prot_Ecto-sp13_S_contig1.3.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1.3.1
Unique Nameprot_Ecto-sp13_S_contig1.3.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length56
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1.3.1 vs. uniprot
Match: D7G1Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z8_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 1.820e-9
Identity = 37/59 (62.71%), Postives = 40/59 (67.80%), Query Frame = 0 
Query:    1 MQCKTTCDFSVSWANYR-CTLSTEAVAGQTPSEVCA--RTLPGSKHRPVEIVERVSRRP 56
            +QCKTT +        + CTLS EAVAGQTPSE      TLPGSKHRPVEIVER S RP
Sbjct:   63 LQCKTTYELQRLVGGLQVCTLSAEAVAGQTPSEDKHDNSTLPGSKHRPVEIVERASSRP 121
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BLAST of mRNA_Ecto-sp13_S_contig1.3.1 vs. uniprot
Match: D7FSN5_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN5_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 2.070e-9
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 0 
Query:    1 MQCKTTCDFSVSWANYRCTLSTEAVAGQTPSEV 33
            +QC+TTCDFSVSWA+ RCTLS EAVAGQTPSEV
Sbjct:  361 LQCETTCDFSVSWADCRCTLSAEAVAGQTPSEV 393
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1Z8_ECTSI1.820e-962.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSN5_ECTSI2.070e-984.85Putative scytonemin-related tyrosinase n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1contigEcto-sp13_S_contig1:21666..22115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1.3.1mRNA_Ecto-sp13_S_contig1.3.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1 21666..22730 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1.3.1 ID=prot_Ecto-sp13_S_contig1.3.1|Name=mRNA_Ecto-sp13_S_contig1.3.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp
MQCKTTCDFSVSWANYRCTLSTEAVAGQTPSEVCARTLPGSKHRPVEIVE
RVSRRP
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