mRNA_Ecto-sp13_S_contig17944.5477.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17944.5477.1 vs. uniprot
Match: D8LFV5_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV5_ECTSI) HSP 1 Score: 194 bits (492), Expect = 3.160e-62 Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 1
Query: 1 ISSGYFAGLLSSSFMAGRVISAYFWGIIADRCGRRPVVLFSLVSTGVLAVAFGFSTTFLWALACRFSLGLLNATTVIFPTLVSEICGKEHEVVGLGAVTGDSIACRRGT 327
+SSGYFAGLLSSSFM GRVISAYFWGI+ADRCGRRPVVL SL STG LAVAFGFSTTFLWALACRF LGLLN TVIFPTLVSEICGKEHEVVGLGAVT + +ACRRGT
Sbjct: 1 MSSGYFAGLLSSSFMFGRVISAYFWGIVADRCGRRPVVLLSLASTGGLAVAFGFSTTFLWALACRFLLGLLNGMTVIFPTLVSEICGKEHEVVGLGAVTSEPVACRRGT 109
BLAST of mRNA_Ecto-sp13_S_contig17944.5477.1 vs. uniprot
Match: A0A6H5JZQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ3_9PHAE) HSP 1 Score: 194 bits (492), Expect = 6.600e-58 Identity = 97/109 (88.99%), Postives = 100/109 (91.74%), Query Frame = 1
Query: 1 ISSGYFAGLLSSSFMAGRVISAYFWGIIADRCGRRPVVLFSLVSTGVLAVAFGFSTTFLWALACRFSLGLLNATTVIFPTLVSEICGKEHEVVGLGAVTGDSIACRRGT 327
+SSGYFAGLLSSSFM GRVISAYFWGIIADRCGRRPVVL SL STG LAVAFGFSTTFLWALACRF LGLLN TVIFP+LVSEICGKEHEVVGLGAVT + IACRRGT
Sbjct: 1 MSSGYFAGLLSSSFMVGRVISAYFWGIIADRCGRRPVVLLSLASTGGLAVAFGFSTTFLWALACRFLLGLLNGMTVIFPSLVSEICGKEHEVVGLGAVTSEPIACRRGT 109
BLAST of mRNA_Ecto-sp13_S_contig17944.5477.1 vs. uniprot
Match: A0A6H5JCE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE3_9PHAE) HSP 1 Score: 144 bits (362), Expect = 1.060e-39 Identity = 69/82 (84.15%), Postives = 74/82 (90.24%), Query Frame = 1
Query: 79 IIADRCGRRPVVLFSLVSTGVLAVAFGFSTTFLWALACRFSLGLLNATTVIFPTLVSEICGKEHEVVGLGAVTGDSIACRRG 324
+I DRCGRRPVVLFSL STGVLAVAFGFSTTFLW+LACRF LGLLN VIFPTLVSEICGKEHEVVGLGA+T + +ACRRG
Sbjct: 1 MITDRCGRRPVVLFSLASTGVLAVAFGFSTTFLWSLACRFLLGLLNRMAVIFPTLVSEICGKEHEVVGLGAMTSEPVACRRG 82
BLAST of mRNA_Ecto-sp13_S_contig17944.5477.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI) HSP 1 Score: 114 bits (286), Expect = 1.940e-27 Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 10 GYFAGLLSSSFMAGRVISAYFWGIIADRCGRRPVVLFSLVSTGVLAVAFGFSTTFLWALACRFSLGLLNATTVIFPTLVSEICGKEHEVVGLGAVTG 300
GY+AG +SS+FM GRV S+YFWG AD GR PV+ L S VL++AFG ST+FLWAL CRF LG+LN I + SE+CGKEHE G+ V G
Sbjct: 69 GYYAGYVSSAFMVGRVGSSYFWGRFADSHGRLPVIYAGLTSMVVLSIAFGLSTSFLWALGCRFLLGVLNGLLGISKAMTSEVCGKEHEATGMAYVLG 165
BLAST of mRNA_Ecto-sp13_S_contig17944.5477.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE) HSP 1 Score: 109 bits (273), Expect = 1.140e-25 Identity = 55/99 (55.56%), Postives = 67/99 (67.68%), Query Frame = 1
Query: 10 GYFAGLLSSSFMAGRVISAYFWGIIADRCGRRPVVLFSLVSTGVLAVAFGFSTTFLWALACRFSLGLLNATTVIFPTLVSEICGKEHEVVGLGAVTGDS 306
GY+AG L+S+FM GR ++ ADR GR PVV L S GVL++AFG ST F WAL CRF LG +NA I ++SEICGK+HE VG+G VTG S
Sbjct: 116 GYYAGCLASAFMVGRFATSXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNALMGISKCMISEICGKQHETVGMGYVTGCS 214
BLAST of mRNA_Ecto-sp13_S_contig17944.5477.1 vs. uniprot
Match: A0A6H5L4Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q8_9PHAE) HSP 1 Score: 106 bits (265), Expect = 9.900e-25 Identity = 53/97 (54.64%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 10 GYFAGLLSSSFMAGRVISAYFWGIIADRCGRRPVVLFSLVSTGVLAVAFGFSTTFLWALACRFSLGLLNATTVIFPTLVSEICGKEHEVVGLGAVTG 300
GY+AG L+S+FM GR ADR GR PVV L S GVL++AFG ST F WAL CRF LG +N I ++SEICGK+HE VG+G VTG
Sbjct: 80 GYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHEKVGMGYVTG 176
BLAST of mRNA_Ecto-sp13_S_contig17944.5477.1 vs. uniprot
Match: D8LRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH7_ECTSI) HSP 1 Score: 107 bits (266), Expect = 1.010e-24 Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 10 GYFAGLLSSSFMAGRVISAYFWGIIADRCGRRPVVLFSLVSTGVLAVAFGFSTTFLWALACRFSLGLLNATTVIFPTLVSEICGKEHEVVGLGAVTG 300
GY+AG L+S+FM GR ADR GR PVV L S GVL++AFG ST F WAL CRF LG +N I ++SEICGK+HE VG+G +TG
Sbjct: 48 GYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHETVGMGYITG 144
BLAST of mRNA_Ecto-sp13_S_contig17944.5477.1 vs. uniprot
Match: A0A7R9UB92_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB92_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.600e-22 Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 10 GYFAGLLSSSFMAGRVISAYFWGIIADRCGRRPVVLFSLVSTGVLAVAFGFSTTFLWALACRFSLGLLNATTVIFPTLVSEICGKEHEVVGLGAVTG 300
GY+AG + ++FMAGR +S++FWGI ADR GR+PV+L S VL+V FG STTF AL RF +GL N T+V+E+C ++ + +G VTG
Sbjct: 69 GYYAGFVGAAFMAGRTVSSFFWGIYADRYGRKPVILIGCASIAVLSVLFGVSTTFSMALVTRFLIGLGNGIAGTSKTIVAELCSEDFQPRAMGFVTG 165
BLAST of mRNA_Ecto-sp13_S_contig17944.5477.1 vs. uniprot
Match: A0A7J7N9H9_9MAGN (MFS domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7N9H9_9MAGN) HSP 1 Score: 99.8 bits (247), Expect = 3.880e-22 Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 10 GYFAGLLSSSFMAGRVISAYFWGIIADRCGRRPVVLFSLVSTGVLAVAFGFSTTFLWALACRFSLGLLNATTVIFPTLVSEICGKEHEVVGLGAVT 297
GY+AG + SSFM GR +++YFWG+IADR GR+PVV+F L++ V FG ST+F A+A RF LG LN SEIC EH+ +GL V+
Sbjct: 78 GYYAGFVGSSFMFGRALTSYFWGVIADRYGRKPVVIFGLITIVVFNTLFGLSTSFWMAIATRFLLGSLNGILGPIRAYASEICRDEHQAMGLSLVS 173
BLAST of mRNA_Ecto-sp13_S_contig17944.5477.1 vs. uniprot
Match: A0A1D1ZE51_9ARAE (Putative peptide/nitrate transporter At3g43790 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZE51_9ARAE) HSP 1 Score: 95.5 bits (236), Expect = 5.600e-21 Identity = 42/96 (43.75%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 10 GYFAGLLSSSFMAGRVISAYFWGIIADRCGRRPVVLFSLVSTGVLAVAFGFSTTFLWALACRFSLGLLNATTVIFPTLVSEICGKEHEVVGLGAVT 297
GY+AG + SSFM GR +++ FWG++ADR GR+PV++F +S + FG S++F A+ RF LG LNA SEIC +EH+ +G+ +T
Sbjct: 77 GYYAGYVGSSFMFGRALTSLFWGVVADRYGRKPVIVFGTISVIIFNTLFGLSSSFWMAILTRFLLGCLNAVFAPIKAYASEICRQEHQSIGMSVIT 172 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17944.5477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17944.5477.1 >prot_Ecto-sp13_S_contig17944.5477.1 ID=prot_Ecto-sp13_S_contig17944.5477.1|Name=mRNA_Ecto-sp13_S_contig17944.5477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=109bp ISSGYFAGLLSSSFMAGRVISAYFWGIIADRCGRRPVVLFSLVSTGVLAVback to top mRNA from alignment at Ecto-sp13_S_contig17944:170..1301- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17944.5477.1 ID=mRNA_Ecto-sp13_S_contig17944.5477.1|Name=mRNA_Ecto-sp13_S_contig17944.5477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1132bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17944:170..1301- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17944:170..1301- >mRNA_Ecto-sp13_S_contig17944.5477.1 ID=mRNA_Ecto-sp13_S_contig17944.5477.1|Name=mRNA_Ecto-sp13_S_contig17944.5477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=327bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17944:170..1301- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |