prot_Ecto-sp13_S_contig1777.5384.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1777.5384.1
Unique Nameprot_Ecto-sp13_S_contig1777.5384.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length567
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1777.5384.1 vs. uniprot
Match: D7FLJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ4_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 5.260e-26
Identity = 57/63 (90.48%), Postives = 58/63 (92.06%), Query Frame = 0 
Query:  132 IQSGASTWDEKRGKCVRLARYQRVLHVVWAALGVSIQHIVSWPGGVRRLTFLEDFNQDLRWVL 194
            +Q GASTWDEK G CVRLARYQRVLHVVWAALGVSIQ IVSWPGGVRRLTFLE FNQDLRWVL
Sbjct:    1 MQGGASTWDEKGGICVRLARYQRVLHVVWAALGVSIQRIVSWPGGVRRLTFLEGFNQDLRWVL 63
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BLAST of mRNA_Ecto-sp13_S_contig1777.5384.1 vs. uniprot
Match: A0A6H5JK24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK24_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 8.760e-25
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 0 
Query:  132 IQSGASTWDEKRGKCVRLARYQRVLHVVWAALGVSIQHIVSWPGGVRRLTFLEDFNQDLRWVL 194
            +Q GASTWDE+ G CVRLARYQRVLHVVWAALGVSIQ IVSWPGG  RLTFLEDF+QDLRWVL
Sbjct:    1 MQGGASTWDEEGGICVRLARYQRVLHVVWAALGVSIQRIVSWPGGEGRLTFLEDFDQDLRWVL 63
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1777.5384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLJ4_ECTSI5.260e-2690.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK24_9PHAE8.760e-2585.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 296..336
e-value: 4.9E-5
score: 23.4
coord: 252..294
e-value: 2.6E-4
score: 21.1
coord: 208..249
e-value: 1.3E-9
score: 38.1
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 174..337
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 329..422
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 329..422
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 384..556
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 384..556
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 174..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1777contigEcto-sp13_S_contig1777:9424..13124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1777.5384.1mRNA_Ecto-sp13_S_contig1777.5384.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1777 9322..14683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1777.5384.1 ID=prot_Ecto-sp13_S_contig1777.5384.1|Name=mRNA_Ecto-sp13_S_contig1777.5384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=567bp
MALHSTWCHNPVKSPTKEILAMKPSSPNPPSPTITSLAALQLAFASGYEG
HHQPQLVCLDTCNACRESVAIRLRLTDRMPPSLSALFFATPHVTIAGQQN
NKYIDENGNATATTTRGGILFVTPTSSPQLSIQSGASTWDEKRGKCVRLA
RYQRVLHVVWAALGVSIQHIVSWPGGVRRLTFLEDFNQDLRWVLWPEGLR
ELTFREGFNQPMEDVVFPKGLERLSLGADFNQDIQNASFPPALTFLSLGA
SFNHPLEGAELPKSLQRLVWGQLFDQPVERVRWPPALQSIAFGDAFNHPV
EQAEFPARVQSLQLGKAFDQQVERVAWPERLESLSFAHDFNHPVAEMSWP
EGVKEVSFGYNFDKPLSGVKWPSYLESVIFGFRYNKSLDNVTWPALCRSI
QLGESFNLPLHGISWPQGLLELDLGDDFNHPLEGVTLPAGLERLYLSVFF
NQPVVAVEWPEGLLELDFGLNFNMPIEGTSFPWGLQSVCFGRCFNQDVTR
VSWPGELTRIAFGRAFVGALEGDSWPPPKLEVLDLGSKFHAKHRIDESNL
RQGCQVFYLYVPGSDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP