mRNA_Ecto-sp13_S_contig17711.5360.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17711.5360.1 vs. uniprot
Match: D7G070_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G070_ECTSI) HSP 1 Score: 134 bits (337), Expect = 3.040e-38 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1
Query: 1 GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAKLKD 192
GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAKLKD
Sbjct: 143 GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAKLKD 206
BLAST of mRNA_Ecto-sp13_S_contig17711.5360.1 vs. uniprot
Match: A0A835Z0J8_9STRA (Monothiol glutaredoxin-5, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0J8_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.470e-28 Identity = 46/62 (74.19%), Postives = 57/62 (91.94%), Query Frame = 1
Query: 1 GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAKL 186
GV FSS+N+LDYP +REG+K FS+WPTIPQ+Y+ GEFVGGCDI+TQ+H+SG+LETMLKEA L
Sbjct: 122 GVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEAGL 183
BLAST of mRNA_Ecto-sp13_S_contig17711.5360.1 vs. uniprot
Match: A0A7S2HJB1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HJB1_9STRA) HSP 1 Score: 102 bits (253), Expect = 3.750e-26 Identity = 43/61 (70.49%), Postives = 54/61 (88.52%), Query Frame = 1
Query: 1 GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAK 183
GV FSSVNVLDYP +REG+K FSEWPTIPQLY+ GEF+GGCDI+T +H+SG+L+ +L+E K
Sbjct: 92 GVDFSSVNVLDYPQIREGVKKFSEWPTIPQLYIDGEFIGGCDIVTSMHESGELKEILEEKK 152
BLAST of mRNA_Ecto-sp13_S_contig17711.5360.1 vs. uniprot
Match: A0A354UZP6_9PROT (Glutaredoxin n=2 Tax=Acetobacteraceae TaxID=433 RepID=A0A354UZP6_9PROT) HSP 1 Score: 99.8 bits (247), Expect = 9.290e-26 Identity = 44/59 (74.58%), Postives = 53/59 (89.83%), Query Frame = 1
Query: 1 GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKE 177
GV F S NVL+ P LREGIK+FS+WPT+PQLYVKGEFVGGCDI+T++ QSG+LETM+KE
Sbjct: 45 GVPFQSANVLEDPELREGIKSFSQWPTVPQLYVKGEFVGGCDIVTEMFQSGELETMMKE 103
BLAST of mRNA_Ecto-sp13_S_contig17711.5360.1 vs. uniprot
Match: A0A7R9UER6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UER6_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.820e-25 Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 1 GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEA 180
GV F+SVNVLDYP LRE IK +S WPTIPQLYV GEF+GGCDI+TQ+HQSG+LE + KEA
Sbjct: 126 GVDFASVNVLDYPLLRECIKEYSSWPTIPQLYVNGEFIGGCDIVTQMHQSGELEELFKEA 185
BLAST of mRNA_Ecto-sp13_S_contig17711.5360.1 vs. uniprot
Match: A0A7R9ZLC7_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLC7_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.860e-25 Identity = 41/59 (69.49%), Postives = 53/59 (89.83%), Query Frame = 1
Query: 1 GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKE 177
GV FSSVNVLDYP +REG+K +SEWPTIPQLYV GEF+GGCDI+TQ+H++G+L+ + +E
Sbjct: 94 GVDFSSVNVLDYPQIREGVKKYSEWPTIPQLYVNGEFIGGCDIITQMHENGELKEVFEE 152
BLAST of mRNA_Ecto-sp13_S_contig17711.5360.1 vs. uniprot
Match: A0A7S1Z0Q3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z0Q3_9STRA) HSP 1 Score: 100 bits (248), Expect = 5.410e-25 Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 1
Query: 1 GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAK 183
G+ FSSVNVLDYP +REG+K FSEWPTIPQLY+ GEF+GGCDI+T +H+SG+L +L E K
Sbjct: 127 GIDFSSVNVLDYPQIREGVKKFSEWPTIPQLYINGEFIGGCDIVTSMHESGELAEILGEEK 187
BLAST of mRNA_Ecto-sp13_S_contig17711.5360.1 vs. uniprot
Match: A0A6G0XHZ8_9STRA (Glutaredoxin domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHZ8_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 5.490e-25 Identity = 41/59 (69.49%), Postives = 53/59 (89.83%), Query Frame = 1
Query: 1 GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKE 177
GVSF SVNVLD+P +REG+K FS+WPTIPQL+VKGEF+GGCDI+T +H+SG+LE + K+
Sbjct: 87 GVSFDSVNVLDHPEIREGVKEFSQWPTIPQLFVKGEFIGGCDIVTDMHKSGELEDLFKQ 145
BLAST of mRNA_Ecto-sp13_S_contig17711.5360.1 vs. uniprot
Match: A0A067BUX8_SAPPC (Glutaredoxin domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BUX8_SAPPC) HSP 1 Score: 98.6 bits (244), Expect = 7.580e-25 Identity = 42/58 (72.41%), Postives = 52/58 (89.66%), Query Frame = 1
Query: 1 GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLK 174
GVSF SVNVLD+P +REG+K FS+WPTIPQL+V GEFVGGCDI+T +H+SG+LE +LK
Sbjct: 87 GVSFDSVNVLDHPEIREGVKEFSQWPTIPQLFVNGEFVGGCDIITDMHKSGELEDLLK 144
BLAST of mRNA_Ecto-sp13_S_contig17711.5360.1 vs. uniprot
Match: K5ZL91_9PROT (Glutaredoxin n=1 Tax=Acidocella sp. MX-AZ02 TaxID=1214225 RepID=K5ZL91_9PROT) HSP 1 Score: 97.4 bits (241), Expect = 7.820e-25 Identity = 42/59 (71.19%), Postives = 54/59 (91.53%), Query Frame = 1
Query: 1 GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKE 177
GV+FSSVNVL+ P +R+GIK FS WPTIPQLYVKGEF+GGCDI+T+++QSG+L+T+L E
Sbjct: 45 GVAFSSVNVLEDPEIRDGIKQFSNWPTIPQLYVKGEFIGGCDIVTEMYQSGELQTLLTE 103 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17711.5360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17711.5360.1 >prot_Ecto-sp13_S_contig17711.5360.1 ID=prot_Ecto-sp13_S_contig17711.5360.1|Name=mRNA_Ecto-sp13_S_contig17711.5360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp GVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSback to top mRNA from alignment at Ecto-sp13_S_contig17711:1376..1976+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17711.5360.1 ID=mRNA_Ecto-sp13_S_contig17711.5360.1|Name=mRNA_Ecto-sp13_S_contig17711.5360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=601bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17711:1376..1976+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17711:1376..1976+ >mRNA_Ecto-sp13_S_contig17711.5360.1 ID=mRNA_Ecto-sp13_S_contig17711.5360.1|Name=mRNA_Ecto-sp13_S_contig17711.5360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=195bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17711:1376..1976+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |