prot_Ecto-sp13_S_contig17728.5368.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17728.5368.1
Unique Nameprot_Ecto-sp13_S_contig17728.5368.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length246
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig17728.5368.1 vs. uniprot
Match: Q8QNQ7_ESV1K (EsV-1-2 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ7_ESV1K)

HSP 1 Score: 412 bits (1060), Expect = 7.590e-144
Identity = 219/244 (89.75%), Postives = 226/244 (92.62%), Query Frame = 0 
Query:    2 QIDKDTSFNNMVEYFENGMPVSEHVLCRASALGRLDLFELAVEHGCVVSHKAVEVAARCGHLRIVEYIWYVGSLCTQCACTGASKGGQLDVLKCLFPGDKWLPDQLDTSRLLVRNAVVGGFLPIVKWAHEKGQELDSTLLGTAAVHGHFELVKYIHFKGLREYSIAAILHAALRGDLQTVKWLREKGYPWSDGICTLLARXXXXXXXXXXXXXXXXXGMLKISSVGPVIDEHVRTCLVEAGCPL 245
            QIDKDTS NNMVEYFENGMPVSEH   RAS LGRLDLFELAVEHGCV+SH  VEVAARCGHLRI+EYIWYVGSLC  CACTGAS GGQLDVLK LFPGDKW PDQLDTSRLLVRNAVVGGFLP+VKWAHEKGQELDS LLGTAAVHGHFELVKYIHFKGLREYSIAAILHAALRGDL+TVKWLRE+GYPWSDGIC LLARXXXXXXXXXXXXXXXXXGMLKI SVG VIDEH+RT LV+A CPL
Sbjct:   42 QIDKDTSLNNMVEYFENGMPVSEHPPFRASELGRLDLFELAVEHGCVISHGTVEVAARCGHLRIIEYIWYVGSLCPHCACTGASMGGQLDVLKWLFPGDKWFPDQLDTSRLLVRNAVVGGFLPVVKWAHEKGQELDSALLGTAAVHGHFELVKYIHFKGLREYSIAAILHAALRGDLRTVKWLREQGYPWSDGICMLLARXXXXXXXXXXXXXXXXXGMLKIGSVGHVIDEHMRTYLVDAQCPL 285
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17728.5368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNQ7_ESV1K7.590e-14489.75EsV-1-2 n=1 Tax=Ectocarpus siliculosus virus 1 (is... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 8..241
e-value: 2.4E-13
score: 51.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 27..219
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 25..96
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 25..96
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 112..216
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 112..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17728contigEcto-sp13_S_contig17728:1046..1783 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17728.5368.1mRNA_Ecto-sp13_S_contig17728.5368.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17728 1046..1783 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17728.5368.1 ID=prot_Ecto-sp13_S_contig17728.5368.1|Name=mRNA_Ecto-sp13_S_contig17728.5368.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=246bp
MQIDKDTSFNNMVEYFENGMPVSEHVLCRASALGRLDLFELAVEHGCVVS
HKAVEVAARCGHLRIVEYIWYVGSLCTQCACTGASKGGQLDVLKCLFPGD
KWLPDQLDTSRLLVRNAVVGGFLPIVKWAHEKGQELDSTLLGTAAVHGHF
ELVKYIHFKGLREYSIAAILHAALRGDLQTVKWLREKGYPWSDGICTLLA
RRGHLQALKYVRSHGCPWGMLKISSVGPVIDEHVRTCLVEAGCPL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf