mRNA_Ecto-sp13_S_contig1789.5449.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1789.5449.1
Unique NamemRNA_Ecto-sp13_S_contig1789.5449.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: D7FN52_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN52_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 6.590e-102
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 1
Query:    1 ALVAAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
            ALVAAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAA SSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK
Sbjct:  443 ALVAAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAASSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 610          
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: A0A7S3YDN6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YDN6_HETAK)

HSP 1 Score: 128 bits (321), Expect = 2.540e-32
Identity = 76/140 (54.29%), Postives = 86/140 (61.43%), Query Frame = 1
Query:   55 AWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFK 474
            AW E ELS LAKA+ KFPAGSQNRW  IS FIA     +   SKE+CI KYQ++  AP    K     VAA    A        PS R   EDVW+Q QQ  LE  L + P  MDKNERW++ISA V GK+KKQCVERFK
Sbjct:  124 AWSEEELSCLAKAVQKFPAGSQNRWLTISNFIAHMVHTER--SKEECIQKYQEIQTAPGSKPKAGGTKVAA---GAXXXXXXXGPSARASEEDVWTQDQQAALEEGLKKHPASMDKNERWSAISAGVEGKTKKQCVERFK 258          
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: B7G4P2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4P2_PHATC)

HSP 1 Score: 117 bits (293), Expect = 3.150e-27
Identity = 68/152 (44.74%), Postives = 88/152 (57.89%), Query Frame = 1
Query:   58 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQL---HAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
            W + ELS+LAKA+ K+P G  +RWE I+ F+    +  +P SKE+CI KY  +   H+ P      VA A           S PE  S  +  EDVW+  Q QQL+  LA  P  MDKNERW +I+  VPGKSKKQCV+RFK ++  L  KK
Sbjct:  433 WTKEELSALAKAVKKYPPGGSSRWEQIALFVNNLCKQDEPRSKEECIEKYNNVAKTHSKPTESTNGVAAA-----------SEPENSS--QSNEDVWTAEQDQQLQDGLAANPASMDKNERWTAITECVPGKSKKQCVQRFKVIRDALKKKK 571          
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: W7TYH1_9STRA (Subfamily c member 2 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYH1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.090e-24
Identity = 70/175 (40.00%), Postives = 96/175 (54.86%), Query Frame = 1
Query:    1 ALVAAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVA-APSSSANARSAPERPSRREPRE------DVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
            A  +A+   G +   ++ AW E EL  LAKA+V+FPAG+Q RW+ I+ ++    R     SKE+CI +YQ + A  +  + V A   A A   S   +S     SR E         D WSQ QQ+QLE  L  +P  M+KNERW  IS  V GKSKK+C ER+K ++  +  KK
Sbjct:  492 AHASAEKDGGEESSPKEAAWTEEELGVLAKAVVRFPAGTQKRWQCIADYLNHMVRGASLRSKEECIKQYQVVQAGVSKSRVVAATGGAGAGGGSEGRKSGKTGTSRGEDNGKAVASGDGWSQEQQKQLEAGLVTYPASMEKNERWKRISEGVQGKSKKECAERYKALRAAVAKKK 666          
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: K0SEK9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEK9_THAOC)

HSP 1 Score: 107 bits (266), Expect = 1.760e-23
Identity = 60/149 (40.27%), Postives = 87/149 (58.39%), Query Frame = 1
Query:   58 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
            W + EL++LAKA+ K+PAG  NRWE I+ FI    + +DP  KE+CIA++ ++ ++P+       PA A      +A  + E         D W+ AQ   L+  L ++P  MDKNERW+ I+  V GKSKKQCV RFK ++  +  KK
Sbjct:  504 WTKEELAALAKAVKKYPAGGANRWESIALFINNLCKQQDPRGKEECIAQFNKVTSSPS-------PAAAPGGKEDDAGKSAEAG-------DEWTDAQDAALQDMLRKYPASMDKNERWSKIAEGVEGKSKKQCVGRFKAIREAVKGKK 638          
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: B8BZ84_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ84_THAPS)

HSP 1 Score: 106 bits (265), Expect = 1.790e-23
Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 1
Query:   58 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVK 483
            W ++EL +LAKA+ K+PAG  NRWE I+ F+    +  +P SKE+CI KY  + A+ A P        AA    + A                W++ Q   L+  L ++P  MDKNERW SI+  VPG+SKK+CV+RFK ++
Sbjct:  388 WTKDELGALAKAVKKYPAGGSNRWEAIALFVNNLCKQAEPRSKEECIEKYNSIAASAAPPSGSTDKDTAADGEDSGA---------------PWTEEQDSLLQEMLRKYPADMDKNERWKSIAKGVPGRSKKECVDRFKAIR 514          
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: A0A7S2PG91_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PG91_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.610e-23
Identity = 53/142 (37.32%), Postives = 82/142 (57.75%), Query Frame = 1
Query:   58 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVK 483
            W ++EL++L+KAI K+PAG   RW+ I+ FI    + ++P +KE+CI KY  + +APA    + APA                       +  W++ +   L+  L ++P  M+KNERW SI+  VPG+SKK+CVERFK ++
Sbjct:  503 WTKDELAALSKAIKKYPAGGAARWDAIASFINNLCKQEEPRTKEECIEKYNLIASAPAAKDTIAAPAD----------------------DKAWTEKEDTLLQDMLRKYPASMEKNERWKSIAEGVPGRSKKECVERFKAIR 622          
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: A0A7S2SB83_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SB83_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.530e-23
Identity = 66/163 (40.49%), Postives = 96/163 (58.90%), Query Frame = 1
Query:   16 QLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
            Q ++   RE +   W  +ELSSLAKA+ KFP G++NRW  + +++     +    ++EDCI +  ++ A+    +K +  + AA           +   +  P E VWS  QQ  LE AL +FP  MDKNERW SI+AAV GKSKK+CV RFK ++ ++LAKK
Sbjct:  426 QKRLEKKREKQFAPWSADELSSLAKAMKKFPGGTRNRWMMVCKYLNTIPGSTVERTQEDCI-QQSKIMASDTEKRKDLGTSKAA---------FDQFQKKLAPSEAVWSNEQQAALEAALKKFPASMDKNERWKSIAAAVEGKSKKECVARFKELRAKVLAKK 578          
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: A0A1E7FW12_9STRA (DnaJ-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW12_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.490e-22
Identity = 61/145 (42.07%), Postives = 81/145 (55.86%), Query Frame = 1
Query:   70 ELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
            E+S+L+K + KFPAG  NRW+ IS +I    R  DP +KE+CI  + +++ A  G Q        A   S                 DVW+  Q QQL+  L  FP  ++KNERW+SIS  V GKSKK+CVERFK ++  L AKK
Sbjct:  430 EMSALSKGVKKFPAGGGNRWDQISHYINNVCRPDDPRTKEECIEIFNKVNKA--GKQLPNGNTSHAVDDS-----------------DVWNSEQDQQLQKGLTMFPSSIEKNERWSSISDEVTGKSKKECVERFKAIRDALKAKK 555          
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Match: A0A1Z5JZ63_FISSO (DnaJ homolog subfamily C member 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZ63_FISSO)

HSP 1 Score: 100 bits (249), Expect = 3.020e-21
Identity = 57/149 (38.26%), Postives = 78/149 (52.35%), Query Frame = 1
Query:   58 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 504
            W + E+S+LAK I KFPAG  NRW+ I+ ++    R   P ++++CI KY  L              V  P + A+                 W+  Q QQL+  L +FP  MDKNERWASI+  V GKSKK CV+RFK ++  L  +K
Sbjct:  419 WSQEEMSALAKGIKKFPAGGANRWDQIANYVNNLCRQDVPRTRQECIDKYNALARETKNTDSTT---VEEPKNGAD----------NGDENSEWTAEQDQQLQDGLTKFPATMDKNERWASIAKGVTGKSKKDCVQRFKAIREALKNRK 554          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1789.5449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN52_ECTSI6.590e-10299.40Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A7S3YDN6_HETAK2.540e-3254.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B7G4P2_PHATC3.150e-2744.74Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
W7TYH1_9STRA2.090e-2440.00Subfamily c member 2 protein n=3 Tax=Monodopsidace... [more]
K0SEK9_THAOC1.760e-2340.27Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8BZ84_THAPS1.790e-2339.44Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2PG91_9STRA3.610e-2337.32Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2SB83_9STRA5.530e-2340.49Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A1E7FW12_9STRA2.490e-2242.07DnaJ-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A1Z5JZ63_FISSO3.020e-2138.26DnaJ homolog subfamily C member 2 n=2 Tax=Fistulif... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1789contigEcto-sp13_S_contig1789:4547..5622 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score304.3
Seed ortholog evalue3.9e-80
Seed eggNOG ortholog2880.D7FN52
Model size576
KEGG koko:K09522
Hectar predicted targeting categoryother localisation
GOsGO:0000082,GO:0000122,GO:0000278,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0000988,GO:0000989,GO:0001012,GO:0001067,GO:0001076,GO:0001077,GO:0001134,GO:0001135,GO:0001228,GO:0001701,GO:0001775,GO:0002376,GO:0002520,GO:0002521,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006325,GO:0006338,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006996,GO:0007049,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0016043,GO:0016070,GO:0017145,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019904,GO:0022402,GO:0022407,GO:0022409,GO:0030001,GO:0030097,GO:0030098,GO:0030099,GO:0030154,GO:0030155,GO:0030183,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032774,GO:0033043,GO:0033044,GO:0034097,GO:0034641,GO:0034645,GO:0034654,GO:0035295,GO:0042113,GO:0042221,GO:0042592,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043370,GO:0043372,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045321,GO:0045580,GO:0045582,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045622,GO:0045624,GO:0045785,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046634,GO:0046635,GO:0046637,GO:0046638,GO:0046649,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048536,GO:0048538,GO:0048565,GO:0048566,GO:0048568,GO:0048583,GO:0048584,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048872,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051249,GO:0051251,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051301,GO:0051569,GO:0051570,GO:0051571,GO:0051574,GO:0051716,GO:0055123,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0070741,GO:0070838,GO:0070887,GO:0071310,GO:0071345,GO:0071354,GO:0071704,GO:0071840,GO:0071987,GO:0072511,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902105,GO:1902107,GO:1902275,GO:1902679,GO:1902680,GO:1903037,GO:1903039,GO:1903047,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1903708,GO:1905269,GO:1990823,GO:1990830,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000514,GO:2000516,GO:2001141,GO:2001252
Exons3
EggNOG free text desc.ubiquitin modification-dependent histone binding
EggNOG OGsKOG0724@1,KOG0724@2759
Ec32 ortholog descriptionDnaJ (Hsp40) and SANT/Myb domain transcription factor
Ec32 orthologEc-06_008420.1
Cds size552
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462925.8885584-CDS-Ecto-sp13_S_contig1789:4546..47951681462925.8885584-CDS-Ecto-sp13_S_contig1789:4546..4795Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1789 4547..4795 -
1681462925.902176-CDS-Ecto-sp13_S_contig1789:5000..52031681462925.902176-CDS-Ecto-sp13_S_contig1789:5000..5203Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1789 5001..5203 -
1681462925.9101212-CDS-Ecto-sp13_S_contig1789:5498..55981681462925.9101212-CDS-Ecto-sp13_S_contig1789:5498..5598Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1789 5499..5598 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462925.9183302-UTR-Ecto-sp13_S_contig1789:5598..56221681462925.9183302-UTR-Ecto-sp13_S_contig1789:5598..5622Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1789 5599..5622 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1789.5449.1prot_Ecto-sp13_S_contig1789.5449.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1789 4547..5598 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1789.5449.1

>prot_Ecto-sp13_S_contig1789.5449.1 ID=prot_Ecto-sp13_S_contig1789.5449.1|Name=mRNA_Ecto-sp13_S_contig1789.5449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=184bp
MGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKD
PFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAPSSSANARSAPERPSRREP
REDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFK
FVKTQLLAKKKAEKKAAEAAAANGGAEAAAAKK*
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mRNA from alignment at Ecto-sp13_S_contig1789:4547..5622-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1789.5449.1 ID=mRNA_Ecto-sp13_S_contig1789.5449.1|Name=mRNA_Ecto-sp13_S_contig1789.5449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1076bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1789:4547..5622- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGCTGGTTGCGGCGCAACTCAAGATGGGGTCTGACCGTGAGTCACGCAA GCGGGCATGGGAAGAAAATGAGCTGTCGTCCCTTGCAAAAGCCATCGTCA AGTTCCCCGCAGGGTCTCAAAACCGTGAGTTTGTTTTGTTTTGCGCAGCT CCTTATTACGCGTGACACATGGCGTGTTCATCTGCTTGGTTTGTTTGATG GATGTACCGAAGTGTTCGTGATGGACCGCACTCAAAGGGAGGATTGGCGC TGAAGGTTATTTGTTGCACTCGTGATCCATAGCGCGCTTCCTGCTCAAGA GTAGTATCAACATGGGTAACAAGTGGGTCAAACAATAAATAGCCGTTGTA CATAAAATCCAACGTCGATGAAGACCACTACACGTTCTTGATGTCGACGG GCGTTTAATGTCGGCGTAGGTTGGGAGCACATCTCGCAGTTCATCGCTCA GGCAACGCGCGCCAAGGATCCCTTCAGCAAGGAGGACTGCATCGCCAAGT ACCAGCAGCTACATGCTGCTCCTGCAGGGCCTCAGAAGGTCGTGGCTCCA GCGGTGGCGGCTCCTTCCTCTTCGGCAAACGCAAGATCTGCGCCGGAGCG ACCTTCTCGCCGAGAACCTAGGGTGAGCGCCTTTGTGTTTGCGTCGTGGT AATGCGTGGCACAGATTCTGCATTTGCTTCGTAGCGTTGCGATTGCTTGC ATTCTGGAACGGTTCCATCAAGTTGTGTCTACGTGTCTACTGGTGAACGT AAATCCTTCAAATCATGGACAAAAATCAAGAAACAAACCAACAACGTGTT GGATACCGAAAACACCCTCTGAAACAGGAGGACGTGTGGAGCCAAGCCCA GCAGCAGCAGCTCGAGACCGCGCTGGCCCGCTTCCCGATGGGCATGGATA AGAACGAGAGGTGGGCTTCCATCTCCGCCGCGGTCCCCGGCAAGAGCAAG AAACAGTGCGTCGAGCGCTTCAAGTTCGTCAAGACTCAACTTCTCGCCAA GAAGAAGGCGGAAAAGAAGGCGGCAGAGGCGGCCGCGGCAAATGGGGGAG CGGAGGCAGCAGCTGCAAAAAAGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1789:4547..5622-

>mRNA_Ecto-sp13_S_contig1789.5449.1 ID=mRNA_Ecto-sp13_S_contig1789.5449.1|Name=mRNA_Ecto-sp13_S_contig1789.5449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=552bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1789:4547..5622- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGTCTGACCGTGAGTCACGCAAGCGGGCATGGGAAGAAAATGAGCT
GTCGTCCCTTGCAAAAGCCATCGTCAAGTTCCCCGCAGGGTCTCAAAACC
GTTGGGAGCACATCTCGCAGTTCATCGCTCAGGCAACGCGCGCCAAGGAT
CCCTTCAGCAAGGAGGACTGCATCGCCAAGTACCAGCAGCTACATGCTGC
TCCTGCAGGGCCTCAGAAGGTCGTGGCTCCAGCGGTGGCGGCTCCTTCCT
CTTCGGCAAACGCAAGATCTGCGCCGGAGCGACCTTCTCGCCGAGAACCT
AGGGAGGACGTGTGGAGCCAAGCCCAGCAGCAGCAGCTCGAGACCGCGCT
GGCCCGCTTCCCGATGGGCATGGATAAGAACGAGAGGTGGGCTTCCATCT
CCGCCGCGGTCCCCGGCAAGAGCAAGAAACAGTGCGTCGAGCGCTTCAAG
TTCGTCAAGACTCAACTTCTCGCCAAGAAGAAGGCGGAAAAGAAGGCGGC
AGAGGCGGCCGCGGCAAATGGGGGAGCGGAGGCAGCAGCTGCAAAAAAGT
AG
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