mRNA_Ecto-sp13_S_contig17951.5482.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17951.5482.1 vs. uniprot
Match: A0A6H5JGT6_9PHAE (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT6_9PHAE) HSP 1 Score: 211 bits (538), Expect = 5.750e-65 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
Query: 1 AGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQ 312
AGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQ
Sbjct: 46 AGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQ 149
BLAST of mRNA_Ecto-sp13_S_contig17951.5482.1 vs. uniprot
Match: W7TSI8_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSI8_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.950e-36 Identity = 68/106 (64.15%), Postives = 81/106 (76.42%), Query Frame = 1
Query: 1 AGRGTFSQGST--GWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQ 312
AGRG F + S GW+MA V RG SFE+AKLR +DV+ ALK++SGTVV NS G + LAG+CLD +EA +PV LNLY+TA GQ TSAPPHTDKQDVFV+QTQ
Sbjct: 146 AGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQ 251
BLAST of mRNA_Ecto-sp13_S_contig17951.5482.1 vs. uniprot
Match: A0A7S2CTT2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CTT2_9EUKA) HSP 1 Score: 127 bits (319), Expect = 6.210e-35 Identity = 64/103 (62.14%), Postives = 77/103 (74.76%), Query Frame = 1
Query: 1 AGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQT 309
AGRG G GW+MAPVS PRG SFEDAK+R+ DV A+K GTVV NSAGA++ L CL M+A ++P CLNLY+TA G +TSAPPHTDKQDVFV+Q+
Sbjct: 74 AGRGIPDNG--GWKMAPVSKPRGSSFEDAKMRYVDVVEAMK--LGTVVFNSAGAHVPRLGSACLAAMDAFELPNCLNLYVTAKGTETSAPPHTDKQDVFVLQS 172
BLAST of mRNA_Ecto-sp13_S_contig17951.5482.1 vs. uniprot
Match: A0A7S3TKE7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TKE7_9SPIT) HSP 1 Score: 122 bits (307), Expect = 8.550e-34 Identity = 63/103 (61.17%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 1 AGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQT 309
AG G GS GW+MA VS PRG S+EDAKLR+ DV + ++ GTVV NSAGA+I LA +CL +EA +P CLNLY++ G KTSAPPHTDKQDVFV+QT
Sbjct: 10 AGIGISDAGS-GWKMAAVSEPRGTSYEDAKLRYIDVADGMQR--GTVVFNSAGAHIPKLAAVCLAALEAFGLPNCLNLYLSGRGLKTSAPPHTDKQDVFVLQT 109
BLAST of mRNA_Ecto-sp13_S_contig17951.5482.1 vs. uniprot
Match: A0A7S2G032_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G032_9STRA) HSP 1 Score: 118 bits (296), Expect = 4.890e-32 Identity = 60/103 (58.25%), Postives = 73/103 (70.87%), Query Frame = 1
Query: 1 AGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQT 309
AGRG S G GW+M VS PRG SFEDAK+R+ DV+ +L + GTVV NSAG+ L+ ICL ++ D+P CLNLY+T G TSAPPHTDKQDV V+QT
Sbjct: 7 AGRG-ISDGIGGWKMGAVSVPRGNSFEDAKMRYVDVEASLSK--GTVVFNSAGSNFDKLSAICLAALDVFDLPNCLNLYLTGVGTATSAPPHTDKQDVMVIQT 106
BLAST of mRNA_Ecto-sp13_S_contig17951.5482.1 vs. uniprot
Match: A0A0M0K7A9_9EUKA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K7A9_9EUKA) HSP 1 Score: 123 bits (308), Expect = 3.380e-31 Identity = 62/104 (59.62%), Postives = 77/104 (74.04%), Query Frame = 1
Query: 1 AGRGTFSQ-GSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQT 309
AGRG G GW+MA VS PRG SFEDAK+R+ DV+ A+++ GTVV NSAGA+I L +CL ++A +P CLNLY+TA G TSAPPHTDKQDVFV+Q+
Sbjct: 75 AGRGIAEDLGDGGWKMAAVSQPRGSSFEDAKMRYVDVQKAMED--GTVVFNSAGAHISRLGSMCLAALDAFGLPNCLNLYVTAKGCATSAPPHTDKQDVFVLQS 176
BLAST of mRNA_Ecto-sp13_S_contig17951.5482.1 vs. uniprot
