mRNA_Ecto-sp13_S_contig17988.5503.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17988.5503.1 vs. uniprot
Match: A0A6H5K485_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K485_9PHAE) HSP 1 Score: 222 bits (566), Expect = 2.370e-62 Identity = 103/112 (91.96%), Postives = 105/112 (93.75%), Query Frame = 1
Query: 1 LTNFHWPDSELSYTSTNGDTVVERISEYGDECYGHGGSDVFPFGLLDNVDDALQIKTGMQGNGETGNTLTNREALAIMDGRFNMLPYVYDNFKWEHCLDSGIDFDDAWDAST 336
LTNFHWPDSELSYT TNGDTVVE S YGD+CYGHGGSDVFPFGLLDN DDAL+IKTGMQGNGETGNTLTNREALA MDGRFN LPYVYDNFKWEHCLDSGIDFDDAWDAST
Sbjct: 694 LTNFHWPDSELSYTDTNGDTVVETTSNYGDKCYGHGGSDVFPFGLLDNDDDALKIKTGMQGNGETGNTLTNREALANMDGRFNNLPYVYDNFKWEHCLDSGIDFDDAWDAST 805
BLAST of mRNA_Ecto-sp13_S_contig17988.5503.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI) HSP 1 Score: 192 bits (488), Expect = 7.080e-52 Identity = 87/120 (72.50%), Postives = 98/120 (81.67%), Query Frame = 1
Query: 1 LTNFHWPDSELSYTSTNGDTVVERISEYGDECYGHGGSDVFPFGLLDNVDDALQIKTGMQGNGETGNTLTNREALAIMDGRFNMLPYVYDNFKWEHCLDSGIDFDDAWDASTAWRPDRKG 360
LT+FHWPDSE SYT ++G+ VVE YGD C+GHGGSDVFPF LLD DDA QIKTGM GNGETGN LTNRE LA++D RFNMLPYVYDNF+W+HCL GIDF+DAWDAST+ D KG
Sbjct: 575 LTDFHWPDSEFSYTDSDGNIVVETTGIYGDTCHGHGGSDVFPFDLLDGDDDAFQIKTGMPGNGETGNKLTNREVLAVLDARFNMLPYVYDNFRWDHCLKDGIDFEDAWDASTSSSADNKG 694
BLAST of mRNA_Ecto-sp13_S_contig17988.5503.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 186 bits (471), Expect = 1.560e-49 Identity = 82/110 (74.55%), Postives = 95/110 (86.36%), Query Frame = 1
Query: 1 LTNFHWPDSELSYTSTNGDTVVERISEYGDECYGHGGSDVFPFGLLDNVDDALQIKTGMQGNGETGNTLTNREALAIMDGRFNMLPYVYDNFKWEHCLDSGIDFDDAWDA 330
LT+FHWPDSE SY+ ++G+TVVE S YGD C+GHGGSDVFPFGLLD+ DDA +IKTGMQGN ETGN LTNRE LA++D R+NMLPYVYDNF+W+HCL GIDF DAWDA
Sbjct: 573 LTDFHWPDSEFSYSDSDGNTVVETTSTYGDTCHGHGGSDVFPFGLLDDDDDAFKIKTGMQGNEETGNKLTNREVLAVLDARYNMLPYVYDNFRWDHCLQDGIDFYDAWDA 682
BLAST of mRNA_Ecto-sp13_S_contig17988.5503.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI) HSP 1 Score: 179 bits (455), Expect = 2.790e-48 Identity = 81/120 (67.50%), Postives = 98/120 (81.67%), Query Frame = 1
Query: 1 LTNFHWPDSELSYTSTNGDTVVERISEYGDECYGHGGSDVFPFGLLDNVDDALQIKTGMQGNGETGNTLTNREALAIMDGRFNMLPYVYDNFKWEHCLDSGIDFDDAWDASTAWRPDRKG 360
LT+F+WPDSE SY+ ++G+TVVE S+YGD C+GH GSDVFPFGLL++ D +IKTGM GN ETGN LTNRE LA++D R+NMLPYVYD+F+W+HCL GIDF DAWDASTA RKG
Sbjct: 402 LTDFYWPDSEFSYSDSDGNTVVETTSKYGDTCHGHSGSDVFPFGLLEDDDAGFKIKTGMLGNEETGNKLTNREVLAVLDARYNMLPYVYDDFRWDHCLQDGIDFYDAWDASTASNDGRKG 521
BLAST of mRNA_Ecto-sp13_S_contig17988.5503.1 vs. uniprot
Match: D8LC47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC47_ECTSI) HSP 1 Score: 142 bits (358), Expect = 3.800e-36 Identity = 66/116 (56.90%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 LTNFHWPDSELSYTSTNGDTVVERISEYGDECYGHGGSDVFPFGLLDNVDDALQIKTGMQGNGETGNTLTNREALAIMDGRFNMLPYVYDNFKWEHCLDSGIDFDDAWDASTAWRP 348
+T+F WPD +++ T +G VE IS YG+ C GH GSDVFPFGLLD+ D IKTG++GN +TGN LTNREAL D R N LPYVYD FKW HC G++FDDAW+ + A P
Sbjct: 145 ITDFTWPDDDVTVTKPDGTVEVESISLYGETCSGHRGSDVFPFGLLDSDTDGFTIKTGIRGNLDTGNQLTNREALQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAWENAKARGP 260
BLAST of mRNA_Ecto-sp13_S_contig17988.5503.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 144 bits (364), Expect = 1.540e-34 Identity = 64/112 (57.14%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 1 LTNFHWPDSELSYTSTNGDTVVERISEYGDECYGHGGSDVFPFGLLDNVDDALQIKTGMQGNGETGNTLTNREALAIMDGRFNMLPYVYDNFKWEHCLDSGIDFDDAWDAST 336
+T++ WPD++++YT+ +G V E +SEY + C+GH GSDVFPFGLLD D +IKTG+ N TGN LTNREAL D R N LPYVYD F WEHC G DF DAW +ST
Sbjct: 633 ITDWSWPDADVTYTTPDGTVVTESLSEYEESCFGHHGSDVFPFGLLDTDTDGFEIKTGISFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHCAADGYDFGDAWQSST 744
BLAST of mRNA_Ecto-sp13_S_contig17988.5503.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 142 bits (358), Expect = 9.390e-34 Identity = 66/116 (56.90%), Postives = 80/116 (68.97%), Query Frame = 1
Query: 1 LTNFHWPDSELSYTSTNGDTVVERISEYGDECYGHGGSDVFPFGLLDNVDDALQIKTGMQGNGETGNTLTNREALAIMDGRFNMLPYVYDNFKWEHCLDSGIDFDDAWDASTAWRP 348
+T+F WPD +++ T +G VE IS YGD C GH GSDVFPFGLLD+ D IKTG++GN +TGN LTNRE L D R N LPYVYD FKW HC G++FDDAW+ + A P
Sbjct: 613 ITDFTWPDGDVTVTKPDGTVEVESISLYGDTCTGHRGSDVFPFGLLDSDTDDFTIKTGIRGNPDTGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAWENAKARGP 728
BLAST of mRNA_Ecto-sp13_S_contig17988.5503.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 135 bits (339), Expect = 3.260e-31 Identity = 61/116 (52.59%), Postives = 79/116 (68.10%), Query Frame = 1
Query: 1 LTNFHWPDSELSYTSTNGDTVVERISEYGDECYGHGGSDVFPFGLLDNVDDALQIKTGMQGNGETGNTLTNREALAIMDGRFNMLPYVYDNFKWEHCLDSGIDFDDAWDASTAWRP 348
+T+F WPD +++ T +G VE +S YG+ C GHGGSDVFPFG+LD+ D ++KTG++G E GNTLTNRE L D R N + YVYD FKW HC G DF+DAW+ + RP
Sbjct: 648 ITDFTWPDDDVTITKPDGTVEVESLSLYGETCQGHGGSDVFPFGILDSDTDGFEVKTGVKGM-ENGNTLTNRELLQAFDARSNSVSYVYDTFKWTHCEADGFDFNDAWNGAAQARP 762
BLAST of mRNA_Ecto-sp13_S_contig17988.5503.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE) HSP 1 Score: 134 bits (337), Expect = 5.640e-31 Identity = 69/114 (60.53%), Postives = 81/114 (71.05%), Query Frame = 1
Query: 16 WPDSELSYTSTNGDTVVERISEYGDECYGHGGSDVFPFGLLDNVDDALQIKTGMQGNGETGNTLTNREALAIMDGRFNMLPYVYDNFKWEHCLDSGIDFDDAWD-ASTAWRPDR 354
WPD++ S S+N E IS YGD+C GHGGSDVFPF LLD+ D +IKTGM+GN E GN+ TNRE LA MD R N L YVYD FKW+HCL SG DFD A+D +STA D+
Sbjct: 616 WPDADAS--SSN-----EMISRYGDDCVGHGGSDVFPFNLLDSDHDGFEIKTGMKGNPEIGNSFTNREVLAAMDPRVNQLSYVYDTFKWDHCLGSGYDFDTAFDYSSTASAEDK 722
BLAST of mRNA_Ecto-sp13_S_contig17988.5503.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 124 bits (312), Expect = 1.130e-27 Identity = 63/138 (45.65%), Postives = 88/138 (63.77%), Query Frame = 1
Query: 1 LTNFHWPDSELSYTSTNGDTVVERISEYGDECYGHGGSDVFPFGLLDNVDDALQIKTGMQGNG-ETGNTLTNREALAIMDGRFNMLPYVYDNFKWEHCLDSGIDFDDAW------DASTAWRPD------RKGPKATS 375
+T+F WPD++++YT+++G T + IS+Y +EC GH GSDVFPF +L N + ++TG++G+ GNT+TNRE LA D R N LPYVYD F+W HC + G D DAW +AS P +KGP+A S
Sbjct: 595 VTDFEWPDADVTYTASDGTTYSQPISKYSEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAWLAKGDEEASRGEGPGGQAMSAKKGPRAVS 732 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17988.5503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17988.5503.1 >prot_Ecto-sp13_S_contig17988.5503.1 ID=prot_Ecto-sp13_S_contig17988.5503.1|Name=mRNA_Ecto-sp13_S_contig17988.5503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp MQGNGETGNTLTNREALAIMDGRFNMLPYVYDNFKWEHCLDSGIDFDDAWback to top mRNA from alignment at Ecto-sp13_S_contig17988:988..2860+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17988.5503.1 ID=mRNA_Ecto-sp13_S_contig17988.5503.1|Name=mRNA_Ecto-sp13_S_contig17988.5503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17988:988..2860+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17988:988..2860+ >mRNA_Ecto-sp13_S_contig17988.5503.1 ID=mRNA_Ecto-sp13_S_contig17988.5503.1|Name=mRNA_Ecto-sp13_S_contig17988.5503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=252bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17988:988..2860+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |