prot_Ecto-sp13_S_contig18007.5521.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18007.5521.1
Unique Nameprot_Ecto-sp13_S_contig18007.5521.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length242
Homology
BLAST of mRNA_Ecto-sp13_S_contig18007.5521.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 1.120e-63
Identity = 122/197 (61.93%), Postives = 154/197 (78.17%), Query Frame = 0
Query:    2 ISNVQFNANGHPSSEVEAGVTSITITTSRDGEDIPLSAPVQMTMRASVATTSSSTPLCAYYNENTGRWEEDGLVAEGVT--MSTSKTAGLRDLNVTCWSFHLSDFTIIAEDIGASFEPVELTAGIGVVLKERDISNMGVLLLLLXXXXLAVVRTASRLADAQTELNRQLARKTDDFYLATGKSRRCPSLTELIKKDP 196
            I+++QF+ANG PSS+V+AGV+SITITTS  G+DI LSAPV+MTMRAS+ATT S++P C YYNE TG W+EDGLV E     M  S   GL  LNVTCWSFHLSDFTI A+++G+ F+ V+LTAGI V LK R+IS MG LLLL  XXX  ++RT +R+AD +T L++QLARKTD+ Y+ATGKSR  P+L  L++ DP
Sbjct: 1216 IASLQFSANGRPSSQVDAGVSSITITTSSGGQDIALSAPVRMTMRASMATTLSNSPSCVYYNEITGLWDEDGLVTEAAITPMDESNADGLTGLNVTCWSFHLSDFTISADEVGSGFQHVDLTAGIAVFLKVREISKMGGLLLLFVXXXXXLLRTTARMADVKTNLSKQLARKTDEVYVATGKSRNRPTLAALVQADP 1412          
BLAST of mRNA_Ecto-sp13_S_contig18007.5521.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 2.370e-54
Identity = 104/167 (62.28%), Postives = 127/167 (76.05%), Query Frame = 0
Query:   32 GEDIPLSAPVQMTMRASVATTSSSTPLCAYYNENTGRWEEDGLVAEGVT--MSTSKTAGLRDLNVTCWSFHLSDFTIIAEDIGASFEPVELTAGIGVVLKERDISNMGVLLLLLXXXXLAVVRTASRLADAQTELNRQLARKTDDFYLATGKSRRCPSLTELIKKDP 196
            GEDI LSAPV+MTMRAS+ATTSS +P CAYYNE TG W+EDGLV E     +  S   GL DLNVTCWSFHLSDFTI A+++G+ F+ V+LTAGI VVL+ RDIS MGVLLLL     L V+RT SR+AD +T L+++L  KTD+ YLATGKSR  P+L  L++ +P
Sbjct:  274 GEDITLSAPVRMTMRASMATTSSKSPSCAYYNELTGLWDEDGLVTEAAITPIDESNAGGLTDLNVTCWSFHLSDFTISADEVGSGFQHVDLTAGIAVVLEVRDISKMGVLLLLFVLLLLVVLRTISRMADVKTNLSKELEGKTDEVYLATGKSRNRPTLGALVQANP 440          
BLAST of mRNA_Ecto-sp13_S_contig18007.5521.1 vs. uniprot
Match: A0A6H5JM67_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM67_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.430e-38
Identity = 95/256 (37.11%), Postives = 149/256 (58.20%), Query Frame = 0
Query:    1 MISNVQFNANGHPSSEVEAGVTSITITTSRDGEDIPLSAPVQMTMRASVATTSSSTPLCAYYNENTGRWEEDGLVAEGVTMSTSKTAGLRDLNVTCWSFHLSDFTIIAEDIGASFEPVELTAGIGVVLKERDISNMGVLLLLLXXXXLAVVRTASRLADAQTELNRQLARKTDDFYLATGKSRRCPSLTELIKKDPLQSKEKEG--------------LHQQSMRRFQSLGRRIEIFLRLLLRYHPWFGIVAPSSS 242
            +++N  FNAN  PS+ V  GVT I ++++ DGEDI L+ PVQ+TMRAS+A+T+   P C YYNE TGRW+ +GL    V + T+      D+ V+C +FHLSDF +   +I   F+PV L AG+ VV + +DI+  G +L +     L +V + SR+AD +++    L  +  D Y+ TG  +R P+L ++  KD  Q+                   L +++ +RF+S  + +   L+ +L +HPW GI+APS +
Sbjct:  466 VVTNQLFNANDRPSALVNGGVTQIKVSSTSDGEDIALAGPVQLTMRASMASTAQL-PSCLYYNEETGRWDSEGLAIGAVAVPTNAGDSAVDVLVSCVTFHLSDFGVATTEIEPVFQPVTLEAGLSVV-RGKDITVWGFVLTVGALILLGIVWSVSRMADHRSKTAEMLQTRAYDHYIETGHPQRLPTLEDI--KDLRQTXXXXXXXXXXXXDESFVRYLRRKTFQRFRSWLQLMWALLKHVLFFHPWAGIIAPSGT 717          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18007.5521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4X3_ECTSI1.120e-6361.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLT2_9PHAE2.370e-5462.28GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JM67_9PHAE1.430e-3837.11GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000203GPS motifPFAMPF01825GPScoord: 57..107
e-value: 1.0E-7
score: 32.4
IPR000203GPS motifPROSITEPS50221GPScoord: 56..113
score: 9.234
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..242
NoneNo IPR availableTMHMMTMhelixcoord: 133..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18007contigEcto-sp13_S_contig18007:1387..3500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18007.5521.1mRNA_Ecto-sp13_S_contig18007.5521.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18007 1387..3500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18007.5521.1 ID=prot_Ecto-sp13_S_contig18007.5521.1|Name=mRNA_Ecto-sp13_S_contig18007.5521.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
MISNVQFNANGHPSSEVEAGVTSITITTSRDGEDIPLSAPVQMTMRASVA
TTSSSTPLCAYYNENTGRWEEDGLVAEGVTMSTSKTAGLRDLNVTCWSFH
LSDFTIIAEDIGASFEPVELTAGIGVVLKERDISNMGVLLLLLVLLLLAV
VRTASRLADAQTELNRQLARKTDDFYLATGKSRRCPSLTELIKKDPLQSK
EKEGLHQQSMRRFQSLGRRIEIFLRLLLRYHPWFGIVAPSSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000203GPS