mRNA_Ecto-sp13_S_contig1789.5449.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: D7FN52_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN52_ECTSI) HSP 1 Score: 315 bits (808), Expect = 6.590e-102 Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 1
Query: 1 ALVAAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
ALVAAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAA SSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK
Sbjct: 443 ALVAAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAASSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 610
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: A0A7S3YDN6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YDN6_HETAK) HSP 1 Score: 128 bits (321), Expect = 2.540e-32 Identity = 76/140 (54.29%), Postives = 86/140 (61.43%), Query Frame = 1
Query: 55 AWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFK 474
AW E ELS LAKA+ KFPAGSQNRW IS FIA + SKE+CI KYQ++ AP K VAA A PS R EDVW+Q QQ LE L + P MDKNERW++ISA V GK+KKQCVERFK
Sbjct: 124 AWSEEELSCLAKAVQKFPAGSQNRWLTISNFIAHMVHTER--SKEECIQKYQEIQTAPGSKPKAGGTKVAA---GAXXXXXXXGPSARASEEDVWTQDQQAALEEGLKKHPASMDKNERWSAISAGVEGKTKKQCVERFK 258
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: B7G4P2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4P2_PHATC) HSP 1 Score: 117 bits (293), Expect = 3.150e-27 Identity = 68/152 (44.74%), Postives = 88/152 (57.89%), Query Frame = 1
Query: 58 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQL---HAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
W + ELS+LAKA+ K+P G +RWE I+ F+ + +P SKE+CI KY + H+ P VA A S PE S + EDVW+ Q QQL+ LA P MDKNERW +I+ VPGKSKKQCV+RFK ++ L KK
Sbjct: 433 WTKEELSALAKAVKKYPPGGSSRWEQIALFVNNLCKQDEPRSKEECIEKYNNVAKTHSKPTESTNGVAAA-----------SEPENSS--QSNEDVWTAEQDQQLQDGLAANPASMDKNERWTAITECVPGKSKKQCVQRFKVIRDALKKKK 571
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: W7TYH1_9STRA (Subfamily c member 2 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYH1_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.090e-24 Identity = 70/175 (40.00%), Postives = 96/175 (54.86%), Query Frame = 1
Query: 1 ALVAAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVA-APSSSANARSAPERPSRREPRE------DVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
A +A+ G + ++ AW E EL LAKA+V+FPAG+Q RW+ I+ ++ R SKE+CI +YQ + A + + V A A A S +S SR E D WSQ QQ+QLE L +P M+KNERW IS V GKSKK+C ER+K ++ + KK
Sbjct: 492 AHASAEKDGGEESSPKEAAWTEEELGVLAKAVVRFPAGTQKRWQCIADYLNHMVRGASLRSKEECIKQYQVVQAGVSKSRVVAATGGAGAGGGSEGRKSGKTGTSRGEDNGKAVASGDGWSQEQQKQLEAGLVTYPASMEKNERWKRISEGVQGKSKKECAERYKALRAAVAKKK 666
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: K0SEK9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEK9_THAOC) HSP 1 Score: 107 bits (266), Expect = 1.760e-23 Identity = 60/149 (40.27%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 58 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
W + EL++LAKA+ K+PAG NRWE I+ FI + +DP KE+CIA++ ++ ++P+ PA A +A + E D W+ AQ L+ L ++P MDKNERW+ I+ V GKSKKQCV RFK ++ + KK
Sbjct: 504 WTKEELAALAKAVKKYPAGGANRWESIALFINNLCKQQDPRGKEECIAQFNKVTSSPS-------PAAAPGGKEDDAGKSAEAG-------DEWTDAQDAALQDMLRKYPASMDKNERWSKIAEGVEGKSKKQCVGRFKAIREAVKGKK 638
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: B8BZ84_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ84_THAPS) HSP 1 Score: 106 bits (265), Expect = 1.790e-23 Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 1
Query: 58 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVK 483
W ++EL +LAKA+ K+PAG NRWE I+ F+ + +P SKE+CI KY + A+ A P AA + A W++ Q L+ L ++P MDKNERW SI+ VPG+SKK+CV+RFK ++
Sbjct: 388 WTKDELGALAKAVKKYPAGGSNRWEAIALFVNNLCKQAEPRSKEECIEKYNSIAASAAPPSGSTDKDTAADGEDSGA---------------PWTEEQDSLLQEMLRKYPADMDKNERWKSIAKGVPGRSKKECVDRFKAIR 514
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: A0A7S2PG91_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PG91_9STRA) HSP 1 Score: 106 bits (264), Expect = 3.610e-23 Identity = 53/142 (37.32%), Postives = 82/142 (57.75%), Query Frame = 1
Query: 58 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVK 483
W ++EL++L+KAI K+PAG RW+ I+ FI + ++P +KE+CI KY + +APA + APA + W++ + L+ L ++P M+KNERW SI+ VPG+SKK+CVERFK ++
Sbjct: 503 WTKDELAALSKAIKKYPAGGAARWDAIASFINNLCKQEEPRTKEECIEKYNLIASAPAAKDTIAAPAD----------------------DKAWTEKEDTLLQDMLRKYPASMEKNERWKSIAEGVPGRSKKECVERFKAIR 622
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: A0A7S2SB83_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SB83_9STRA) HSP 1 Score: 105 bits (262), Expect = 5.530e-23 Identity = 66/163 (40.49%), Postives = 96/163 (58.90%), Query Frame = 1
Query: 16 QLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
Q ++ RE + W +ELSSLAKA+ KFP G++NRW + +++ + ++EDCI + ++ A+ +K + + AA + + P E VWS QQ LE AL +FP MDKNERW SI+AAV GKSKK+CV RFK ++ ++LAKK
Sbjct: 426 QKRLEKKREKQFAPWSADELSSLAKAMKKFPGGTRNRWMMVCKYLNTIPGSTVERTQEDCI-QQSKIMASDTEKRKDLGTSKAA---------FDQFQKKLAPSEAVWSNEQQAALEAALKKFPASMDKNERWKSIAAAVEGKSKKECVARFKELRAKVLAKK 578
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: A0A1E7FW12_9STRA (DnaJ-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW12_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.490e-22 Identity = 61/145 (42.07%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 70 ELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
E+S+L+K + KFPAG NRW+ IS +I R DP +KE+CI + +++ A G Q A S DVW+ Q QQL+ L FP ++KNERW+SIS V GKSKK+CVERFK ++ L AKK
Sbjct: 430 EMSALSKGVKKFPAGGGNRWDQISHYINNVCRPDDPRTKEECIEIFNKVNKA--GKQLPNGNTSHAVDDS-----------------DVWNSEQDQQLQKGLTMFPSSIEKNERWSSISDEVTGKSKKECVERFKAIRDALKAKK 555
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: A0A1Z5JZ63_FISSO (DnaJ homolog subfamily C member 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZ63_FISSO) HSP 1 Score: 100 bits (249), Expect = 3.020e-21 Identity = 57/149 (38.26%), Postives = 78/149 (52.35%), Query Frame = 1
Query: 58 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
W + E+S+LAK I KFPAG NRW+ I+ ++ R P ++++CI KY L V P + A+ W+ Q QQL+ L +FP MDKNERWASI+ V GKSKK CV+RFK ++ L +K
Sbjct: 419 WSQEEMSALAKGIKKFPAGGANRWDQIANYVNNLCRQDVPRTRQECIDKYNALARETKNTDSTT---VEEPKNGAD----------NGDENSEWTAEQDQQLQDGLTKFPATMDKNERWASIAKGVTGKSKKDCVQRFKAIREALKNRK 554 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1789.5449.1 >prot_Ecto-sp13_S_contig1789.5449.1 ID=prot_Ecto-sp13_S_contig1789.5449.1|Name=mRNA_Ecto-sp13_S_contig1789.5449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=184bp MGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDback to top mRNA from alignment at Ecto-sp13_S_contig1789:4547..5622- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1789.5449.1 ID=mRNA_Ecto-sp13_S_contig1789.5449.1|Name=mRNA_Ecto-sp13_S_contig1789.5449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1076bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1789:4547..5622- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1789:4547..5622- >mRNA_Ecto-sp13_S_contig1789.5449.1 ID=mRNA_Ecto-sp13_S_contig1789.5449.1|Name=mRNA_Ecto-sp13_S_contig1789.5449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=552bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1789:4547..5622- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |