prot_Ecto-sp13_S_contig17980.5498.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17980.5498.1
Unique Nameprot_Ecto-sp13_S_contig17980.5498.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17980.5498.1 vs. uniprot
Match: D7FT19_ECTSI (ELM2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT19_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 2.590e-34
Identity = 64/80 (80.00%), Postives = 65/80 (81.25%), Query Frame = 0 
Query:    1 MGAPEERPPVRAKQYKRYLAPHADAHINVGPEYQAAIPALEPSVAFIPPTPPRLSEQGTAEASXXXXXXXXXXXASEMDE 80
            M   EERPPVRAKQYKRYLAPHA+AHINVGPEYQAAIPALEPSVAFIPPTPPRLSEQ TAEAS           ASEMDE
Sbjct:    1 MDVSEERPPVRAKQYKRYLAPHANAHINVGPEYQAAIPALEPSVAFIPPTPPRLSEQRTAEASAAAA-------ASEMDE 73
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17980.5498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT19_ECTSI2.590e-3480.00ELM2 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000949ELM2 domainPFAMPF01448ELM2coord: 27..42
e-value: 3.2E-4
score: 21.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17980contigEcto-sp13_S_contig17980:2977..3527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17980.5498.1mRNA_Ecto-sp13_S_contig17980.5498.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17980 2977..3527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17980.5498.1 ID=prot_Ecto-sp13_S_contig17980.5498.1|Name=mRNA_Ecto-sp13_S_contig17980.5498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
MGAPEERPPVRAKQYKRYLAPHADAHINVGPEYQAAIPALEPSVAFIPPT
PPRLSEQGTAEASAAASAAAAAVAASEMDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000949ELM2_dom