=D0NLX1_PHYIT) HSP 1 Score: 71.6 bits (174), Expect = 8.500e-10 Identity = 69/293 (23.55%), Postives = 129/293 (44.03%), Query Frame = 2
Query: 560 RNWLIALNSFSMASGVVLAASAVSLLLFTRYEEEEADGTDSTVYSTAVALAIMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLCANGTASDQCAVPPAGFPHGSPDLWCQAKYDSDECTAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLAALVLTVRVVTIPIIMRSMQSMINYLLVFPVVGAIVMGYVQSLHRPMLEVLGLVDLHY-VVGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLV 1435
R L L S GV L A+ +++ T + ++A AL+ +G V++++G + A + +++ +F++ L++ +F+ A F W+ HW LA +RD WC A Y A+D+L + G + V+ ++ ++A++ VR+VT+PI+MRSM S++N G + G +H M + + + VVG L++ ++V+G++ + LL +Y+ GLG+ L+ LV
Sbjct: 4 RKCLRLLTLLSFGCGVTLLGFALHVVITTDFG------------ASAAALSALGIGVVVLSLLGFIGAGRDKSRLLLIFFFVNFLLVTGLFVACYTAFFFQDALESWVKHHWTANVLAALRDS-------------------------WCCATYSD-------------AVDYLEHRVVAIGAIGVACMLLVIASMFCVVRIVTVPIVMRSMLSVMNVAFTLLGTGLFIFGLSVKVHDEMTSGQRWIAIIFIVVGTLMIALSVLGIIGSRSKSRSLLLIYIIGLGSCLVALLV 246
BLAST of mRNA_Ecto-sp13_S_contig1810.5572.1 vs. uniprot
Match: A0A2D4BE20_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE20_PYTIN) HSP 1 Score: 69.7 bits (169), Expect = 3.790e-9 Identity = 74/327 (22.63%), Postives = 142/327 (43.43%), Query Frame = 2
Query: 557 ERNWLIALNSFSMASGVVLAASAVSLLLFTRYEEEEADGTDSTVYSTAVALAIMGCFQTVVAVIGIVAADKVSLHMMVFYFWLVALVIGSMFMWSIAALDFHFNFRVWLDKHWDDPALANVRDRLCANGTASDQCAVPPAGFPHGSPDLWCQAKYDSDECTAIKAEAVDKAMDFLSLFMNVAGGLSVSSVVEMLAALVLTVRVVTIPIIMRSMQSMINYLLVFPVVGAIVMGY---VQSLHRPMLEVLGLVDLHYVVGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLVLITLGLVSWARLANGFDPDDPEGLVRIACEV 1528
R L A+ + ++A G L A V + L + ++A ALA +G F + +++G V A + +++ YF+L + +F+ S AAL F + WL +HW P L +R + C + + + +L + G + + + +LAA+ VR+VT+PI+M+++ +++N ++F V+GA + Y V+S + L V+G + ++V+G++ + +L +Y+ G+G L+ +V RLA +D + RIAC++
Sbjct: 4 SRKVLRAICALTLAGGAALLAIGVHVSLTAHLQ------------ASAAALASIGAFVVLFSLLGFVGAGRDKSQLLMLYFFLNFFLATCLFLSSYAALSFQHSLESWLKRHWGHPVLDYLRAQPCCH--------------------------------------TYETTVAYLENQFVLLGAVGFACLALVLAAMYCVVRIVTVPIVMKNLLTVLN--VIFIVLGAGLFTYGGVVKSKDELTSGQDWIAVLFIVIGTFIFALSVIGIIGSRSKSRTMLLIYIVGIGGCLVALIVCAGAAFSFSDRLAAQYDANLHTS--RIACDI 276 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1810.5572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1810.5572.1 >prot_Ecto-sp13_S_contig1810.5572.1 ID=prot_Ecto-sp13_S_contig1810.5572.1|Name=mRNA_Ecto-sp13_S_contig1810.5572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=345bp MVLFPRTFDAVRWRYWCSNERNWLIALNSFSMASGVVLAASAVSLLLFTRback to top mRNA from alignment at Ecto-sp13_S_contig1810:15..8286- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1810.5572.1 ID=mRNA_Ecto-sp13_S_contig1810.5572.1|Name=mRNA_Ecto-sp13_S_contig1810.5572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8272bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1810:15..8286- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1810:15..8286- >mRNA_Ecto-sp13_S_contig1810.5572.1 ID=mRNA_Ecto-sp13_S_contig1810.5572.1|Name=mRNA_Ecto-sp13_S_contig1810.5572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1035bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1810:15..8286- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |