mRNA_Ecto-sp13_S_contig17786.5393.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17786.5393.1 vs. uniprot
Match: D8LL87_ECTSI (Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL87_ECTSI) HSP 1 Score: 117 bits (294), Expect = 1.010e-29 Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 1
Query: 4 LSQTHPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 195
+ +THPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA
Sbjct: 203 IRKTHPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 266
BLAST of mRNA_Ecto-sp13_S_contig17786.5393.1 vs. uniprot
Match: A0A6H5KRY9_9PHAE (Zeta_toxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY9_9PHAE) HSP 1 Score: 113 bits (283), Expect = 6.480e-29 Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 1
Query: 4 LSQTHPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 195
+ + HP YRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA
Sbjct: 251 IRKNHPKYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 314
BLAST of mRNA_Ecto-sp13_S_contig17786.5393.1 vs. uniprot
Match: A0A835Z5H8_9STRA (Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5H8_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.180e-15 Identity = 43/65 (66.15%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 1 RLSQTHPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 195
R+ + HP Y IAILYV+AS E V RARRR EETGR VPEAEI DSL R P+ V L RADFVA
Sbjct: 223 RIREFHPHYSIAILYVYASRETVFSRARRRGEETGRHVPEAEILDSLERAPKAVRRLRDRADFVA 287
BLAST of mRNA_Ecto-sp13_S_contig17786.5393.1 vs. uniprot
Match: A0A7R9UHT2_DIALT (Hypothetical protein (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UHT2_DIALT) HSP 1 Score: 75.9 bits (185), Expect = 1.340e-14 Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 1 RLSQTHPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 195
++ + HP Y+IAILYV A EEQ+ R R+RAE TGR VPEAEI+DSL RVPR+VA L P A F+A
Sbjct: 271 QVRRDHPDYQIAILYVTADEEQIAARVRKRAELTGRHVPEAEIRDSLQRVPRSVAALAPCAHFLA 335
BLAST of mRNA_Ecto-sp13_S_contig17786.5393.1 vs. uniprot
Match: A0A8J6C1B1_DIALT (Zeta_toxin domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C1B1_DIALT) HSP 1 Score: 75.5 bits (184), Expect = 1.640e-14 Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 1 RLSQTHPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 195
R+ HP Y+IAI+YV A E + R RRA ETGR+VPE EI DSL RVPR++A L P+ADFVA
Sbjct: 226 RIRARHPDYQIAIVYVSADETTIRRRVARRAAETGRLVPETEIADSLLRVPRSIAQLAPQADFVA 290
BLAST of mRNA_Ecto-sp13_S_contig17786.5393.1 vs. uniprot
Match: A0A7S3AF24_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AF24_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 1.680e-14 Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 4 LSQTHPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 195
L Q HP YRIAI++V ASE+++LER RRRAE TGR VPEAE+ DS+ RVP +VA+L A F+A
Sbjct: 233 LKQRHPAYRIAIIHVVASEDEILERVRRRAEVTGRHVPEAEVIDSITRVPASVALLAQEAAFLA 296
BLAST of mRNA_Ecto-sp13_S_contig17786.5393.1 vs. uniprot
Match: R1DIP1_EMIHU (Zeta_toxin domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DIP1_EMIHU) HSP 1 Score: 71.2 bits (173), Expect = 5.300e-13 Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 1 RLSQTHPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 195
RL + HP Y IAI++V A+ + VLER +RRA TGR VPEAEI DSL RVP V +L PR DF+A
Sbjct: 210 RLRREHPDYSIAIVHVVATRQAVLERVKRRAAVTGRHVPEAEIDDSLVRVPPAVRLLAPRVDFLA 274
BLAST of mRNA_Ecto-sp13_S_contig17786.5393.1 vs. uniprot
Match: A0A7S0G7Z0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G7Z0_9RHOD) HSP 1 Score: 64.3 bits (155), Expect = 1.800e-10 Identity = 36/57 (63.16%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 25 YRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 195
YRIAILYVHA+ E V+ER R RAE+TGR V E ++ DSL RVP V L ADFVA
Sbjct: 258 YRIAILYVHATREVVMERVRMRAEKTGRYVREQDVNDSLKRVPLAVYELASEADFVA 314
BLAST of mRNA_Ecto-sp13_S_contig17786.5393.1 vs. uniprot
Match: A0A7S0QBV8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QBV8_9EUKA) HSP 1 Score: 62.4 bits (150), Expect = 8.570e-10 Identity = 32/65 (49.23%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 1 RLSQTHPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 195
+L +P Y+IA++ V AS++ + ER +RRA+ETGR VP AE+ DS+ RVP+TVA L +F+A
Sbjct: 256 QLRNKYPEYQIAVINVTASKDVIFERVKRRADETGRDVPTAEVLDSIERVPKTVAQLAGSLEFLA 320
BLAST of mRNA_Ecto-sp13_S_contig17786.5393.1 vs. uniprot
Match: R1DEY9_EMIHU (Zeta_toxin domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DEY9_EMIHU) HSP 1 Score: 61.2 bits (147), Expect = 1.740e-9 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 16 HPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVA 195
HP YR+AIL+V ASEEQ+ A ETGR V EAE++DSL RVPR+ L+P DF A
Sbjct: 178 HPAYRLAILHVTASEEQIF------ARETGRYVGEAEVRDSLERVPRSTRALVPLVDFSA 231 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17786.5393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17786.5393.1 >prot_Ecto-sp13_S_contig17786.5393.1 ID=prot_Ecto-sp13_S_contig17786.5393.1|Name=mRNA_Ecto-sp13_S_contig17786.5393.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp RLSQTHPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVback to top mRNA from alignment at Ecto-sp13_S_contig17786:3266..3460- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17786.5393.1 ID=mRNA_Ecto-sp13_S_contig17786.5393.1|Name=mRNA_Ecto-sp13_S_contig17786.5393.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=195bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17786:3266..3460- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17786:3266..3460- >mRNA_Ecto-sp13_S_contig17786.5393.1 ID=mRNA_Ecto-sp13_S_contig17786.5393.1|Name=mRNA_Ecto-sp13_S_contig17786.5393.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=195bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17786:3266..3460- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |