mRNA_Ecto-sp13_S_contig18012.5524.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18012.5524.1 vs. uniprot
Match: D7FTQ1_ECTSI (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTQ1_ECTSI) HSP 1 Score: 142 bits (357), Expect = 1.110e-37 Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 1
Query: 1 QPEVMHIHPEPRAEANNKVLTAFIEGGEPTETPMRVAGLTGAGQVIGVTDTGLDDNSCFFKDEEGSVPR 207
QPEVMHIHPEPRAEANNKVLTA+IEGGEPTETPMRVAGLTGAGQVIGVTDTGLDD+SCFFKDEEGSVPR
Sbjct: 450 QPEVMHIHPEPRAEANNKVLTAYIEGGEPTETPMRVAGLTGAGQVIGVTDTGLDDSSCFFKDEEGSVPR 518
BLAST of mRNA_Ecto-sp13_S_contig18012.5524.1 vs. uniprot
Match: D8LU20_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU20_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 3.470e-11 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 1 QPEVMHIHPEPRAEANNKVLTAFIEGGEPTETPMRVAGLTGAGQVIGVTDTGLDDNSCFFKDEEG 195
+PEV+ + P A N V A ++ TETP+ AGL G G+VI V DTGLD+ SCFF D++G
Sbjct: 259 KPEVLRVSPLQSASLYNAVANALVQSATTTETPLLDAGLDGTGEVIQVVDTGLDETSCFFADDDG 323
BLAST of mRNA_Ecto-sp13_S_contig18012.5524.1 vs. uniprot
Match: D8LSW0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW0_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 4.750e-11 Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 1 QPEVMHIHPEPRAEANNKVLTAFIEGGEPTETPMRVAGLTGAGQVIGVTDTGLDDNSCFFKDEEG 195
+PEV+ + P A +N V A ++ TETP+ AGL G G+VI V D+GLD+ SCFF D++G
Sbjct: 306 KPEVLRVSPLQSARLHNAVANALVQSATTTETPLLDAGLDGTGEVIQVVDSGLDETSCFFADDDG 370
BLAST of mRNA_Ecto-sp13_S_contig18012.5524.1 vs. uniprot
Match: A0A836CH33_9STRA (Subtilisin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH33_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.490e-9 Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 1 QPEVMHIHPEPRAEANNKVLTAFIEGGEPTETPMRV----------------AGLTGAGQVIGVTDTGLDDNSCFFKDEE-GSVPR 207
+PEV+H+ P R +N + TA ++ G AGLTG GQV+G++DTGLDD SCFF+D+E G+ PR
Sbjct: 435 RPEVLHVVPLHRPRLHNDLATAVLQSGSXXXXXXXXXXXXXXXXXXAKALWEAGLTGEGQVLGISDTGLDDASCFFRDDERGATPR 520
BLAST of mRNA_Ecto-sp13_S_contig18012.5524.1 vs. uniprot
Match: A0A7S4PA92_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PA92_GUITH) HSP 1 Score: 59.7 bits (143), Expect = 9.670e-9 Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 1 QPEVMHIHPEPRAEANNKVLTAFIEGGEPTETPMRVAGLTGAGQVIGVTDTGLDDNSCFFKDEEGSVP 204
QP I P+ +A+ NK I+ G+ ++ P+ G+TG GQ++G+ DTG+D N CFF D + P
Sbjct: 255 QPGTHWIEPKQQAKLRNKWAKGIIQSGDASQMPIFSKGITGTGQILGIADTGIDMNLCFFYDADHPAP 322
BLAST of mRNA_Ecto-sp13_S_contig18012.5524.1 vs. uniprot
Match: L1JFD5_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JFD5_GUITC) HSP 1 Score: 59.7 bits (143), Expect = 9.720e-9 Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 1 QPEVMHIHPEPRAEANNKVLTAFIEGGEPTETPMRVAGLTGAGQVIGVTDTGLDDNSCFFKDEEGSVP 204
QP I P+ +A+ NK I+ G+ ++ P+ G+TG GQ++G+ DTG+D N CFF D + P
Sbjct: 262 QPGTHWIEPKQQAKLRNKWAKGIIQSGDASQMPIFSKGITGTGQILGIADTGIDMNLCFFYDADHPAP 329
BLAST of mRNA_Ecto-sp13_S_contig18012.5524.1 vs. uniprot
Match: A0A7S4SZ44_9STRA (Subtilisin n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SZ44_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 2.420e-8 Identity = 28/72 (38.89%), Postives = 41/72 (56.94%), Query Frame = 1
Query: 1 QPEVMHIHPEPRAEANNKVLTAFIEGG----EPTETPMRVAGLTGAGQVIGVTDTGLDDNSCFFKDEEGSVP 204
QPE+ H+ + + N + +GG + ETP+ AG+TGAGQV+ V+DTGLD +C+F D P
Sbjct: 316 QPEICHVEVQGVVDTGNDIAQWLAQGGVGSEDAMETPLYDAGITGAGQVVAVSDTGLDYENCYFMDANAPDP 387
BLAST of mRNA_Ecto-sp13_S_contig18012.5524.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA) HSP 1 Score: 58.5 bits (140), Expect = 2.450e-8 Identity = 31/68 (45.59%), Postives = 38/68 (55.88%), Query Frame = 1
Query: 7 EVMHIHPEPRAEANNKVLTAFIEGGEPTETPMRVAGLTGAGQVIGVTDTGLDDNSCFFKDEEGS-VPR 207
EV+ + P N V I+ TE P+ AGL G GQVI V DTGLD+ SCFF D++G VP
Sbjct: 328 EVLRVSPRHADRLLNAVARTIIQSATITEAPLTDAGLDGTGQVIQVIDTGLDETSCFFIDDDGEEVPH 395
BLAST of mRNA_Ecto-sp13_S_contig18012.5524.1 vs. uniprot
Match: A0A7S4VZ45_9STRA (Subtilisin n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VZ45_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 2.450e-8 Identity = 28/72 (38.89%), Postives = 41/72 (56.94%), Query Frame = 1
Query: 1 QPEVMHIHPEPRAEANNKVLTAFIEGG----EPTETPMRVAGLTGAGQVIGVTDTGLDDNSCFFKDEEGSVP 204
QPE+ H+ + + N + +GG + ETP+ AG+TGAGQV+ V+DTGLD +C+F D P
Sbjct: 316 QPEICHVEVQGVVDTGNDIAQWLAQGGVGSEDAMETPLYDAGITGAGQVVAVSDTGLDYENCYFMDANAPDP 387
BLAST of mRNA_Ecto-sp13_S_contig18012.5524.1 vs. uniprot
Match: A0A836CIB0_9STRA (Subtilisin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB0_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 8.550e-8 Identity = 34/73 (46.58%), Postives = 40/73 (54.79%), Query Frame = 1
Query: 7 EVMHIHPEPRAEANNKVLTAFIEGGEPTET-----PMRVAGLTGAGQVIGVTDTGLDDNSCFFKDE-EGSVPR 207
EV HI P N V A ++ G P+ AGL G GQVIGV+DTGLDD SCFF+D+ G PR
Sbjct: 416 EVAHITPLHALAHRNDVAQAVVQSGARDGAAHGAKPLWSAGLRGHGQVIGVSDTGLDDASCFFRDDARGRTPR 488 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18012.5524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18012.5524.1 >prot_Ecto-sp13_S_contig18012.5524.1 ID=prot_Ecto-sp13_S_contig18012.5524.1|Name=mRNA_Ecto-sp13_S_contig18012.5524.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=66bp MHIHPEPRAEANNKVLTAFIEGGEPTETPMRVAGLTGAGQVIGVTDTGLDback to top mRNA from alignment at Ecto-sp13_S_contig18012:103..312+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18012.5524.1 ID=mRNA_Ecto-sp13_S_contig18012.5524.1|Name=mRNA_Ecto-sp13_S_contig18012.5524.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=210bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18012:103..312+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18012:103..312+ >mRNA_Ecto-sp13_S_contig18012.5524.1 ID=mRNA_Ecto-sp13_S_contig18012.5524.1|Name=mRNA_Ecto-sp13_S_contig18012.5524.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=198bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18012:103..312+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |