prot_Ecto-sp13_S_contig17855.5430.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17855.5430.1 vs. uniprot
Match: A0A6H5KEK1_9PHAE (Tudor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK1_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.780e-33 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
Query: 1 DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKII 55
DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKII
Sbjct: 139 DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKII 193
BLAST of mRNA_Ecto-sp13_S_contig17855.5430.1 vs. uniprot
Match: A0A7S2UU23_9STRA (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU23_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.060e-21 Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query: 1 DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGS-MTMGKWVRKII 55
DSP+IRAIGFLYLRYT PPK LW W+EP++DDEEE PSP S MTMG++V+KI+
Sbjct: 43 DSPYIRAIGFLYLRYTHPPKLLWDWIEPFLDDEEEITPSPDPSSKMTMGQYVQKIV 98
BLAST of mRNA_Ecto-sp13_S_contig17855.5430.1 vs. uniprot
Match: A0A061RVA8_9CHLO (Pre-mRNA-splicing factor 38 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RVA8_9CHLO) HSP 1 Score: 85.1 bits (209), Expect = 4.190e-19 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 1 DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKII 55
DSP+IRA+GFL LRY C PKE+W W+ Y+DD EEFKPSP S+TMG ++R ++
Sbjct: 88 DSPYIRAVGFLLLRYICNPKEIWSWVSSYVDDPEEFKPSPYGASITMGAFLRDLL 142
BLAST of mRNA_Ecto-sp13_S_contig17855.5430.1 vs. uniprot
Match: A0A1V9Z9B0_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9B0_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.130e-18 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0
Query: 1 DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMT-MGKWVRKII 55
DSP+IR IGFLYLRY C P+ELW W EPY+DDEEEF S + +T MG WVR ++
Sbjct: 129 DSPYIRCIGFLYLRYVCDPEELWSWYEPYLDDEEEFNASANDKILTTMGAWVRSLL 184
BLAST of mRNA_Ecto-sp13_S_contig17855.5430.1 vs. uniprot
Match: A0A1U8Q576_NELNU (Pre-mRNA-splicing factor 38 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8Q576_NELNU) HSP 1 Score: 82.8 bits (203), Expect = 2.800e-18 Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 0
Query: 1 DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKII 55
DSP+IRAIGFLYLRY PK LWGW EPY+ DEEEF P TMG +VR ++
Sbjct: 90 DSPYIRAIGFLYLRYAADPKTLWGWFEPYVKDEEEFSPGSNGRVTTMGAYVRDLL 144
BLAST of mRNA_Ecto-sp13_S_contig17855.5430.1 vs. uniprot
Match: UPI001CB94151 (pre-mRNA splicing factor SR-like 1 isoform X4 n=4 Tax=Asteraceae TaxID=4210 RepID=UPI001CB94151) HSP 1 Score: 81.6 bits (200), Expect = 3.280e-18 Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0
Query: 1 DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKII 55
DSP+IRA+GFLYLRY PK LWGW EPY+ D+EEF P TMG +VR ++
Sbjct: 88 DSPYIRAVGFLYLRYAADPKSLWGWFEPYIKDDEEFSPGSNGRMTTMGVYVRDLL 142
BLAST of mRNA_Ecto-sp13_S_contig17855.5430.1 vs. uniprot
Match: A0A1U8QCF3_NELNU (Pre-mRNA-splicing factor 38 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8QCF3_NELNU) HSP 1 Score: 82.4 bits (202), Expect = 3.340e-18 Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 0
Query: 1 DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKII 55
DSP+IRAIGFLYLRY PK LWGW EPY+ DEEEF P TMG ++R ++
Sbjct: 90 DSPYIRAIGFLYLRYAADPKTLWGWFEPYLKDEEEFSPGSNGRVTTMGVYIRDLL 144
BLAST of mRNA_Ecto-sp13_S_contig17855.5430.1 vs. uniprot
Match: A0A1U8QAW9_NELNU (Pre-mRNA-splicing factor 38 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8QAW9_NELNU) HSP 1 Score: 82.4 bits (202), Expect = 3.560e-18 Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 0
Query: 1 DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKII 55
DSP+IRAIGFLYLRY PK LWGW EPY+ DEEEF P TMG ++R ++
Sbjct: 90 DSPYIRAIGFLYLRYAADPKTLWGWFEPYLKDEEEFSPGSNGRVTTMGVYIRDLL 144
BLAST of mRNA_Ecto-sp13_S_contig17855.5430.1 vs. uniprot
Match: A0A2P6UZR9_9CHLO (Pre-mRNA-splicing factor 38 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZR9_9CHLO) HSP 1 Score: 85.1 bits (209), Expect = 4.020e-18 Identity = 34/57 (59.65%), Postives = 46/57 (80.70%), Query Frame = 0
Query: 1 DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTE--GSMTMGKWVRKII 55
DSP+IRA+GFLYLRY C P++LW W +PYM DEEEF+PSP+ ++TMG++ R I+
Sbjct: 89 DSPYIRAVGFLYLRYVCDPRKLWNWFKPYMRDEEEFEPSPSGLGTTVTMGEYARDIL 145
BLAST of mRNA_Ecto-sp13_S_contig17855.5430.1 vs. uniprot
Match: A0A061RJ78_9CHLO (Pre-mRNA-splicing factor 38 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RJ78_9CHLO) HSP 1 Score: 85.1 bits (209), Expect = 4.140e-18 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 1 DSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKII 55
DSP+IRA+GFL LRY C PKE+W W+ Y+DD EEFKPSP S+TMG ++R ++
Sbjct: 88 DSPYIRAVGFLLLRYICNPKEIWSWVSSYVDDPEEFKPSPYGASITMGAFLRDLL 142 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17855.5430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig17855.5430.1 ID=prot_Ecto-sp13_S_contig17855.5430.1|Name=mRNA_Ecto-sp13_S_contig17855.5430.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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