Match: A0A7S1UD86_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=5 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UD86_9STRA) HSP 1 Score: 124 bits (310), Expect = 6.710e-31 Identity = 63/104 (60.58%), Postives = 79/104 (75.96%), Query Frame = 1
Query: 1 AGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQ 312
AGRGT +Q +GW+MAPV RG SF DAK+ +DDV A++ +GTVV NSAGA+I L+ + L ++A P CLNLY+TA G+KTSAPPHTDKQDVFV+QTQ
Sbjct: 109 AGRGT-TQMRSGWKMAPVGQVRGSSFLDAKMNYDDVVTAME--AGTVVFNSAGAHIPKLSAVSLAALDAFGYPTCLNLYLTAKGKKTSAPPHTDKQDVFVIQTQ 209
BLAST of mRNA_Ecto-sp13_S_contig17951.5482.1 vs. uniprot
Match: A0A7S2XYX3_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYX3_9STRA) HSP 1 Score: 120 bits (302), Expect = 7.030e-30 Identity = 61/105 (58.10%), Postives = 77/105 (73.33%), Query Frame = 1
Query: 1 AGRGTFSQ-GSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQ 312
AGRG + G GW+MA V +GK+ K++ +DV+ AL ++SGTVV NSAGA + L+G+CLDV L +P LNLY+TAAGQ TSAPPHTDKQDVFV+QTQ
Sbjct: 142 AGRGLVDEDGRAGWQMARVG--KGKASSPKKMKVEDVRKALSQRSGTVVFNSAGANVPALSGVCLDVASVLQLPTNLNLYLTAAGQTTSAPPHTDKQDVFVVQTQ 244
BLAST of mRNA_Ecto-sp13_S_contig17951.5482.1 vs. uniprot
Match: A0A7S3WNN0_EMIHU (Bifunctional lysine-specific demethylase and histidyl-hydroxylase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WNN0_EMIHU) HSP 1 Score: 114 bits (286), Expect = 1.990e-29 Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 34 GWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQ 306
GW+MAPVS PRG S+EDAKLR+ DV ++ GTVV NSAGA++ L ICL + A +P CLN+Y+T K SAPPHTDKQDVFV+Q
Sbjct: 140 GWKMAPVSQPRGSSYEDAKLRYVDVAAGIER--GTVVFNSAGAHVPKLGAICLAALRAFGLPNCLNMYLTGPSVKQSAPPHTDKQDVFVLQ 228
BLAST of mRNA_Ecto-sp13_S_contig17951.5482.1 vs. uniprot
Match: R1BJP6_EMIHU (JmjC domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BJP6_EMIHU) HSP 1 Score: 114 bits (286), Expect = 5.610e-29 Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 34 GWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQ 306
GW+MAPVS PRG S+EDAKLR+ DV ++ GTVV NSAGA++ L ICL + A +P CLN+Y+T K SAPPHTDKQDVFV+Q
Sbjct: 120 GWKMAPVSQPRGSSYEDAKLRYVDVAAGIER--GTVVFNSAGAHVPKLGAICLAALRAFGLPNCLNMYLTGPSVKQSAPPHTDKQDVFVLQ 208 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17951.5482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17951.5482.1 >prot_Ecto-sp13_S_contig17951.5482.1 ID=prot_Ecto-sp13_S_contig17951.5482.1|Name=mRNA_Ecto-sp13_S_contig17951.5482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp AGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNback to top mRNA from alignment at Ecto-sp13_S_contig17951:2452..3458+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17951.5482.1 ID=mRNA_Ecto-sp13_S_contig17951.5482.1|Name=mRNA_Ecto-sp13_S_contig17951.5482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1007bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17951:2452..3458+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17951:2452..3458+ >mRNA_Ecto-sp13_S_contig17951.5482.1 ID=mRNA_Ecto-sp13_S_contig17951.5482.1|Name=mRNA_Ecto-sp13_S_contig17951.5482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=312bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17951:2452..3458+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |