prot_Ecto-sp13_S_contig17921.5468.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17921.5468.1
Unique Nameprot_Ecto-sp13_S_contig17921.5468.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length386
Homology
BLAST of mRNA_Ecto-sp13_S_contig17921.5468.1 vs. uniprot
Match: A0A6H5JI88_9PHAE (Myb-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI88_9PHAE)

HSP 1 Score: 495 bits (1275), Expect = 2.860e-164
Identity = 320/472 (67.80%), Postives = 329/472 (69.70%), Query Frame = 0
Query:    1 MFPNVAEEERTRDSDAGTAAQAXXXXXXXXXXVPAASNGSPPXXXXXXXPAALSVGPGVAAPGAVSSPSPALAPLSAHHNPLGSFPSRSPSPQAPATPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILDAVAGGSGLCPTGDQPRPDGSSVRRGSLLGLGPVDAVLIFDEGPPITTRTAXXXXXXXXXXXXXXSRAALTAALQSLLTLPQCARRSSAPRAIRSMSATGGVAADENGRVDGGGVTTAAGRAEGENVVTVVRYVADGTIEETLEGEGDSGIGSLGA--------------------------------------------------------------------------------------GVEGIVVRCSLEGKTFLNQGGAGSASASEGTEAISLSGTKRKAADXXXXXXXCNGADMLGADGKHWSEGAPPLRRTCPWSPVGVEDILVEEMVQVS 386
            MFPNVAEEE TR SDAGTA  A  XXXXXXXX          XXXXXXX AA+ VGPGVAAPGAVSSPSPALAPLSAHHNPLGSFPSRSPSPQAPATPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAIL+AVAGGSGLCP G+QPRPDGSSVR+GSL GLGP+DAVLIFDEGPPIT  TA XXXXXXXX       AAL AALQSLLTLP CARRSSAPRAIRSM ATGG AADENGRVD GGV TAAGRAEGE VVTVVRYV DGTIEETLEGEGD GI SLG                                                                                       GVEGI VRCSLEGKT+L QG A SASASEGTEA+SLSGTKRKA           GADMLGADGKHWSEGAPPLRRTCPWSPV VEDILVEEMVQ++
Sbjct:    1 MFPNVAEEESTRGSDAGTATPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXAAIRVGPGVAAPGAVSSPSPALAPLSAHHNPLGSFPSRSPSPQAPATPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILEAVAGGSGLCPNGEQPRPDGSSVRKGSLCGLGPIDAVLIFDEGPPITRATATXXXXXXXX-------AALAAALQSLLTLPLCARRSSAPRAIRSMLATGGGAADENGRVDRGGVATAAGRAEGERVVTVVRYVVDGTIEETLEGEGDKGISSLGGRPLGEVLFGPTYSDRGSAKPVSAGATSEAASAPEIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPPAAGAEVGVEGIAVRCSLEGKTYLKQGEAASASASEGTEAVSLSGTKRKAGGG-------GGADMLGADGKHWSEGAPPLRRTCPWSPVRVEDILVEEMVQMN 458          
BLAST of mRNA_Ecto-sp13_S_contig17921.5468.1 vs. uniprot
Match: D7FME7_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME7_ECTSI)

HSP 1 Score: 504 bits (1299), Expect = 5.770e-160
Identity = 319/387 (82.43%), Postives = 330/387 (85.27%), Query Frame = 0
Query:    1 MFPNVAEEERTRDSDAGTAAQAXXXXXXXXXXVPAASNGSPPXXXXXXXPAALSVGPGVAAPGAVSSPSPALAPLSAHHNPLGSFPSRSPSPQAPATPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILDAVAGGSGLCPTGDQPRPDGSSVRRGSLLGLGPVDAVLIFDEGPPITTRTAXXXXXXXXXXXXXXSRAALTAALQSLLTLPQCARRSSAPRAIRSMSATGG-VAADENGRVDGGGVTTAAGRAEGENVVTVVRYVADGTIEETLEGEGDSGIGSLGAGVEGIVVRCSLEGKTFLNQGGAGSASASEGTEAISLSGTKRKAADXXXXXXXCNGADMLGADGKHWSEGAPPLRRTCPWSPVGVEDILVEEMVQVS 386
            MFPNVAEEE TR  DAGTAA AXXXXXXXXXX          XXXXXXX AALSVGPGVAA       SPALAPLSAHHNPLGSFPSRSP PQAP TPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAIL+AVAGGSGLCP G+QPRPDGSSVRRGSLLGLGP+DAVLIFDEGPPITTRT  XXXXXXXXXX   SRAAL AALQSLLTLP+CARRSSAPRAIRSM ATGG  AADENGRVDG            E+VVTVVRYVA+GTIEETLEGEGD GI SLGAG EGI VRCSLEGKTFL QG A SASASEGTEA+SLSGTKRKAAD XXXX  C+G DMLGA+GKHWSEGAPPLRRTCPWSPVGVEDILVEEMVQ++
Sbjct: 1399 MFPNVAEEESTRGVDAGTAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXX-AALSVGPGVAAXXXXXXXSPALAPLSAHHNPLGSFPSRSPFPQAPVTPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILEAVAGGSGLCPNGEQPRPDGSSVRRGSLLGLGPIDAVLIFDEGPPITTRTTAXXXXXXXXXXW--SRAALAAALQSLLTLPRCARRSSAPRAIRSMPATGGGAAADENGRVDGXXXXXXXXXXXXESVVTVVRYVANGTIEETLEGEGDKGISSLGAGGEGIAVRCSLEGKTFLKQGEAASASASEGTEAVSLSGTKRKAADGXXXXG-CSGVDMLGANGKHWSEGAPPLRRTCPWSPVGVEDILVEEMVQMN 1781          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17921.5468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI88_9PHAE2.860e-16467.80Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
D7FME7_ECTSI5.770e-16082.43Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17921contigEcto-sp13_S_contig17921:12..3106 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17921.5468.1mRNA_Ecto-sp13_S_contig17921.5468.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17921 12..3118 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17921.5468.1 ID=prot_Ecto-sp13_S_contig17921.5468.1|Name=mRNA_Ecto-sp13_S_contig17921.5468.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=386bp
MFPNVAEEERTRDSDAGTAAQAAAAAATAATSVPAASNGSPPGAPAAAPP
AALSVGPGVAAPGAVSSPSPALAPLSAHHNPLGSFPSRSPSPQAPATPPK
PAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILDAVAGGSGLCPTGDQP
RPDGSSVRRGSLLGLGPVDAVLIFDEGPPITTRTATATATATATAATSSS
RAALTAALQSLLTLPQCARRSSAPRAIRSMSATGGVAADENGRVDGGGVT
TAAGRAEGENVVTVVRYVADGTIEETLEGEGDSGIGSLGAGVEGIVVRCS
LEGKTFLNQGGAGSASASEGTEAISLSGTKRKAADGGGGGGGCNGADMLG
ADGKHWSEGAPPLRRTCPWSPVGVEDILVEEMVQVS
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