mRNA_Ecto-sp13_S_contig1801.5523.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1801.5523.1 vs. uniprot
Match: A0A6H5KGF5_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE) HSP 1 Score: 672 bits (1735), Expect = 9.780e-241 Identity = 334/357 (93.56%), Postives = 339/357 (94.96%), Query Frame = 3
Query: 96 MRCSVFLACVALTPGIAFNPNNQARLRMQQGFGK-SQSKTPAKLXXXXXXXPPAVPKQTPVRAGELPEDTFSQFPPLTPEQKQTLQKAPGGKATDFPIEVADRIRERHGFEHFDEKLFPGIRLLFADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTELQSATTSSQFQQXXTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHADGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYVRRFAEAGVR 1163
MRCSV LACVALTPG+AFNPNNQARLRMQQGFGK S+S TPAKL PAVPKQTPVRAGELPED FSQFPPLTPEQKQTLQKAP GKAT FP+EVADRIRERHGFEHFDEKLFPGIRLL ADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTELQSATTSSQ QQXXTSTTWFHHYASAPELVAKASLLLGVDDY KWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHA+GGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY RRFAEAGV+
Sbjct: 1 MRCSVLLACVALTPGVAFNPNNQARLRMQQGFGKQSRSNTPAKLKTPAKAPYPAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAPAGKATAFPVEVADRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTELQSATTSSQCQQXXTSTTWFHHYASAPELVAKASLLLGVDDYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYARRFAEAGVK 357
BLAST of mRNA_Ecto-sp13_S_contig1801.5523.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE) HSP 1 Score: 244 bits (624), Expect = 2.270e-70 Identity = 151/381 (39.63%), Postives = 193/381 (50.66%), Query Frame = 3
Query: 252 AVPKQTPVRAGELPEDTFSQFPPLTPEQKQTLQ-------------KAPGGKATDFPIEVADRIRERHGFEHF-------------------------------------------------------DEKLFPGIRLLFADPVVFEVEGFFTPQECDAYIAMST----------------LKKSGRRKGGLAPTELQSATTSSQFQQXX--TSTTWFHHYASAPELVAKASLLLGVD-DYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHADGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1133
A P T R G+LP+D F+ FPPL+P+ +++ + G+ P +V + IR RHG E F LFPG+RLL A+P V V FFT +ECD YI+ S P +SAT + TSTTWFH +++ PEL+AKAS L+GV + +WEE QTVRYRPGE+F WHLDALPP+ ASKGGQR AT+LVYLT M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGEVV G + ++K+IAQLW ++ Y P+VP+ + HE A + ++
Sbjct: 191 AAPAATAARGGQLPDDDFATFPPLSPDTLKSIMGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLEEFAGGRRLLDPEYFGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRERRYTPTVPKQNRHEHAASAVAEF 570
BLAST of mRNA_Ecto-sp13_S_contig1801.5523.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI) HSP 1 Score: 232 bits (592), Expect = 3.280e-68 Identity = 127/246 (51.63%), Postives = 157/246 (63.82%), Query Frame = 3
Query: 441 LFPGIRLLFADPVVFEVEGFFTPQECDAYIAMST------------LKKSGRRKGGLAPTELQSATTSSQFQQXX--TSTTWFHHYASAPELVAKASLLLGVD-DYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHADGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1133
LFPG+RLL A+P V V FFT +ECD YI+ S G P +SAT + TSTTWFH +++ PEL+AKAS L+GV + +WEE QTVRYRPGE+F WHLDALPP+ AS+GGQR AT+LVYLT M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGEVV G + ++K+IAQLW + Y P+VP+ + HE A + ++
Sbjct: 100 LFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRESRYTPTVPKQNRHEHAAAVVAEF 344
BLAST of mRNA_Ecto-sp13_S_contig1801.5523.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA) HSP 1 Score: 233 bits (593), Expect = 2.690e-67 Identity = 128/264 (48.48%), Postives = 165/264 (62.50%), Query Frame = 3
Query: 360 GGKATDFPIEVADRIRERHGFEHFDEKLFPGIRLLFADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTELQSATTSSQFQQXXTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHADGGGATAFRDLGP-----LRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYV 1136
G AT P+ D + + F+ F R+L DP+V V+ FFT +ECD YIAMS +G + G T + + + TSTTWFHHY + PEL+AK+S L G+DD +EEPQTVRY+P ++F WHLDAL P SKGGQRTAT+LVYLT++ + GGAT FRDLGP L+V+PKKG L+FFP+ GG +PFD R LHAGEVV K+ +K+IAQLW + Y P+VP + H AA +PI YV
Sbjct: 183 GFSATATPMATVD-VSKLPPFDKF--------RVLHIDPLVIAVDDFFTHEECDKYIAMSD-PTAGNKDGDAVMTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLDDIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEVVSADCKS-DKWIAQLWLREDSYEPTVPPENVHAAATEPISQYV 435
BLAST of mRNA_Ecto-sp13_S_contig1801.5523.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.200e-64 Identity = 125/245 (51.02%), Postives = 155/245 (63.27%), Query Frame = 3
Query: 438 KLFPGIRLLFADPVVFEVEGFFTPQECDAYIAMST---LKKSGRRKGG--LAPTELQSATT---SSQFQQXXTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHADGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1133
K F R+L DP+V V+ FFTP+ECDA IA ST + K G L P ++ + T S+ + TSTTWFHHYA PEL+AKA L+G++D +EEPQTVRYR E F WHLDAL P+ A KGGQR AT+LVYLT++ GGAT FRDLG PL+VRPKKG L+FFP+ GG P D R LH GE V + ++K+IAQLW + PY P+ P G+SH +A PI DY
Sbjct: 233 KPFSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVITADNNEKEGTTLLPMKIGQSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGINDISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEAVAS-DAEQDKWIAQLWLRETPYTPTAPPGNSHASASSPISDY 476
BLAST of mRNA_Ecto-sp13_S_contig1801.5523.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC) HSP 1 Score: 220 bits (560), Expect = 4.410e-62 Identity = 126/280 (45.00%), Postives = 165/280 (58.93%), Query Frame = 3
Query: 327 PEQKQTLQKAPGGKATDFPIEVADRIRERHGFEHFDEKLFPGIRLLFADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRK--GGLAPTELQSATT---SSQFQQXXTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECG-ASKGGQRTATVLVYLTNMHADGGGATAFRDLG---PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYVR 1139
P Q GG A+ + + E FE F R+L DP+V V+ FFT +ECD Y+ MS ++ + + G L P L + T S+ + TSTTWFHHYA PEL+A+A+ LLG+ ++EEPQTVRYR E+F WHLDAL P +S GQR +T+LVYLT++ ++ GGAT FRDLG PL+VRPKKG L+FFPS GG PFD R LH GE VG+ + EK+IAQLW ++ Y P+ P GS H A I +Y +
Sbjct: 200 PAVSDDSQSRVGGAASSHDCSID--LNELPPFEQF--------RVLHVDPMVIAVDDFFTSEECDKYVQMSIDAENNQDQEAGALQPLLLGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLPGISRFEEPQTVRYRRSEKFTWHLDALSPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEAVGE-DAPNEKWIAQLWLRQRDYTPTAPAGSEHRKATVAIQEYCK 468
BLAST of mRNA_Ecto-sp13_S_contig1801.5523.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA) HSP 1 Score: 211 bits (536), Expect = 4.660e-61 Identity = 115/238 (48.32%), Postives = 147/238 (61.76%), Query Frame = 3
Query: 444 FPGIRLLFADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTEL-QSATTSSQF--QQXXTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHADGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1133
F R+L DP+V V+ F T ECD +A++ K + AP ++ QS T + TSTTWFHHY P+L+AKAS LLG+D+ +WEEPQTVRYR E+F WHLDAL PS+ A GGQR AT++VYL ++ GG+T FRDLG PL+V PKKG LVFFP+ GG PFD R LHAGE V ++ +K+IAQLW + Y P+ P G++H AA I Y
Sbjct: 26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKN-ANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESE-DDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 261
BLAST of mRNA_Ecto-sp13_S_contig1801.5523.1 vs. uniprot
Match: A0A7S4QXQ4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA) HSP 1 Score: 211 bits (536), Expect = 7.900e-60 Identity = 115/238 (48.32%), Postives = 147/238 (61.76%), Query Frame = 3
Query: 444 FPGIRLLFADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTEL-QSATTSSQF--QQXXTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHADGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1133
F R+L DP+V V+ F T ECD +A++ K + AP ++ QS T + TSTTWFHHY P+L+AKAS LLG+D+ +WEEPQTVRYR E+F WHLDAL PS+ A GGQR AT++VYL ++ GG+T FRDLG PL+V PKKG LVFFP+ GG PFD R LHAGE V ++ +K+IAQLW + Y P+ P G++H AA I Y
Sbjct: 123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKN-ANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESE-DDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 358
BLAST of mRNA_Ecto-sp13_S_contig1801.5523.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA) HSP 1 Score: 208 bits (530), Expect = 8.090e-60 Identity = 114/235 (48.51%), Postives = 146/235 (62.13%), Query Frame = 3
Query: 444 FPGIRLLFADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTEL-QSATTSSQF--QQXXTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHADGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPI 1124
F R+L DP++ ++ F TP ECD YI++++ K + AP E+ QS T + TSTTWFHHY L+AKAS LLG+ +WEEPQTVRYR E+F WHLDAL PSE GGQR AT+LVYL ++ GG+T FRDLG PL+V+PKKG L+FFP+ GG PFD R LHAGE V + +K+IAQLW + Y P+ P G+SHEAA + +
Sbjct: 57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSNPKYDKN-ANTAPMEIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIERWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEAVSDESD-DDKWIAQLWLREHVYTPTAPPGNSHEAAVEAV 289
BLAST of mRNA_Ecto-sp13_S_contig1801.5523.1 vs. uniprot
Match: B5Y5K1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5K1_PHATC) HSP 1 Score: 209 bits (531), Expect = 2.650e-58 Identity = 108/234 (46.15%), Postives = 146/234 (62.39%), Query Frame = 3
Query: 444 FPGIRLLFADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTELQSATTSSQFQQXXTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHADGGGATAFRDL----GPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1133
F R+L DP+V ++ FFT ECD Y+A++T + +PT + A +Q TSTT+++H+ PEL+AKAS LLG+ +WEEPQTVRYR E+F WHLDAL P+E GGQR AT+LVY T++ +D GGAT FRDL G L VRP++G L+FFP+ GG +PFD R LH G+ V ++K+I+QLW + Y P+ P G+SH A K I +Y
Sbjct: 196 FEKFRILHVDPLVLGIDDFFTAAECDRYVALATQNQKHNILESRSPTVGKDAAAKAQ----RTSTTYYNHFEGVPELMAKASRLLGLQSIDRWEEPQTVRYRKNEKFTWHLDALGPNENNPGLGGQRLATLLVYHTDLQSDEGGATMFRDLTGTNGRLAVRPRRGAALLFFPAAGGIPNAPFDVRTLHCGQAV-SATSQQDKWISQLWLRQSSYTPTAPPGNSHSQATKAISEY 424 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1801.5523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1801.5523.1 >prot_Ecto-sp13_S_contig1801.5523.1 ID=prot_Ecto-sp13_S_contig1801.5523.1|Name=mRNA_Ecto-sp13_S_contig1801.5523.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp MRCSVFLACVALTPGIAFNPNNQARLRMQQGFGKSQSKTPAKLKTPAKAPback to top mRNA from alignment at Ecto-sp13_S_contig1801:11216..15304+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1801.5523.1 ID=mRNA_Ecto-sp13_S_contig1801.5523.1|Name=mRNA_Ecto-sp13_S_contig1801.5523.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4089bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1801:11216..15304+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1801:11216..15304+ >mRNA_Ecto-sp13_S_contig1801.5523.1 ID=mRNA_Ecto-sp13_S_contig1801.5523.1|Name=mRNA_Ecto-sp13_S_contig1801.5523.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1801:11216..15304+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |